CN185674
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_PSEE4 (Homogentisate 1,2-dioxygenase OS=Pseudomonas entomophila (strain L48) GN=hmgA PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.255e-45 Identity = 100/197 (50.76%), Postives = 127/197 (64.47%), Query Frame = 1 Query: 100 LNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFK--PRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 L Y SGFGN F+SEA+ GALP GQNSP P+GLYAE +SGT+FT R +R+WLYRI+PSA H F+ R P G L TP +LRW P +P PTDFI+G + +S G +I++Y AN+SM+ F NADG+ L+VP++GRL IATE G LEV P EIAV+P+G +F V L D +RG Sbjct: 9 LQYLSGFGNEFASEALPGALPVGQNSPQKAPYGLYAELLSGTAFTMTRSELRRTWLYRIRPSALHPRFERLERQPLTGAL--------GAITPNRLRWSPQPMPAEPTDFIEGWLPMVANSASEKPAGVSIYIYRANRSMER-VFFNADGELLLVPEQGRLRIATELGVLEVEPLEIAVIPRGMKFRVELLDDQARG 196
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_EMENI (Homogentisate 1,2-dioxygenase OS=Emericella nidulans GN=hmgA PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 8.568e-45 Identity = 92/193 (47.67%), Postives = 125/193 (64.77%), Query Frame = 1 Query: 106 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 Y++GF + SEAI+GALP G NSP P+GLYAE++SGT+FT+PR N+++W+YRI P+A HE F + +S+ K P QLRW P D+ D D++ GL+ + G+G ++ G I +Y A K M AF +ADGDFL+V Q G L I TE G+L V P EI V+P+G R+ V+LPDGP RG Sbjct: 14 YQNGFDSYHESEAIEGALPVGHNSPQKAPYGLYAEKLSGTAFTAPRHENKQTWVYRILPAAAHENFVEEDASSYHTLSDAKKLQHI--PNQLRWDPFDL-DETVDWVHGLHLVAGSGDPTVKQGLGILLYAAGKDMGKEAFYSADGDFLIVAQHGVLDIQTELGRLLVRPNEICVIPRGVRYRVTLPDGPVRG 203
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_NITHX (Homogentisate 1,2-dioxygenase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=hmgA PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.252e-44 Identity = 91/193 (47.15%), Postives = 119/193 (61.66%), Query Frame = 1 Query: 106 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 Y SGFGNSF +EA+ GALP G+NSP C +GLYAEQ+SG+ FT+PR N+RSWLYRI+PS H ++ A KL QLRW P IP+ F+ + T+ AG + + G A H+Y +SM + F NADG+ L VPQ G L TE G ++ PGEIAV+P+G +F V +P GP+RG Sbjct: 21 YMSGFGNSFETEALPGALPIGRNSPQRCAYGLYAEQLSGSPFTAPRGANERSWLYRIRPSVRHSGHFVKIDA--KLWRTAPCLEHDMPLAQLRWDPTPIPEDELTFVQSVRTMTTAGDAHTQTGMAAHIYLITRSMVDQHFYNADGEMLFVPQGGSLRFVTEFGVIDTEPGEIAVIPRGVKFRVEIPSGPARG 211
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_BRAJA (Homogentisate 1,2-dioxygenase OS=Bradyrhizobium japonicum GN=hmgA PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.110e-43 Identity = 88/194 (45.36%), Postives = 121/194 (62.37%), Query Frame = 1 Query: 106 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTP-TQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 Y SGFGNSF +EA+ GALP G+NSP C +GLYAEQ+SG+ FT+PR N+RSWLYRI+PS H + A + + Y P Q+RW P +P F+ G+ T+ AG + G A H+Y KSM + F NADG+ + V Q+G L + TE G+++ PGEI V+P+G +F V +P+GP+RG Sbjct: 21 YMSGFGNSFETEALPGALPIGRNSPQRCAYGLYAEQLSGSPFTAPRGTNERSWLYRIRPSVKHSGRFEKADAG---LWRSAPCHEYDLPIAQMRWDPTPVPKEEVTFVQGVQTMTTAGDVNTQAGMAAHVYLITKSMVDQHFYNADGELMFVLQQGNLRLVTEFGRIDAEPGEIVVIPRGVKFRVEIPNGPARG 211
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_RHOPB (Homogentisate 1,2-dioxygenase OS=Rhodopseudomonas palustris (strain BisB18) GN=hmgA PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.756e-43 Identity = 93/194 (47.94%), Postives = 122/194 (62.89%), Query Frame = 1 Query: 106 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTP-TQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 Y SGFGNSF +EA+ GALP G+NSP P+GLYAEQ+SG+ FT+PR N+RSWLYRI+PS H + A + + + P QLRW P +P F+ G+ T+ AG + G A HMY + SM N F NADG+ + VPQ+G L + TE G + V+PGEIAV+P+G +F V L DGP+RG Sbjct: 21 YMSGFGNSFETEALPGALPIGRNSPQRAPYGLYAEQLSGSPFTAPRGSNERSWLYRIRPSVQHSGRFEKAEAG---LWRSAPCHEHDMPIAQLRWDPPPLPQRAQTFLQGVETMTTAGDVNTQAGMAAHMYLISASMVNQHFYNADGELMFVPQQGGLRLVTEFGVIGVAPGEIAVIPRGVKFRVELIDGPARG 211
