CN185673
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_RHIME (Homogentisate 1,2-dioxygenase OS=Rhizobium meliloti GN=hmgA PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.220e-47 Identity = 91/161 (56.52%), Postives = 109/161 (67.70%), Query Frame = -3 Query: 324 PYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHF 806 PYKYDL F P +L DH DPSI TVLTAP+ + G A +DFVIFPPRWLVAEHTFRPP+YHRN MSEFMGLI G Y+AK +GF+PGG SLH+ M HGPD +E A + P K+ +TMAFMFE+ ++ +A E + DY CW GL F Sbjct: 288 PYKYDLKTFSPVGAILFDHPDPSIFTVLTAPSGEEGTANVDFVIFPPRWLVAEHTFRPPWYHRNIMSEFMGLIYGRYDAKEEGFVPGGMSLHNMMLAHGPDFSGFEK--ASNGELKPVKLDNTMAFMFETRFPQQLTTFAAELDTLQDDYMDCWSGLERKF 446
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_PSEU2 (Homogentisate 1,2-dioxygenase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=hmgA PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.220e-47 Identity = 94/165 (56.97%), Postives = 116/165 (70.30%), Query Frame = -3 Query: 315 VPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHFSYE 809 VPYKYDL +F TV DH DPSI TVLT+P G A +DFVIFPPRW+VAE+TFRPP++HRN M+EFMGLI G Y+AKA+GF+PGGASLH+CM+ HGPD T E IA K P++I +TMAFMFE+ + R AL+ P + DY CW + F+ E Sbjct: 270 VPYKYDLRRFNTIGTVSYDHPDPSIFTVLTSPGAIHGQANIDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLIDGAYDAKAEGFMPGGASLHNCMSAHGPDNVTAEKAIAAELK--PHRIDNTMAFMFETGKVLRPSRHALDCPQLQTDYDACWKDMARTFTQE 432
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_RALSO (Homogentisate 1,2-dioxygenase OS=Ralstonia solanacearum GN=hmgA PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 5.492e-47 Identity = 88/161 (54.66%), Postives = 113/161 (70.19%), Query Frame = -3 Query: 324 PYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHF 806 PYKYDL F ++ DH DPSI VL + +D PGV +DFVIFPPRWL EH+FRPP++HRN SEFMGLI+G Y+AKA+GF+PGGASLH+CMT HGPD +T+E + P+K+ TMAFMFE+ + R +A ES + Y++CW GL+ HF Sbjct: 284 PYKYDLRLFNTIGSISYDHPDPSIFLVLQSVSDTPGVDAIDFVIFPPRWLAMEHSFRPPWFHRNIASEFMGLIQGVYDAKAEGFVPGGASLHNCMTGHGPDAETFEKA-SHADTTQPHKVEATMAFMFETRGVIRPTRFAAESAQLQARYFECWQGLKKHF 443
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_PSESM (Homogentisate 1,2-dioxygenase OS=Pseudomonas syringae pv. tomato GN=hmgA PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 5.492e-47 Identity = 94/167 (56.29%), Postives = 116/167 (69.46%), Query Frame = -3 Query: 309 VPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHFSYEEA 809 VPY YDL +F TV DH DPSI TVLT+P G A +DFVIFPPRW+VAE+TFRPP++HRN M+EFMGLI G Y+AKA+GF+PGG+SLH+CM+ HGPD T E IA K P+KI +TMAFMFE+ + R AL P + DY CW G+ F+ E + Sbjct: 270 VPYTYDLRRFNTIGTVSYDHPDPSIFTVLTSPGAVHGQANIDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLIDGAYDAKAEGFMPGGSSLHNCMSAHGPDNITAEKAIAADLK--PHKIENTMAFMFETGKVLRPSLHALACPQLQADYDACWNGMARTFNKESS 434
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_BURVG (Homogentisate 1,2-dioxygenase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=hmgA PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 7.173e-47 Identity = 87/165 (52.73%), Postives = 115/165 (69.70%), Query Frame = -3 Query: 312 PYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHFSYEE 806 PYKYDL F ++ DH DPSI VL + +D PGV +DFVIFPPRWL AE TFRPP++HRN SEFMGL+ G Y+AKA+GF+PGGASLH+CM+ HGPD T+E A + P+K+ TMAFMFE+ + R +AL++ + DY++CW + HF+ E+ Sbjct: 280 PYKYDLRLFNTIGSISYDHPDPSIFLVLQSQSDSPGVDAIDFVIFPPRWLAAEDTFRPPWFHRNVASEFMGLVHGAYDAKAEGFVPGGASLHNCMSGHGPDADTFEKASAIDT-TRPHKVDATMAFMFETRTLIRPTRYALDTAQLQADYFECWQRIEKHFNPEQ 443
