CN185673
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_PSEAB (Homogentisate 1,2-dioxygenase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=hmgA PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 4.064e-50 Identity = 96/163 (58.90%), Postives = 120/163 (73.62%), Query Frame = -3 Query: 321 VPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHFS 809 VPYKYDL +F TV DH DPSI TVLT+PT G+A +DFVIFPPRW+VAE+TFRPP++HRN M+EFMGLI+G Y+AKA GF+PGGASLHSCM+ HGPD ++ + IA K P++I TMAFMFE+ + R ALE+P + +DY CW L S F+ Sbjct: 268 VPYKYDLRRFNTIGTVSFDHPDPSIFTVLTSPTSVHGLANIDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLIQGAYDAKAGGFVPGGASLHSCMSAHGPDAESCDKAIAADLK--PHRIDQTMAFMFETSQVLRPSRAALETPALQNDYDACWASLVSTFN 428
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_PSEA7 (Homogentisate 1,2-dioxygenase OS=Pseudomonas aeruginosa (strain PA7) GN=hmgA PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 9.053e-50 Identity = 95/163 (58.28%), Postives = 120/163 (73.62%), Query Frame = -3 Query: 321 VPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHFS 809 VPYKYDL +F TV DH DPSI TVLT+PT G+A +DFVIFPPRW+VAE+TFRPP++HRN M+EFMGLI+G Y+AKA GF+PGGASLHSCM+ HGPD ++ + IA + P++I TMAFMFE+ + R ALE+P + +DY CW L S F+ Sbjct: 268 VPYKYDLRRFNTIGTVSFDHPDPSIFTVLTSPTSVHGLANIDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLIQGAYDAKAGGFVPGGASLHSCMSAHGPDAESCDKAIAADLR--PHRIDQTMAFMFETSQVLRPSRAALETPALQNDYDACWASLVSTFN 428
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_DROME (Homogentisate 1,2-dioxygenase OS=Drosophila melanogaster GN=hgo PE=1 SV=3) HSP 1 Score: 197.208 bits (500), Expect = 9.053e-50 Identity = 98/164 (59.76%), Postives = 116/164 (70.73%), Query Frame = -3 Query: 324 VPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITD-TMAFMFESCLIPRICPWALES-PFMDHDYYQCWIGLRSHF 809 VP+KYDLSKF N+V DH DPSI TVLT P+ + G A+ DFVIFPPRW V EHTFRPPYYHRNCMSEFMGLI G YEAK DGF GGA+LHS MTPHGPD K +E A +K P ++ + T AFMFES L + W E+ +D YY+CW L+++F Sbjct: 273 VPFKYDLSKFMVINSVSFDHCDPSIFTVLTCPSLRAGTAIADFVIFPPRWSVQEHTFRPPYYHRNCMSEFMGLILGKYEAKEDGFAAGGATLHSMMTPHGPDVKCFEG--ASNAKLVPERVAEGTQAFMFESSLSLAVTKWGEETCQKLDAAYYECWQALKNNF 434
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_PSEPK (Homogentisate 1,2-dioxygenase OS=Pseudomonas putida (strain KT2440) GN=hmgA PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.017e-49 Identity = 97/163 (59.51%), Postives = 117/163 (71.78%), Query Frame = -3 Query: 321 VPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHFS 809 VPYKYDL +F TV DH DPSI TVLT+PT G+A +DFVIFPPRW+VAE+TFRPP++HRN M+EFMGLI G Y+AKA+GFLPGGASLH M+ HGPD +T E IA + P+KI +TMAFMFE+ + R ALE P + DY CW L S F+ Sbjct: 269 VPYKYDLRRFNTIGTVSFDHPDPSIFTVLTSPTSVHGMANMDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLINGAYDAKAEGFLPGGASLHGVMSAHGPDAETCEKAIA--ADLAPHKIDNTMAFMFETSQVLRPSLQALECPQLQADYDSCWATLPSTFN 429
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_PSEPG (Homogentisate 1,2-dioxygenase OS=Pseudomonas putida (strain GB-1) GN=hmgA PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.017e-49 Identity = 97/163 (59.51%), Postives = 117/163 (71.78%), Query Frame = -3 Query: 321 VPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHFS 809 VPYKYDL +F TV DH DPSI TVLT+PT G+A +DFVIFPPRW+VAE+TFRPP++HRN M+EFMGLI G Y+AKA+GFLPGGASLH M+ HGPD +T E IA + P+KI +TMAFMFE+ + R ALE P + DY CW L S F+ Sbjct: 269 VPYKYDLRRFNTIGTVSFDHPDPSIFTVLTSPTSVHGLANMDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLINGAYDAKAEGFLPGGASLHGVMSAHGPDAETCEKAIA--ADLAPHKIDNTMAFMFETSQVLRPSLQALECPQLQADYDSCWATLPSTFN 429
