CN185673
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_ARATH (Homogentisate 1,2-dioxygenase OS=Arabidopsis thaliana GN=HGO PE=2 SV=2) HSP 1 Score: 318.546 bits (815), Expect = 2.694e-86 Identity = 144/163 (88.34%), Postives = 151/163 (92.64%), Query Frame = -3 Query: 321 VPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHFS 809 VPYKYDL KFCP+NTVL+DHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLI G YEAKADGFLPGGASLHSCMTPHGPDT TYEATIAR + P K+T TMAFMFES LIPR+C WALESPF+DHDYYQCWIGL+SHFS Sbjct: 279 VPYKYDLKKFCPYNTVLLDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIYGAYEAKADGFLPGGASLHSCMTPHGPDTTTYEATIARVNAMAPSKLTGTMAFMFESALIPRVCHWALESPFLDHDYYQCWIGLKSHFS 441
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_ORYSJ (Homogentisate 1,2-dioxygenase OS=Oryza sativa subsp. japonica GN=HGO PE=2 SV=1) HSP 1 Score: 302.753 bits (774), Expect = 1.530e-81 Identity = 138/172 (80.23%), Postives = 151/172 (87.79%), Query Frame = -3 Query: 294 VPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHFSYEEADNESD 809 VPYKYDLSKFCPFNTVL DH DPS+NTVLTAPTDKPGVALLDFVIFPPRWLVAE+TFRPPYYHRNCMSEFMGLI G YEAKADGFLPGGASLHSCMTPHGPDTKTYEATI+R P +++ T+AFMFES LIPR+C WAL+SP D DYYQCWIGL+SHFS++ S+ Sbjct: 294 VPYKYDLSKFCPFNTVLFDHADPSVNTVLTAPTDKPGVALLDFVIFPPRWLVAENTFRPPYYHRNCMSEFMGLIYGIYEAKADGFLPGGASLHSCMTPHGPDTKTYEATISRPDANEPSRLSGTLAFMFESALIPRVCQWALDSPSRDLDYYQCWIGLKSHFSHDNGGATSE 465
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_DICDI (Homogentisate 1,2-dioxygenase OS=Dictyostelium discoideum GN=hgd PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.594e-54 Identity = 107/161 (66.46%), Postives = 124/161 (77.02%), Query Frame = -3 Query: 327 PYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITD-TMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSH 806 PYKYDLS FC N+V DH DPSI TVLTAPT++ GVA DFVIFPPRWLV E+TFRPPY+HRNCMSEFMGLIRG YEAK +GFLPGG SLHSCMTPHGPD+ T+ A I K P KI D +AFMFES LI I +A ++ F+D DY++CW GL+ + Sbjct: 272 PYKYDLSLFCVVNSVSFDHLDPSIFTVLTAPTNEVGVAAADFVIFPPRWLVQENTFRPPYFHRNCMSEFMGLIRGVYEAKKEGFLPGGGSLHSCMTPHGPDSDTFYAAIKAELK--PTKIPDVALAFMFESSLILGISDYAKKN-FIDDDYWKCWQGLKDN 429
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_PONAB (Homogentisate 1,2-dioxygenase OS=Pongo abelii GN=HGD PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 4.342e-52 Identity = 102/164 (62.20%), Postives = 119/164 (72.56%), Query Frame = -3 Query: 321 PYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITD-TMAFMFESCLIPRICPWALE-SPFMDHDYYQCWIGLRSHFS 806 PYKY+L F N+V DH DPSI TVLTA + +PGVA+ DFVIFPPRW VA+ TFRPPYYHRNCMSEFMGLIRG YEAK GFLPGG SLHS MTPHGPD +E A +K P +I D TMAFMFES L + W L+ S +D +Y++CW L+SHF+ Sbjct: 274 PYKYNLKNFMVINSVAFDHADPSIFTVLTAKSVRPGVAIADFVIFPPRWGVADKTFRPPYYHRNCMSEFMGLIRGHYEAKQGGFLPGGGSLHSTMTPHGPDADCFEK--ASKAKLAPERIADGTMAFMFESSLSLAVTKWGLKASRCLDENYHKCWEPLKSHFT 435
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_MYXXD (Homogentisate 1,2-dioxygenase OS=Myxococcus xanthus (strain DK 1622) GN=hmgA PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 4.342e-52 Identity = 96/160 (60.00%), Postives = 118/160 (73.75%), Query Frame = -3 Query: 333 MVPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLR 812 +VPYKYDL++F NTV DH DPSI TVLT+P++ PG A DFVIFPPRW+VAEHTFRPP++HRN MSEFMGL+ G Y+AKA GF PGG SLH+CM+ HGPD +YE I K P+KI DT+AFMFES + R +A+E+P + DY CW G + Sbjct: 275 LVPYKYDLARFNTINTVSFDHPDPSIFTVLTSPSEVPGTANCDFVIFPPRWMVAEHTFRPPWFHRNVMSEFMGLVHGVYDAKAGGFAPGGGSLHNCMSGHGPDRTSYEQAIQADLK--PHKIKDTLAFMFESRWVIRPTRFAMETPALQQDYDACWAGFQ 432
