CN185648
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: CAID_SALHS (Carnitinyl-CoA dehydratase OS=Salmonella heidelberg (strain SL476) GN=caiD PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.849e-16 Identity = 61/209 (29.19%), Postives = 101/209 (48.33%), Query Frame = 1 Query: 70 TPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCS-GIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPL 693 T N ++ + L+RP + NA+ + +A + +P + +++G G+ F S G DLK + G F+ +T I KPVIA+++G GGG ++ A D C+++A F++ E L I D G + RLP ++ E+ +TGRR EA G+V+RV S EL + R +A+ + +PL Sbjct: 8 TRNGPILEITLDRP-KANAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAEGEAPDADFGPGGFA------------GLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGVVNRVVSQS-ELMESARELAQQLVNSAPL 202
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADJ_SHEHH (Fatty acid oxidation complex subunit alpha OS=Shewanella halifaxensis (strain HAW-EB4) GN=fadJ PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16 Identity = 58/187 (31.02%), Postives = 91/187 (48.66%), Query Frame = 1 Query: 121 NALSREFFTEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEG 672 N L EF E L+ + + ++ +VL SG D F +G D+ L + T+TD + S++ +E PV+A+I+GAC+GGG+++ AC R CS + V EV L + G QRLP +VG A+++ LTG++ +A ++GLV S L V + G Sbjct: 29 NTLRSEFGPEISDVLAEIKADTSIKGLVLVSGKKDSFVAGADISMLDACE---TATDAKQLSQQGHV-------VFNELESLPIPVVAAINGACLGGGLELALACHKRVCSLNPKTMMGVPEVQLGLLPGGGGTQRLPRLVGVTTALDMMLTGKQLRPKQALKMGLVDDAVPESILLRTAVEMALAG 205
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADJ_ESCF3 (Fatty acid oxidation complex subunit alpha OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=fadJ PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16 Identity = 53/181 (29.28%), Postives = 84/181 (46.41%), Query Frame = 1 Query: 121 NALSREFFTEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGV 654 N L EF + L + +N + +V +S D+F +G D+ + + R ++ +I L PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP +VG A+++ LTG++ +A + GLV + S L V Sbjct: 29 NTLKAEFAAQVRAILKEIRENKEIRGVVFISAKADNFIAGADINMIDHCNTAMEAETLARQGQQLMAEIHALP----------VPVIAAIHGACLGGGLELALACHGRICTDDPKTILGLPEVQLGLLPGSGGTQRLPRLVGLSTALDMILTGKQLRPGQALKSGLVDEIVPQSILLQAAV 199
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: ECHA_HUMAN (Trifunctional enzyme subunit alpha, mitochondrial OS=Homo sapiens GN=HADHA PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16 Identity = 53/183 (28.96%), Postives = 99/183 (54.10%), Query Frame = 1 Query: 85 VIYLYLNRPSQR-NALSREFFTEFPKALSSLDQNPNV-NAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 621 V + +N P+ + N LS+E +EF + ++ + + + +A+++S F +G D+ L++ T + + S++ +R V +E+ KP++A+I+G+C+GGG+++ +C R +KD EV L G QRLP +VG A+++ LTGR AK++GLV ++ Sbjct: 49 VAVVRINSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGADINMLAACK---TLQEVTQLSQEAQR-------IVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTVLGTPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQL 221
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: CRTL_DICDI (3-hydroxybutyryl-CoA dehydratase-like protein, mitochondrial OS=Dictyostelium discoideum GN=DDB_G0271866 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16 Identity = 66/231 (28.57%), Postives = 110/231 (47.62%), Query Frame = 1 Query: 10 FFTSAKQMEESYKSIKIEGKTPNSR---VIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPL 693 FF+S+ +E + +E N + + + LN+P Q NAL+ E ++ K + +L ++ ++ +VL+G G F +G DL L T T ++ R E+F R +++ P+I++I+GA IG G + A DIR S A + L I +G + IVG A + L+ G EA+ LGLV + + L + L AE I++ S + Sbjct: 17 FFSSSTTVETKQPLVLLEKHLVNGKYTGIQIVKLNKPKQLNALTFEMGVDYKKVVDTLAEDKDLKCVVLTGEGKAFSAGGDLDFLIERTKDTPENNQ-RIMERFYRTFLYIRSLPV-------PIISAINGAAIGAGFCLALATDIRVVSNKAPVGLTFTKLGIHPGMGVTHSITNIVGQDVASYMLLSSDIIKGDEAQRLGLVLKSVESDQVLPTALNL-AETISKNSTI 238