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_RHILO (Homogentisate 1,2-dioxygenase OS=Rhizobium loti GN=hmgA PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.787e-42 Identity = 92/200 (46.00%), Postives = 122/200 (61.00%), Query Frame = 1 Query: 85 EDFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 ED +Y GFGN F +E + G+LP+G+NSP +GLYAEQ+SG+ FT+PR N+RSWLYRI+PS H + + ++ + + + Q RW PV +P PTDFI G+ +I AG + G A H+Y AN+SM + F NADG+ LVVPQ G L TE G +E+ PGEIAVLP+G F L D RG Sbjct: 18 EDRMAFSYMPGFGNDFETETLPGSLPQGRNSPQRPAYGLYAEQLSGSPFTAPRGTNERSWLYRIRPSVKHTG-RFKAASYPLWKTAPNVGDHELALGQYRWNPVPMPKEPTDFIQGMRSITTAGDVLGQTGMAAHVYVANRSMVDDHFFNADGELLVVPQVGALRFVTEMGVIELRPGEIAVLPRGLVFKAELVDKDVRG 216
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_RHOPT (Homogentisate 1,2-dioxygenase OS=Rhodopseudomonas palustris (strain TIE-1) GN=hmgA PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.975e-41 Identity = 89/194 (45.88%), Postives = 118/194 (60.82%), Query Frame = 1 Query: 106 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHE-PFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 Y SGFGNSF +EA+ GALP G+NSP C +GLYAEQ+SG+ FT+PR N+RSWLYRI+PS H F + F+ QLRW P +P F+ G+ T+ AG + G A H+Y +SM + F NADG+ + VPQ+G L + TE G + + P EIAV+P+G +F V L DGP+RG Sbjct: 21 YMSGFGNSFETEALPGALPVGRNSPQRCAYGLYAEQLSGSPFTAPRGANERSWLYRIRPSVKHSGRFAKTDMGLWRSAPCFEHD---LPIAQLRWDPPPMPQEKLTFLQGVRTMTTAGDVNTQAGMATHLYLITQSMVDQHFYNADGEMMFVPQQGSLRLVTEFGIITIEPAEIAVIPRGIKFRVELVDGPARG 211
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_RHOPA (Homogentisate 1,2-dioxygenase OS=Rhodopseudomonas palustris GN=hmgA PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.580e-41 Identity = 89/194 (45.88%), Postives = 118/194 (60.82%), Query Frame = 1 Query: 106 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHE-PFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 Y SGFGNSF +EA+ GALP G+NSP C +GLYAEQ+SG+ FT+PR N+RSWLYRI+PS H F + F+ QLRW P +P F+ G+ T+ AG + G A H+Y +SM + F NADG+ + VPQ+G L + TE G + + P EIAV+P+G +F V L DGP+RG Sbjct: 21 YMSGFGNSFETEALPGALPVGRNSPQRCAYGLYAEQLSGSPFTAPRGANERSWLYRIRPSVKHSGRFAKTDMGLWRSAPCFEHD---LPIAQLRWDPPPMPQEALTFLQGVRTMTTAGDVNTQAGMATHLYLITQSMVDQHFYNADGEMMFVPQQGSLRLVTEFGIITIEPAEIAVIPRGVKFRVELVDGPARG 211
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_RHOP5 (Homogentisate 1,2-dioxygenase OS=Rhodopseudomonas palustris (strain BisA53) GN=hmgA PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.580e-41 Identity = 88/194 (45.36%), Postives = 118/194 (60.82%), Query Frame = 1 Query: 106 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTP-TQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 Y SGF NSF +EA+ GALP G+NSP C +GLYAEQ+SG+ FT+PR N+RSWLYRI+PS H R + + + P QLRW P +P F+ G+ T+ AG + + G A H+Y SM + AF NADG+ + VPQ+G L TE G+++ PGEI V+P+G +F V L GP+RG Sbjct: 21 YMSGFKNSFETEALPGALPIGRNSPQRCAYGLYAEQLSGSPFTAPRGSNERSWLYRIRPSVKHSG---RFAKADVGLWRTAPCHEHEMPIAQLRWDPPPLPQHEQTFLQGVVTMTTAGDANTQAGMAAHIYLITASMVDQAFYNADGELMFVPQQGSLRFVTEFGRIDAGPGEIVVIPRGVKFRVELTGGPARG 211
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_RHOPS (Homogentisate 1,2-dioxygenase OS=Rhodopseudomonas palustris (strain BisB5) GN=hmgA PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 7.506e-41 Identity = 89/194 (45.88%), Postives = 118/194 (60.82%), Query Frame = 1 Query: 106 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTP-TQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 Y SGFGNSF +EA+ GALP G+NSP +GLYAEQ+SG+ FT+PR N+RSWLYRI+PS H R + + P QLRW +P F+ G+ T+ AG + G A HMY ++SM + F NADG+ + VPQ+GRL + TE G + + P EIAV+P+G +F V L DGP+RG Sbjct: 21 YMSGFGNSFETEALPGALPVGRNSPQRAAYGLYAEQLSGSPFTAPRGANERSWLYRIRPSVKHSG---RFAKADMGLWRSAPCLEHDMPIAQLRWDAPPMPTEEVTFVQGVRTMTTAGDVNTQAGMAAHMYLISRSMVDQHFYNADGELMFVPQQGRLRLVTEFGVIAIEPAEIAVIPRGVKFRVELVDGPARG 211 The following BLAST results are available for this feature:
BLAST of CN185674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185674 ID=CN185674; Name=CN185674; organism=Citrus sinensis; type=EST; length=685bpback to top |