CN185671
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185671 vs. ExPASy Swiss-Prot
Match: IF5A2_CAEEL (Eukaryotic translation initiation factor 5A-2 OS=Caenorhabditis elegans GN=iff-2 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 7.120e-37 Identity = 85/155 (54.84%), Postives = 110/155 (70.97%), Query Frame = -2 Query: 328 MSDEEH---HFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLL-TENGNTKDDLRLPTDENLLSQIKDGFESGK-DLVVSVQCAMGEEQI 777 MSD+ H HF + D+GA+ TFP+Q +RKN +++IKGRPCK+VE+STSKTGKHGHAK H V IDIF KKLEDI PS+HN DVP V R +Y L+ I +DG+ SL+ E+ KDDL+LP D L QI+D +E + ++V V A+GEE I Sbjct: 1 MSDDHHDDEHFHT-GDSGAAATFPKQCSALRKNEHVMIKGRPCKIVEMSTSKTGKHGHAKVHMVAIDIFTSKKLEDICPSTHNMDVPVVKRREYLLMAI-DDGYCSLMDPESCEQKDDLKLP-DTELGQQIRDAYEKDEGSVLVQVVSAIGEEAI 152
BLAST of CN185671 vs. ExPASy Swiss-Prot
Match: IF5A_DICDI (Eukaryotic translation initiation factor 5A OS=Dictyostelium discoideum GN=eif5a PE=1 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 3.534e-36 Identity = 74/145 (51.03%), Postives = 107/145 (73.79%), Query Frame = -2 Query: 316 SKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALK 750 ++A +GAS TFP Q +RKNG++VIKG PCK+V++STSKTGKHGHAK + IDIF GKK E+I PS+HN DVP+V+R +Y ++D+ +DG++SLL G K+DL LP D+ + +I + GK+ +VSV A+G+E + ++K Sbjct: 13 AQAGSGASLTFPIQCSALRKNGFVVIKGFPCKIVDMSTSKTGKHGHAKVNITAIDIFTGKKYEEICPSTHNIDVPNVSRKEYTVMDV-QDGYLSLLDAGGEVKEDLALPEDD-IGKEITQMLKEGKEPLVSVISALGKEGVVSVK 155
BLAST of CN185671 vs. ExPASy Swiss-Prot
Match: IF5A1_CAEEL (Eukaryotic translation initiation factor 5A-1 OS=Caenorhabditis elegans GN=iff-1 PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.704e-35 Identity = 81/156 (51.92%), Postives = 109/156 (69.87%), Query Frame = -2 Query: 316 EEHHFESK---ADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLL-TENGNTKDDLRLPTDENLLSQIKDGFESGK-DLVVSVQCAMGEEQINALK 768 E+HH E + A++GA+ TFP+Q +RKN +++I+GRPCK+VE+STSKTGKHGHAK H V IDIF KKLEDI PS+HN DVP V R +Y L+ I EDGF SL+ E+ KDDL++P + +L + I++ E + ++V V A GEE I K Sbjct: 3 EDHHDEEQFDSAESGAAATFPKQCSALRKNEHVMIRGRPCKIVEMSTSKTGKHGHAKVHMVAIDIFTTKKLEDICPSTHNMDVPVVKRREYILMSI-EDGFCSLMDPESCELKDDLKMP-EGDLGNTIREALEKDEGSVLVQVVAACGEEAILGYK 156
BLAST of CN185671 vs. ExPASy Swiss-Prot
Match: IF5A_THEPD (Translation initiation factor 5A OS=Thermofilum pendens (strain Hrk 5) GN=eIF5A PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.110e-16 Identity = 49/132 (37.12%), Postives = 72/132 (54.55%), Query Frame = -2 Query: 328 TFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQI 723 T P++AG I+ +IVI G PCKVVEV SKTGKHG AK VGI F+G K +VP+ +VP + + Q++ D V L+ + ++ +P +E + S++ +G E V V MG +I Sbjct: 3 TRPEEAGNIKVGSFIVIDGEPCKVVEVEKSKTGKHGSAKARIVGIGFFDGGKRSIVVPTDARVEVPIIKKFTAQVVAFVGDN-VQLMNLEDYSTFEIPMPQEEEIKSKLSEGVE------VEVWEVMGRHKI 127
BLAST of CN185671 vs. ExPASy Swiss-Prot
Match: IF5A_SCHMA (Eukaryotic translation initiation factor 5A (Fragment) OS=Schistosoma mansoni PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.218e-13 Identity = 33/50 (66.00%), Postives = 40/50 (80.00%), Query Frame = -2 Query: 592 DAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVG 741 D GASKT P+Q +RK G++V+K RPCK+VE+STSKTGKHG AK H VG Sbjct: 3 DFGASKTLPKQCSALRKGGHVVMKDRPCKIVEMSTSKTGKHGSAKVHLVG 52