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_RHOP5 (Homogentisate 1,2-dioxygenase OS=Rhodopseudomonas palustris (strain BisA53) GN=hmgA PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.224e-46 Identity = 89/161 (55.28%), Postives = 109/161 (67.70%), Query Frame = -3 Query: 324 PYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHF 806 PYKYDL F P + DH DPSI TVLTAP++ PG A +DFVIFP RW+VA++TFRPP+YH N MSEFMGLI G Y+AK GF+PGGASLH+ M PHGPD + ++ A + P K+T TMAFMFE+ R+ +A S + DY CW GL F Sbjct: 285 PYKYDLRTFSPVGAIGFDHPDPSIFTVLTAPSETPGTANIDFVIFPERWMVADNTFRPPWYHMNIMSEFMGLIYGVYDAKPQGFVPGGASLHNMMLPHGPDREAFDH--ASNGELKPTKLTGTMAFMFETRYPQRVTEYAATSGLLQPDYADCWTGLEKRF 443
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_RHIL3 (Homogentisate 1,2-dioxygenase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=hmgA PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.224e-46 Identity = 88/161 (54.66%), Postives = 110/161 (68.32%), Query Frame = -3 Query: 324 PYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHF 806 P+KYDL F P + DH DPSI +VLTAP++ G A +DFVIFPPRWLVAEHTFRPP+YHRN MSEFMGLI G Y+AK +GF+PGG SLH+ M PHGPD +E A ++ P K+ TMAFMFE+ ++ +A E + +Y +CW GL F Sbjct: 288 PFKYDLRTFSPVGAIRFDHPDPSIFSVLTAPSEDAGTANVDFVIFPPRWLVAEHTFRPPWYHRNIMSEFMGLIHGQYDAKEEGFVPGGISLHNMMLPHGPDALAFEK--ASNTELKPVKLDHTMAFMFETRYAQQLTKYAAELETLQDNYLECWDGLERKF 446
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_PSE14 (Homogentisate 1,2-dioxygenase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=hmgA PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.726e-46 Identity = 94/165 (56.97%), Postives = 114/165 (69.09%), Query Frame = -3 Query: 315 VPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHFSYE 809 V YKYDL +F TV DH DPSI TVLT+P G A +DFVIFPPRW+VAE+TFRPP++HRN M+EFMGLI G Y+AKA+GF+PGGASLH+CM+ HGPD T E IA K P+KI +TMAFMFE+ + R AL P + DY CW + F+ E Sbjct: 270 VAYKYDLRRFNTIGTVSYDHPDPSIFTVLTSPGAAHGQANIDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLIDGAYDAKAEGFMPGGASLHNCMSAHGPDNVTAEKAIAAELK--PHKIENTMAFMFETGKVLRPSRHALGCPQLQADYDACWNDMTRTFNKE 432
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_RHOPT (Homogentisate 1,2-dioxygenase OS=Rhodopseudomonas palustris (strain TIE-1) GN=hmgA PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 4.649e-46 Identity = 87/161 (54.04%), Postives = 109/161 (67.70%), Query Frame = -3 Query: 324 PYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHF 806 PYKYDL + P + DH DPSI TVLT+P++ PG A +DFVIFP RW+VA++TFRPP+YH N MSEFMGLI G Y+AK GF+PGGASLH+ M PHGPD + ++ A + P K+T TMAFMFE+ R+ +A S + DY CW GL F Sbjct: 285 PYKYDLRTYSPVGAIGFDHPDPSIFTVLTSPSETPGTANIDFVIFPERWMVADNTFRPPWYHMNIMSEFMGLIYGVYDAKPQGFVPGGASLHNMMLPHGPDREAFDH--ASNGELKPVKLTGTMAFMFETRYPQRVTEYAASSGLLQDDYADCWNGLEKRF 443
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_RHOPA (Homogentisate 1,2-dioxygenase OS=Rhodopseudomonas palustris GN=hmgA PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 4.649e-46 Identity = 87/161 (54.04%), Postives = 109/161 (67.70%), Query Frame = -3 Query: 324 PYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHF 806 PYKYDL + P + DH DPSI TVLT+P++ PG A +DFVIFP RW+VA++TFRPP+YH N MSEFMGLI G Y+AK GF+PGGASLH+ M PHGPD + ++ A + P K+T TMAFMFE+ R+ +A S + DY CW GL F Sbjct: 285 PYKYDLRTYSPVGAIGFDHPDPSIFTVLTSPSETPGTANIDFVIFPERWMVADNTFRPPWYHMNIMSEFMGLIYGVYDAKPQGFVPGGASLHNMMLPHGPDREAFDH--ASNGELKPVKLTGTMAFMFETRYPQRVTEYAASSGLLQDDYADCWNGLEKRF 443 The following BLAST results are available for this feature:
BLAST of CN185673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185673 ID=CN185673; Name=CN185673; organism=Citrus sinensis; type=EST; length=814bpback to top |