CN185673
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_XANCP (Homogentisate 1,2-dioxygenase OS=Xanthomonas campestris pv. campestris GN=hmgA PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 5.868e-49 Identity = 91/161 (56.52%), Postives = 114/161 (70.81%), Query Frame = -3 Query: 324 PYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHF 806 PY+YDL +F ++ DH DPSI TVLT+P+D G A +DF IFPPRWLVA+HTFRPP++HRN SEFMGL+ G Y+AKADGF PGGASLH+CM+ HGPD T++ ++ + P IT+TMAFMFE+ + R AL +P DY QCW GLR F Sbjct: 290 PYRYDLRRFNTIGSISFDHPDPSIFTVLTSPSDTHGTANMDFAIFPPRWLVAQHTFRPPWFHRNVASEFMGLVHGVYDAKADGFAPGGASLHNCMSGHGPDAATFDKA-SQADLSRPDVITETMAFMFETRAVLRPTAQALHAPHRQGDYQQCWAGLRKAF 449
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_XANC8 (Homogentisate 1,2-dioxygenase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=hmgA PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 5.868e-49 Identity = 91/161 (56.52%), Postives = 114/161 (70.81%), Query Frame = -3 Query: 324 PYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHF 806 PY+YDL +F ++ DH DPSI TVLT+P+D G A +DF IFPPRWLVA+HTFRPP++HRN SEFMGL+ G Y+AKADGF PGGASLH+CM+ HGPD T++ ++ + P IT+TMAFMFE+ + R AL +P DY QCW GLR F Sbjct: 290 PYRYDLRRFNTIGSISFDHPDPSIFTVLTSPSDTHGTANMDFAIFPPRWLVAQHTFRPPWFHRNVASEFMGLVHGVYDAKADGFAPGGASLHNCMSGHGPDAATFDKA-SQADLSRPDVITETMAFMFETRAVLRPTAQALHAPHRQGDYQQCWAGLRKAF 449
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_RHISN (Homogentisate 1,2-dioxygenase OS=Rhizobium sp. (strain NGR234) GN=hmgA PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 5.868e-49 Identity = 92/162 (56.79%), Postives = 112/162 (69.14%), Query Frame = -3 Query: 321 PYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHFS 806 PYKYDL F P +L DH DPSI TVLTAP+ + G A +DFV+FPPRWLVAEHTFRPP+YHRN MSEFMGLI G Y+AK +GF+PGG SLH+ M HGPDT +E A + P K+ +TMAFMFE+ ++ +A E + DY CW GLR F+ Sbjct: 286 PYKYDLKTFSPVGAILFDHPDPSIFTVLTAPSGEEGTANVDFVLFPPRWLVAEHTFRPPWYHRNIMSEFMGLIHGRYDAKEEGFVPGGMSLHNMMLAHGPDTSGFEK--ATNGELKPVKLDNTMAFMFETRFPQQLTRFAAELETLQDDYIDCWAGLRKRFN 445
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_RALEJ (Homogentisate 1,2-dioxygenase OS=Ralstonia eutropha (strain JMP134) GN=hmgA PE=3 SV=2) HSP 1 Score: 193.741 bits (491), Expect = 1.001e-48 Identity = 91/162 (56.17%), Postives = 113/162 (69.75%), Query Frame = -3 Query: 321 PYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHFS 806 PYKYDL +F ++ DH DPSI VL +P+D PGV +DFVIF PRWL E++FRPP++HRN SEFMGLI G Y+AKADGF PGGASLH+CM+ HGPD T+ A + P+ ITDTMAFMFE+ + R P+A S + DYY CW GL+ HF+ Sbjct: 275 PYKYDLRRFNTIGSISFDHPDPSIFLVLQSPSDTPGVDTIDFVIFGPRWLAMENSFRPPWFHRNIASEFMGLITGVYDAKADGFAPGGASLHNCMSGHGPDADTF-AKATSADTSTPHHITDTMAFMFETPGVIRPTPYAARSASLQQDYYTCWQGLKKHFN 435
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_BORPE (Homogentisate 1,2-dioxygenase OS=Bordetella pertussis GN=hmgA PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.001e-48 Identity = 98/167 (58.68%), Postives = 118/167 (70.66%), Query Frame = -3 Query: 309 PYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYE-ATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHFSYEEA 806 PYKYDL F ++ DH DPSI TVLT+P+D PG A +DF IFPPR L E+TFRPP++HRN SEFMGLI G Y+AKA+GF PGGASLH+CM+ HGPD T+E A+ A S+A + I DTMAFMFE+ + R AL SP DYYQCW GL+ HF E+A Sbjct: 268 PYKYDLRNFNTVGSISYDHPDPSIFTVLTSPSDTPGTANMDFAIFPPRILAMENTFRPPWFHRNIASEFMGLIHGVYDAKAEGFAPGGASLHNCMSGHGPDADTFEKASHADTSQA--HYIRDTMAFMFETRRVIRPTAQALASPQRQDDYYQCWQGLQKHFDPEQA 432