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_PSEP1 (Homogentisate 1,2-dioxygenase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=hmgA PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.017e-49 Identity = 97/163 (59.51%), Postives = 117/163 (71.78%), Query Frame = -3 Query: 321 VPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHFS 809 VPYKYDL +F TV DH DPSI TVLT+PT G+A +DFVIFPPRW+VAE+TFRPP++HRN M+EFMGLI G Y+AKA+GFLPGGASLH M+ HGPD +T E IA + P+KI +TMAFMFE+ + R ALE P + DY CW L S F+ Sbjct: 269 VPYKYDLRRFNTIGTVSFDHPDPSIFTVLTSPTSVHGMANMDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLINGAYDAKAEGFLPGGASLHGVMSAHGPDAETCEKAIA--ADLAPHKIDNTMAFMFETSQVLRPSLQALECPQLQADYDSCWATLPSTFN 429
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_PSEPW (Homogentisate 1,2-dioxygenase OS=Pseudomonas putida (strain W619) GN=hmgA PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.634e-49 Identity = 97/163 (59.51%), Postives = 117/163 (71.78%), Query Frame = -3 Query: 321 VPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHFS 809 VPYKYDL +F TV DH DPSI TVLT+PT G+A +DFVIFPPRW+VAE+TFRPP++HRN M+EFMGLI G Y+AKA+GFLPGGASLH M+ HGPD +T E IA + P+KI +TMAFMFE+ + R ALE P + DY CW L S F+ Sbjct: 269 VPYKYDLRRFNTLGTVSFDHPDPSIFTVLTSPTSVHGLANMDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLISGAYDAKAEGFLPGGASLHGVMSAHGPDAETCEKAIA--ADLAPHKIDNTMAFMFETSQVLRPSLQALECPQLQADYDSCWATLPSTFN 429
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_PSEE4 (Homogentisate 1,2-dioxygenase OS=Pseudomonas entomophila (strain L48) GN=hmgA PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.440e-49 Identity = 96/163 (58.90%), Postives = 118/163 (72.39%), Query Frame = -3 Query: 321 VPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHFS 809 VPYKYDL +F TV DH DPSI TVLT+PT G+A +DFVIFPPRW+VAE+TFRPP++HRN M+EFMGLI+G Y+AKA+GFLPGGASLH M+ HGPD +T + I+ P+KI +TMAFMFE+ + R ALESP + DY CW L S F+ Sbjct: 269 VPYKYDLRRFNTIGTVSFDHPDPSIFTVLTSPTSVHGMANMDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLIQGAYDAKAEGFLPGGASLHGVMSAHGPDAETCDKAIS--VDLAPHKIDNTMAFMFETSQVLRPSRQALESPQLQADYDSCWATLPSTFN 429
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_CAUCR (Homogentisate 1,2-dioxygenase OS=Caulobacter crescentus GN=hmgA PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.493e-49 Identity = 95/158 (60.13%), Postives = 113/158 (71.52%), Query Frame = -3 Query: 339 MVPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIG 812 + PY+YDLS+F NTV DH DPSI TVLT+P+D PG A DFVIFPPRW+VAE TFRPP++HRN MSEFMGLI G Y+AKA GF+PGGASLH+CM+ HGPD +++ A P+KI TMAFMFES + R ALES + DY CW G Sbjct: 263 LTPYRYDLSRFNTINTVSYDHPDPSIFTVLTSPSDTPGTANCDFVIFPPRWMVAEDTFRPPWFHRNVMSEFMGLIHGAYDAKAGGFVPGGASLHNCMSDHGPDVASHKK--ATEVVLAPHKIDGTMAFMFESRWVFRPTHLALESAALQSDYDACWTG 418
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_CAUCN (Homogentisate 1,2-dioxygenase OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=hmgA PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.493e-49 Identity = 95/158 (60.13%), Postives = 113/158 (71.52%), Query Frame = -3 Query: 339 MVPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIG 812 + PY+YDLS+F NTV DH DPSI TVLT+P+D PG A DFVIFPPRW+VAE TFRPP++HRN MSEFMGLI G Y+AKA GF+PGGASLH+CM+ HGPD +++ A P+KI TMAFMFES + R ALES + DY CW G Sbjct: 263 LTPYRYDLSRFNTINTVSYDHPDPSIFTVLTSPSDTPGTANCDFVIFPPRWMVAEDTFRPPWFHRNVMSEFMGLIHGAYDAKAGGFVPGGASLHNCMSDHGPDVASHKK--ATEVVLAPHKIDGTMAFMFESRWVFRPTHLALESAALQSDYDACWTG 418 The following BLAST results are available for this feature:
BLAST of CN185673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185673 ID=CN185673; Name=CN185673; organism=Citrus sinensis; type=EST; length=814bpback to top |