CN185673
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_STRCO (Homogentisate 1,2-dioxygenase OS=Streptomyces coelicolor GN=hmgA PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 9.695e-44 Identity = 84/162 (51.85%), Postives = 110/162 (67.90%), Query Frame = -3 Query: 324 VPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHF 809 VPY YDL +F ++ DH DPSI TVLT+P+D PG+A +DFV+F PRWLV E TFRPPY+HRN MSE+MGLI G Y+AKA+GF+PGG SLH+ M+ HGPD +T++ A ++ P +I D +AFMFE+ + P A + + Y W GL HF Sbjct: 278 VPYVYDLRRFNVIGSISYDHPDPSIFTVLTSPSDTPGLAGVDFVVFAPRWLVGEDTFRPPYFHRNVMSEYMGLIEGAYDAKAEGFVPGGGSLHNMMSAHGPDRETFDR--ASAAELKPQRIDDGLAFMFETRWPVTLTPQAARAEHLQPGYDDVWQGLERHF 437
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_STRAW (Homogentisate 1,2-dioxygenase OS=Streptomyces avermitilis GN=hmgA PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 6.284e-43 Identity = 85/162 (52.47%), Postives = 108/162 (66.67%), Query Frame = -3 Query: 324 VPYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYQCWIGLRSHF 809 VPY YDL +F T+ DH DPSI TVLT+P+D PG+A +DFV+F PRWLV E TFRPPY+HRN MSE+MGLI G Y+AKA GF+PGG SLH+ M+ HGPD +T++ A ++ P KI D +AFMFE+ A + + Y W GL+ HF Sbjct: 275 VPYTYDLRRFNVLGTISYDHPDPSIFTVLTSPSDTPGLAGVDFVVFAPRWLVGEDTFRPPYFHRNVMSEYMGLIEGAYDAKAAGFVPGGGSLHNMMSAHGPDRETFDR--ASAAELRPQKIDDGLAFMFETRWPVTATAQAARAEHLQPAYDDVWQGLQRHF 434
BLAST of CN185673 vs. ExPASy Swiss-Prot
Match: HGD_EMENI (Homogentisate 1,2-dioxygenase OS=Emericella nidulans GN=hmgA PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.640e-41 Identity = 90/165 (54.55%), Postives = 107/165 (64.85%), Query Frame = -3 Query: 324 PYKYDLSKFCPFNTVLVDHGDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAK-ADGFLPGGASLHSCMTPHGPDTKTYEATIARGSKAGPYKITD-TMAFMFESCLIPRICPWALESPFMDHDYY--QCWIGLRSHF 806 PYKYDL +F +V DH DPSI TVLT P+D G A+ DFVIFPPRWLVAE TFRPP+YHRN MSEFMGLI G Y+AK GF P GASLH+ M+ HGPD +E A + P KI D +MAFMFES L+ + W L++ + Y W L+ HF Sbjct: 279 PYKYDLGRFNTMGSVSFDHPDPSIYTVLTGPSDHVGTAIADFVIFPPRWLVAEKTFRPPWYHRNTMSEFMGLITGNYDAKTGGGFQPAGASLHNIMSAHGPDMHAFEG--ASNADLKPTKIGDGSMAFMFESSLMVGVSEWGLKTCQKVQEEYNEHSWQPLKRHF 441 The following BLAST results are available for this feature:
BLAST of CN185673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185673 ID=CN185673; Name=CN185673; organism=Citrus sinensis; type=EST; length=814bpback to top |