CN185653
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185653 vs. ExPASy Swiss-Prot
Match: CP26A_MOUSE (Cytochrome P450 26A1 OS=Mus musculus GN=Cyp26a1 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.572e-14 Identity = 54/231 (23.38%), Postives = 109/231 (47.19%), Query Frame = 3 Query: 3 GSLGLPFLGETLQLIAAY*TENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTD----RVLLMEEANKITFELTVKQLMSFDP-----NEWTESLRKEYVLVIEGFFTVPLPIFSTTYRRAIQARTKVAEALSLVVRHRRKESESGERKNDMLEAL 668 G++G PF GETLQ++ F+ ++ +++G I+ TH+FG PTV + R IL E +L +P S+ +LG L + S HK+ + M + ++ ++LV I V ++ W +L+ E ++ F + ++ L+ +P E + L + + + F++P+ + + R ++AR + + +R + + ++ E +AL Sbjct: 47 GTMGFPFFGETLQMVL-----QRRKFLQMKRRKYGFIYKTHLFGRPTVRVMGADNVRRILLGEHRLVSVHWPASVRTILGAGCLSNLHDSSHKQRKKVIMQAFSREALQCYVLV-IAEEVSSCLEQWLSCGERGLLVYPEVKRLMFRIAMRILLGCEPGPAGGGEDEQQLVEAFEEMTRNLFSLPIDVPFSGLYRGVKARNLIHARIEENIRAKIRRLQATEPDGGCKDAL 271
BLAST of CN185653 vs. ExPASy Swiss-Prot
Match: CP26A_HUMAN (Cytochrome P450 26A1 OS=Homo sapiens GN=CYP26A1 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.665e-14 Identity = 55/235 (23.40%), Postives = 111/235 (47.23%), Query Frame = 3 Query: 3 GSLGLPFLGETLQLIAAY*TENPEPFIDVRVKRFGSIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTD----RVLLMEEANKITFELTVKQLMSFDP-----NEWTESLRKEYVLVIEGFFTVPLPIFSTTYRRAIQARTKVAEALSLVVRHR---RKESESGERKNDMLEALL 671 G++G PF GETLQ++ F+ ++ +++G I+ TH+FG PTV + R IL E +L +P S+ +LG L + S HK+ + M + + ++ V I V ++ W +L+ E ++ F + ++ L+ +P + + L + + + F++P+ + + R ++AR + + +R + + SE+G+ D L+ L+ Sbjct: 47 GTMGFPFFGETLQMVL-----QRRKFLQMKRRKYGFIYKTHLFGRPTVRVMGADNVRRILLGEHRLVSVHWPASVRTILGSGCLSNLHDSSHKQRKKVIMRAFSREALECYVPV-ITEEVGSSLEQWLSCGERGLLVYPEVKRLMFRIAMRILLGCEPQLAGDGDSEQQLVEAFEEMTRNLFSLPIDVPFSGLYRGMKARNLIHARIEQNIRAKICGLRASEAGQGCKDALQLLI 275
BLAST of CN185653 vs. ExPASy Swiss-Prot
Match: C88A1_MAIZE (Cytochrome P450 88A1 OS=Zea mays GN=CYP88A1 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14 Identity = 59/234 (25.21%), Postives = 104/234 (44.44%), Query Frame = 3 Query: 3 GSLGLPFLGETLQLIAAY*TENPEPFIDVRVKRFG--SIFTTHIFGEPTVFSADPETNRFILQNEGKLFECSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIRDHLLVDIDRLVRLHMDSWTDR---VLLMEEANKITFELTVKQLMSFDPNEWTESLRKEYVLVIEGFFTVPLPIFSTTYRRAIQARTKVAEALSLVVRHRRKESESGERKN--DMLEALLAGDD 683 G +G P +G + A+ + P+ FI V+RFG ++ + +F PTV E + +L ++ F +P + L+G S + M H+R+ LT + N L IDR V + +W D V + E ++TF++ V+ + T +L + Y + G + + + YR A++AR ++ L V+ RR G DM++ L+ D Sbjct: 75 GEMGWPLVGGMWAFLRAFKSGKPDAFIASFVRRFGRTGVYRSFMFSSPTVLVTTAEGCKQVLMDDDA-FVTGWPKATVALVGPRSFVAMPYDEHRRIRKLTAAPINGFDALTGYLPFIDRTVTSSLRAWADHGGSVEFLTELRRMTFKIIVQIFLGGADQATTRALERSYTELNYGMRAMAINLPGFAYRGALRARRRLVAVLQGVLDERRAARAKGVSGGGVDMMDRLIEAQD 307 The following BLAST results are available for this feature:
BLAST of CN185653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185653 ID=CN185653; Name=CN185653; organism=Citrus sinensis; type=EST; length=693bpback to top |