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_BORPA (Homogentisate 1,2-dioxygenase OS=Bordetella parapertussis GN=hmgA PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.001e-48 Identity = 98/167 (58.68%), Postives = 118/167 (70.66%), Query Frame = -3 Query: 309 PYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYE-ATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHFSYEEA 806 PYKYDL F ++ DH DPSI TVLT+P+D PG A +DF IFPPR L E+TFRPP++HRN SEFMGLI G Y+AKA+GF PGGASLH+CM+ HGPD T+E A+ A S+A + I DTMAFMFE+ + R AL SP DYYQCW GL+ HF E+A Sbjct: 268 PYKYDLRNFNTVGSISYDHPDPSIFTVLTSPSDTPGTANMDFAIFPPRILAMENTFRPPWFHRNIASEFMGLIHGVYDAKAEGFAPGGASLHNCMSGHGPDADTFEKASHADTSQA--HYIRDTMAFMFETRRVIRPTAQALASPQRQDDYYQCWQGLQKHFDPEQA 432
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_BORBR (Homogentisate 1,2-dioxygenase OS=Bordetella bronchiseptica GN=hmgA PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.001e-48 Identity = 98/167 (58.68%), Postives = 118/167 (70.66%), Query Frame = -3 Query: 309 PYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYE-ATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHFSYEEA 806 PYKYDL F ++ DH DPSI TVLT+P+D PG A +DF IFPPR L E+TFRPP++HRN SEFMGLI G Y+AKA+GF PGGASLH+CM+ HGPD T+E A+ A S+A + I DTMAFMFE+ + R AL SP DYYQCW GL+ HF E+A Sbjct: 268 PYKYDLRNFNTVGSISYDHPDPSIFTVLTSPSDTPGTANMDFAIFPPRILAMENTFRPPWFHRNIASEFMGLIHGVYDAKAEGFAPGGASLHNCMSGHGPDADTFEKASHADTSQA--HYIRDTMAFMFETRRVIRPTAQALASPQRQDDYYQCWQGLQKHFDPEQA 432
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_BORA1 (Homogentisate 1,2-dioxygenase OS=Bordetella avium (strain 197N) GN=hmgA PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.001e-48 Identity = 98/167 (58.68%), Postives = 120/167 (71.86%), Query Frame = -3 Query: 309 PYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYE-ATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHFSYEEA 806 PYKYDL F ++ DH DPSI TVLT+P+D PG A LDF IFPPR L E+TFRPP++HRN SEFMGLI+G Y+AKA+GF PGGASLH+CM+ HGPD T+E A++A SKA + I DTMAFMFE+ + R AL S + DYYQCW L+ HF+ E+A Sbjct: 268 PYKYDLRHFNTIGSISYDHPDPSIFTVLTSPSDTPGTANLDFAIFPPRILAMENTFRPPWFHRNIASEFMGLIQGVYDAKAEGFAPGGASLHNCMSGHGPDADTFEKASVADTSKA--HYIRDTMAFMFETRRVIRPTRQALASAQLQGDYYQCWQDLKKHFNPEKA 432
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_AGRRK (Homogentisate 1,2-dioxygenase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=hmgA PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.001e-48 Identity = 92/161 (57.14%), Postives = 111/161 (68.94%), Query Frame = -3 Query: 324 PYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHF 806 P+KYDL F P +L DH DPSI TVLTAPT+ G A +DFVIFPPRWLVAEHTFRPP+YHRN MSEFMGLI G Y+AK +GF+PGG SLH+ M PHGPD +E A S+ P K+ TMAFMFE+ ++ +A E + +Y +CW GL F Sbjct: 288 PFKYDLRTFSPVGAILFDHPDPSIFTVLTAPTESAGTANVDFVIFPPRWLVAEHTFRPPWYHRNIMSEFMGLIHGQYDAKEEGFVPGGISLHNMMLPHGPDASGFEK--ASNSELKPVKLDHTMAFMFETRYPQQVTKYAAELETLQDNYLECWDGLERRF 446
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_CAUSK (Homogentisate 1,2-dioxygenase OS=Caulobacter sp. (strain K31) GN=hmgA PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.307e-48 Identity = 93/158 (58.86%), Postives = 115/158 (72.78%), Query Frame = -3 Query: 339 MVPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIG 812 + PYKYDL++F TV DH DPSI TVLTAP++ PG A +DFVIFPPRW+VAEHTFRPP++HRN MSEFMGL+ G Y+AKA GF PGGASLH+ M+ HGPD +++A A + P+KI TMAFMFES + R +ALE+ + DY CW G Sbjct: 265 LAPYKYDLARFNTMGTVSFDHPDPSIFTVLTAPSEIPGTANVDFVIFPPRWMVAEHTFRPPWFHRNVMSEFMGLVTGAYDAKAGGFSPGGASLHNMMSDHGPDVASHKA--ASEADLSPHKIEATMAFMFESRWVIRPTKYALETSELQADYDACWTG 420 The following BLAST results are available for this feature:
BLAST of CN185673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185673 ID=CN185673; Name=CN185673; organism=Citrus sinensis; type=EST; length=814bpback to top |