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_MOUSE (Homogentisate 1,2-dioxygenase OS=Mus musculus GN=Hgd PE=1 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 4.342e-52 Identity = 102/164 (62.20%), Postives = 118/164 (71.95%), Query Frame = -3 Query: 321 PYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITD-TMAFMFESCLIPRICPWALES-PFMDHDYYQCWIGLRSHFS 806 PYKY+L F N V DH DPSI TVLTA + +PGVA+ DFVIFPPRW VA+ TFRPPYYHRNCMSEFMGLI+G YEAK GFLPGG SLHS MTPHGPD +E A +K P +I D TMAFMFES L + W L++ +D +YY+CW LRSHF+ Sbjct: 274 PYKYNLENFMVINAVAFDHADPSIFTVLTAKSLRPGVAIADFVIFPPRWGVADKTFRPPYYHRNCMSEFMGLIKGHYEAKQGGFLPGGGSLHSAMTPHGPDADCFEK--ASKAKLEPERIADGTMAFMFESSLSLAVTKWGLKTCSCLDENYYKCWEPLRSHFT 435
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_HUMAN (Homogentisate 1,2-dioxygenase OS=Homo sapiens GN=HGD PE=1 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 9.672e-52 Identity = 102/164 (62.20%), Postives = 118/164 (71.95%), Query Frame = -3 Query: 321 PYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITD-TMAFMFESCLIPRICPWALE-SPFMDHDYYQCWIGLRSHFS 806 PYKY+L F N+V DH DPSI TVLTA + +PGVA+ DFVIFPPRW VA+ TFRPPYYHRNCMSEFMGLIRG YEAK GFLPGG SLHS MTPHGPD +E A K P +I D TMAFMFES L + W L+ S +D +Y++CW L+SHF+ Sbjct: 274 PYKYNLKNFMVINSVAFDHADPSIFTVLTAKSVRPGVAIADFVIFPPRWGVADKTFRPPYYHRNCMSEFMGLIRGHYEAKQGGFLPGGGSLHSTMTPHGPDADCFEK--ASKVKLAPERIADGTMAFMFESSLSLAVTKWGLKASRCLDENYHKCWEPLKSHFT 435
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_PSEF5 (Homogentisate 1,2-dioxygenase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=hmgA PE=3 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.814e-51 Identity = 99/163 (60.74%), Postives = 121/163 (74.23%), Query Frame = -3 Query: 321 VPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHFS 809 VPYKYDL +F TV DH DPSI TVLT+PT PG+A LDFVIFPPRW+VAE+TFRPP++HRN M+EFMGLI+G Y+AKA+GFLPGGASLHSCM+ HGPD +T T A ++ P KI +TMAFMFE+ + R +ALE P + +DY CW L F+ Sbjct: 270 VPYKYDLRRFNTIGTVSFDHPDPSIFTVLTSPTSVPGLANLDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLIQGAYDAKAEGFLPGGASLHSCMSAHGPDGET--CTKAINAQLQPAKIDNTMAFMFETSQVLRPSQFALECPELQNDYDACWASLPVTFN 430
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_PSEAE (Homogentisate 1,2-dioxygenase OS=Pseudomonas aeruginosa GN=hmgA PE=3 SV=2) HSP 1 Score: 201.83 bits (512), Expect = 3.675e-51 Identity = 97/163 (59.51%), Postives = 121/163 (74.23%), Query Frame = -3 Query: 321 VPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHFS 809 VPYKYDL +F TV DH DPSI TVLT+PT PG+A +DFVIFPPRW+VAE+TFRPP++HRN M+EFMGLI+G Y+AKA GF+PGGASLHSCM+ HGPD ++ + IA K P++I TMAFMFE+ + R ALE+P + +DY CW L S F+ Sbjct: 268 VPYKYDLRRFNTIGTVSFDHPDPSIFTVLTSPTSVPGLANIDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLIQGAYDAKAGGFVPGGASLHSCMSAHGPDAESCDKAIAADLK--PHRIDQTMAFMFETSQVLRPSRAALETPALQNDYDACWASLVSTFN 428
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_PSEA8 (Homogentisate 1,2-dioxygenase OS=Pseudomonas aeruginosa (strain LESB58) GN=hmgA PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 3.675e-51 Identity = 97/163 (59.51%), Postives = 121/163 (74.23%), Query Frame = -3 Query: 321 VPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHFS 809 VPYKYDL +F TV DH DPSI TVLT+PT PG+A +DFVIFPPRW+VAE+TFRPP++HRN M+EFMGLI+G Y+AKA GF+PGGASLHSCM+ HGPD ++ + IA K P++I TMAFMFE+ + R ALE+P + +DY CW L S F+ Sbjct: 268 VPYKYDLRRFNTIGTVSFDHPDPSIFTVLTSPTSVPGLANIDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLIQGAYDAKAGGFVPGGASLHSCMSAHGPDAESCDKAIAADLK--PHRIDQTMAFMFETSQVLRPSRAALETPALQNDYDACWASLVSTFN 428 The following BLAST results are available for this feature:
BLAST of CN185673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185673 ID=CN185673; Name=CN185673; organism=Citrus sinensis; type=EST; length=814bpback to top |