BLAST of CN185671 vs. ExPASy Swiss-Prot
Match: IF5A_SULTO (Translation initiation factor 5A OS=Sulfolobus tokodaii GN=eif5a PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.203e-13 Identity = 39/108 (36.11%), Postives = 61/108 (56.48%), Query Frame = -2 Query: 382 GTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFE 705 G ++ Y+VI G PC+VVE+S +KTGKHG AK + V I +F G+K + P +VP + + Q++ D + EN T D+ PTD +++ +I+ G E Sbjct: 9 GDLKVGNYVVIDGEPCRVVEISKAKTGKHGSAKANIVAIGLFTGQKRTLMAPVDQQVEVPIIEKHIGQILADKGDTITIMDMENYET-FDIEKPTDADIVDKIRPGAE 115
BLAST of CN185671 vs. ExPASy Swiss-Prot
Match: IF5A_IGNH4 (Translation initiation factor 5A OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=eIF5A PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.223e-12 Identity = 41/116 (35.34%), Postives = 65/116 (56.03%), Query Frame = -2 Query: 382 SKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFE 729 SKT+ G ++ +I+I G PCK+VE+S +KTGKHG AK H V I + +G K + P +VP + + Q++ I+ D V L+ ++ LP +E L S+++ G E Sbjct: 2 SKTYAT-LGELKPGNFIMIDGEPCKIVEMSKAKTGKHGSAKAHVVAISLISGAKKTFVAPVDTRVEVPIIEKRVGQVLAITGDS-VQLMDMETYDTFEVPLPEEEELKSRLEPGVE 115
BLAST of CN185671 vs. ExPASy Swiss-Prot
Match: IF5A_METS5 (Translation initiation factor 5A OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=eIF5A PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.597e-12 Identity = 45/130 (34.62%), Postives = 70/130 (53.85%), Query Frame = -2 Query: 316 GTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFESGKDLVVSVQCAMGEEQINALK 705 G +++ YIVI G PC+VVEV+ +KTGKHG AK + + + IF G K + P +VP + + Q+I D + E T ++ +PT+E++ S+IK KD V MG ++I +K Sbjct: 9 GEMKEGSYIVIDGEPCRVVEVTKAKTGKHGSAKANIIAVSIFTGAKKTLMAPVDSTVEVPIIEKRMGQVISNVGDKVQIMDLETYET-FEIDMPTEEDVASKIK------KDAEVEYWEVMGRKKIVRVK 131
BLAST of CN185671 vs. ExPASy Swiss-Prot
Match: IF5A_SULAC (Translation initiation factor 5A OS=Sulfolobus acidocaldarius GN=eif5a PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.725e-12 Identity = 37/108 (34.26%), Postives = 61/108 (56.48%), Query Frame = -2 Query: 382 GTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFE 705 G ++ Y++I G PC+VVE++ +KTGKHG AK + V I +F G+K + P +VP + + Q++ D + E+ T DL PT+ ++S+I+ G E Sbjct: 9 GDLKVGSYVMIDGEPCRVVEITKAKTGKHGSAKANVVAIGLFTGQKRSLMAPVDQQVEVPIIEKHVGQILADKGDNLTIMDLESYET-FDLEKPTENEIVSKIRPGAE 115
BLAST of CN185671 vs. ExPASy Swiss-Prot
Match: IF5A_STAMF (Translation initiation factor 5A OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=eIF5A PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.558e-12 Identity = 41/116 (35.34%), Postives = 62/116 (53.45%), Query Frame = -2 Query: 382 SKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVTRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDENLLSQIKDGFE 729 SKT+ G ++ +I+I G PC++VE+S +KTGKHG AK H V I +F G K + P +VP + + Q+I D + E T ++ P+DE L ++K G E Sbjct: 2 SKTYAT-LGELKPGNFIIIDGEPCRIVEMSKAKTGKHGSAKAHVVAIGLFTGNKKTLVAPVDQRVEVPVIEKRVGQIIADMGDLLQVMDMETFET-FEVEKPSDEKLREKLKPGVE 115 The following BLAST results are available for this feature:
BLAST of CN185671 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185671 ID=CN185671; Name=CN185671; organism=Citrus sinensis; type=EST; length=838bpback to top |