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: CAID_SALPK (Carnitinyl-CoA dehydratase OS=Salmonella paratyphi A (strain AKU_12601) GN=caiD PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16 Identity = 61/209 (29.19%), Postives = 100/209 (47.85%), Query Frame = 1 Query: 70 TPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCS-GIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPL 693 T N ++ + L+RP + NA+ + +A + +P + +++G G+ F S G DLK + G F+ +T I KPVIA+++G GGG ++ A D C+++A F++ E L I D G + RLP ++ E+ +TGRR EA G+V+RV S EL R +A+ + +PL Sbjct: 8 TRNGPILEITLDRP-KANAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAEGEAPDADFGPGGFA------------GLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGIVNRVVSQS-ELMDSARELAQQLVNSAPL 202
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: CAID_SALPC (Carnitinyl-CoA dehydratase OS=Salmonella paratyphi C (strain RKS4594) GN=caiD PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16 Identity = 61/209 (29.19%), Postives = 100/209 (47.85%), Query Frame = 1 Query: 70 TPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCS-GIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPL 693 T N ++ + L+RP + NA+ + +A + +P + +++G G+ F S G DLK + G F+ +T I KPVIA+++G GGG ++ A D C+++A F++ E L I D G + RLP ++ E+ +TGRR EA G+V+RV S EL R +A+ + +PL Sbjct: 8 TRNGPILEITLDRP-KANAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAEGEAPDADFGPGGFA------------GLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGIVNRVVSQS-ELMDSARELAQQLVNSAPL 202
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: CAID_SALPA (Carnitinyl-CoA dehydratase OS=Salmonella paratyphi A GN=caiD PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16 Identity = 61/209 (29.19%), Postives = 100/209 (47.85%), Query Frame = 1 Query: 70 TPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCS-GIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPL 693 T N ++ + L+RP + NA+ + +A + +P + +++G G+ F S G DLK + G F+ +T I KPVIA+++G GGG ++ A D C+++A F++ E L I D G + RLP ++ E+ +TGRR EA G+V+RV S EL R +A+ + +PL Sbjct: 8 TRNGPILEITLDRP-KANAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAEGEAPDADFGPGGFA------------GLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGIVNRVVSQS-ELMDSARELAQQLVNSAPL 202
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: CAID_SALG2 (Carnitinyl-CoA dehydratase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=caiD PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16 Identity = 61/209 (29.19%), Postives = 100/209 (47.85%), Query Frame = 1 Query: 70 TPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCS-GIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPL 693 T N ++ + L+RP + NA+ + +A + +P + +++G G+ F S G DLK + G F+ +T I KPVIA+++G GGG ++ A D C+++A F++ E L I D G + RLP ++ E+ +TGRR EA G+V+RV S EL R +A+ + +PL Sbjct: 8 TRNGPILEITLDRP-KANAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAEGEAPDADFGSGGFA------------GLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGVVNRVVSQS-ELMDSARELAQQLVNSAPL 202
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: CAID_SALEP (Carnitinyl-CoA dehydratase OS=Salmonella enteritidis PT4 (strain P125109) GN=caiD PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16 Identity = 61/209 (29.19%), Postives = 100/209 (47.85%), Query Frame = 1 Query: 70 TPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCS-GIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPL 693 T N ++ + L+RP + NA+ + +A + +P + +++G G+ F S G DLK + G F+ +T I KPVIA+++G GGG ++ A D C+++A F++ E L I D G + RLP ++ E+ +TGRR EA G+V+RV S EL R +A+ + +PL Sbjct: 8 TRNGPILEITLDRP-KANAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAEGEAPDADFGSGGFA------------GLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGVVNRVVSQS-ELMDSARELAQQLVNSAPL 202 The following BLAST results are available for this feature:
BLAST of CN185648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 206
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185648 ID=CN185648; Name=CN185648; organism=Citrus sinensis; type=EST; length=695bpback to top |