CN185674
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_DICDI (Homogentisate 1,2-dioxygenase OS=Dictyostelium discoideum GN=hgd PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.079e-55 Identity = 110/197 (55.84%), Postives = 139/197 (70.56%), Query Frame = 1 Query: 97 DLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDI-PDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 D Y+SGFGNSF SEAI G LP+G+N+P CP LYAEQ+SG +FT+PR QRSWLYRI+PS H P K P LV D +N + P QLRWKP I D P DF++GL TI GAG + +RHG AIH+YTA KSM+N +F N+DGDFL+VPQ+G L I TE G ++V GEI V+ +G F+V++ +GP+RG Sbjct: 7 DYEYQSGFGNSFESEAIKGTLPKGRNAPQNCPLDLYAEQLSGNAFTAPRHTQQRSWLYRIRPSVCHTPLK---PIDSGLVC--DLNNLHVDPNQLRWKPFPITEDKPHDFVEGLITIAGAGHASVRHGLAIHIYTATKSMENKSFYNSDGDFLIVPQQGTLDIQTEFGFMKVKSGEICVIQRGITFSVNV-EGPTRG 197
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_BORPE (Homogentisate 1,2-dioxygenase OS=Bordetella pertussis GN=hmgA PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 5.354e-55 Identity = 103/195 (52.82%), Postives = 140/195 (71.79%), Query Frame = 1 Query: 100 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 L+Y++GFGN+ ++EA+ GALP G+NSP +CP+GLYAEQ+SGT+FT+PR N+RSWLYRI+P H PF P A + +S+F + TP QLRW P+ +PD+PTDFIDG++T G G + G IH+Y AN+SM F NADG+ L+VPQ+GRL +ATE G +++ P EIAV+P+G R V L D +RG Sbjct: 3 LHYQTGFGNACATEALPGALPAGRNSPQICPYGLYAEQLSGTAFTAPRAENRRSWLYRIRPGVQHLPFAPFAGAQ-RWLSDFGRQP--VTPNQLRWSPLPMPDAPTDFIDGMHTWGGNGGPEEQSGVGIHLYAANRSMQGRFFYNADGEMLIVPQQGRLRLATELGLIDIEPYEIAVVPRGVRLRVELLDDVARG 194
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_BORPA (Homogentisate 1,2-dioxygenase OS=Bordetella parapertussis GN=hmgA PE=3 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 6.993e-55 Identity = 103/195 (52.82%), Postives = 139/195 (71.28%), Query Frame = 1 Query: 100 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 L Y++GFGN+ ++EA+ GALP G+NSP +CP+GLYAEQ+SGT+FT+PR N+RSWLYRI+P H PF P A + +S+F + TP QLRW P+ +PD+PTDFIDG++T G G + G IH+Y AN+SM F NADG+ L+VPQ+GRL +ATE G +++ P EIAV+P+G R V L D +RG Sbjct: 3 LQYQTGFGNACATEALPGALPAGRNSPQICPYGLYAEQLSGTAFTAPRAENRRSWLYRIRPGVQHLPFAPFAGAQ-RWLSDFGRQP--VTPNQLRWSPLPMPDAPTDFIDGMHTWGGNGGPEEQSGVGIHLYAANRSMQGRFFYNADGEMLIVPQQGRLRLATELGLIDIEPYEIAVVPRGVRLRVELLDDVARG 194
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_BORBR (Homogentisate 1,2-dioxygenase OS=Bordetella bronchiseptica GN=hmgA PE=3 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 6.993e-55 Identity = 103/195 (52.82%), Postives = 139/195 (71.28%), Query Frame = 1 Query: 100 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 L Y++GFGN+ ++EA+ GALP G+NSP +CP+GLYAEQ+SGT+FT+PR N+RSWLYRI+P H PF P A + +S+F + TP QLRW P+ +PD+PTDFIDG++T G G + G IH+Y AN+SM F NADG+ L+VPQ+GRL +ATE G +++ P EIAV+P+G R V L D +RG Sbjct: 3 LQYQTGFGNACATEALPGALPAGRNSPQICPYGLYAEQLSGTAFTAPRAENRRSWLYRIRPGVQHLPFAPFAGAQ-RWLSDFGRQP--VTPNQLRWSPLPMPDAPTDFIDGMHTWGGNGGPEEQSGVGIHLYAANRSMQGRFFYNADGEMLIVPQQGRLRLATELGLIDIEPYEIAVVPRGVRLRVELLDDVARG 194
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_BORA1 (Homogentisate 1,2-dioxygenase OS=Bordetella avium (strain 197N) GN=hmgA PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 9.133e-55 Identity = 106/195 (54.36%), Postives = 135/195 (69.23%), Query Frame = 1 Query: 100 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 LNY+SGFGN+ ++EA+ GALP+G+NSP CP+GLYAEQ+SGT+FT+PR N+RSWLYRI+P H PF+P A L D TP QLRW P+ +P +PTDFIDG++T G G + G IH+Y AN+SM F NAD + L+VPQ GRL +ATE G L++ P EIAVLP+G RF V L D +RG Sbjct: 3 LNYQSGFGNACATEALPGALPQGRNSPQQCPYGLYAEQLSGTAFTAPRSENRRSWLYRIRPGVVHRPFEPYAGAPHWLA---DFGTGPVTPNQLRWSPLPLPATPTDFIDGVHTWGGNGGPDEQSGVGIHLYAANQSMKGRFFYNADAEMLLVPQLGRLRLATEMGLLDLEPLEIAVLPRGVRFRVELLDAEARG 194
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_RALPJ (Homogentisate 1,2-dioxygenase OS=Ralstonia pickettii (strain 12J) GN=hmgA PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 2.657e-54 Identity = 106/193 (54.92%), Postives = 134/193 (69.43%), Query Frame = 1 Query: 106 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 Y+SGFGN FS+EA+ GALP GQNSP P+GLYAEQISGT+FT+PR N+RSWLYRI+P A H PF+ A G+ S F++ +P QLRW P+ P + TDFIDG+ T G G + G IH+Y AN M + F NADG+ L+VPQ+GRL + TE G ++V P EIAV+P+G RF V LPDG +RG Sbjct: 22 YQSGFGNEFSTEALPGALPHGQNSPQKAPYGLYAEQISGTAFTAPRAHNRRSWLYRIRPGAVHLPFEAM--AQGRFHSHFNEVPP--SPNQLRWDPLPAPAAGTDFIDGIVTFAGNGGPDAQTGCGIHLYAANADMTDRFFYNADGELLIVPQQGRLRLLTEMGVVDVEPLEIAVIPRGVRFRVELPDGDARG 210
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_RALSO (Homogentisate 1,2-dioxygenase OS=Ralstonia solanacearum GN=hmgA PE=3 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 4.533e-54 Identity = 105/193 (54.40%), Postives = 135/193 (69.95%), Query Frame = 1 Query: 106 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 Y+SGFGN F++EA+ GALP GQNSP P+GLYAEQ+SGT+FT+PR N+R+WLYRI+P+A H PF+P A + S+F + +P QLRW P+ P + TDFIDG+ T G G + G IH+Y AN SM F NADG+ L+VPQ+GRL + TE G L+V P EIAV+P+G RF V LPDG +RG Sbjct: 22 YQSGFGNEFATEALPGALPHGQNSPQQAPYGLYAEQLSGTAFTAPRAHNRRAWLYRIRPAAVHLPFEPI--AQDRFHSDFHAVPA--SPNQLRWDPLPAPAAGTDFIDGIVTFAGNGGPDAQTGCGIHLYAANASMTGRFFYNADGELLIVPQQGRLRLLTELGVLDVEPLEIAVIPRGVRFRVELPDGEARG 210
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_RALEJ (Homogentisate 1,2-dioxygenase OS=Ralstonia eutropha (strain JMP134) GN=hmgA PE=3 SV=2) HSP 1 Score: 209.92 bits (533), Expect = 1.010e-53 Identity = 102/193 (52.85%), Postives = 134/193 (69.43%), Query Frame = 1 Query: 106 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 Y SGF N F++EA+ GALP GQNSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P A H+PF + + +S FD+ +P Q+RW P +P +PTDFIDG+ T+ G G G IH+Y AN+SM + F NADG+ L+VPQ+GR+ TE G+L+V P EI V+P+G RF V LPDG +RG Sbjct: 13 YMSGFANEFATEALPGALPVGQNSPQRAPYGLYAEQLSGTAFTAPRAHNRRSWLYRIRPGAVHKPFT--LVEQSRFLSRFDEVPP--SPNQMRWSPPAMPTTPTDFIDGIVTMAGNGGPDAMTGCGIHLYLANQSMQDRFFYNADGEMLIVPQQGRVRFVTEMGRLDVEPQEIVVIPRGVRFRVELPDGEARG 201
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_RALEH (Homogentisate 1,2-dioxygenase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=hmgA PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.722e-53 Identity = 102/193 (52.85%), Postives = 133/193 (68.91%), Query Frame = 1 Query: 106 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 Y SGF N F++EA+ GALP G+NSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P+A H PF + +S FD+ +P Q+RW P +P PTDF+DG+ T+ G G G IH+Y AN+SM + F NADG+ L+VPQ+GRL + TE G+LEV P EI V+P+G RF V LPDG +RG Sbjct: 13 YMSGFANEFATEALPGALPVGRNSPQCAPYGLYAEQLSGTAFTAPRAHNRRSWLYRIRPAAMHTPFTQI--EQSRFLSRFDQVPP--SPNQMRWSPPAMPSVPTDFVDGIVTMAGNGGPEAMTGCGIHLYLANQSMQDRFFYNADGEMLIVPQQGRLLMVTELGRLEVEPQEIVVIPRGVRFRVELPDGEARG 201
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_MYXXD (Homogentisate 1,2-dioxygenase OS=Myxococcus xanthus (strain DK 1622) GN=hmgA PE=3 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 3.837e-53 Identity = 105/194 (54.12%), Postives = 137/194 (70.62%), Query Frame = 1 Query: 106 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVS-EFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 Y SGFGN F++EA+ GALP GQNSP PFGLYAEQ+SG++FT+PR+ N+RSWLYR++PSA H F+P A G L S FD+ + +P +LRW P P PTDF+DGL T G G + G +IH+Y AN+SM + F +ADG+ L+VPQ GRL + TE G L+V+PGEIAV+P+G RF LP+G + G Sbjct: 14 YLSGFGNEFATEAVPGALPEGQNSPQRAPFGLYAEQLSGSAFTAPRRENRRSWLYRLRPSANHPAFQPL--AQGLLRSGPFDEVPA--SPNRLRWSPQPPPAQPTDFVDGLVTYAGNGDAASGAGISIHLYAANRSMVDRVFFDADGELLIVPQAGRLRLVTELGVLDVAPGEIAVVPRGVRFRAELPEGQAAG 203 The following BLAST results are available for this feature:
BLAST of CN185674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185674 ID=CN185674; Name=CN185674; organism=Citrus sinensis; type=EST; length=685bpback to top |