CN185648
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: CAID_SALCH (Carnitinyl-CoA dehydratase OS=Salmonella choleraesuis GN=caiD PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16 Identity = 61/209 (29.19%), Postives = 100/209 (47.85%), Query Frame = 1 Query: 70 TPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCS-GIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPL 693 T N ++ + L+RP + NA+ + +A + +P + +++G G+ F S G DLK + G F+ +T I KPVIA+++G GGG ++ A D C+++A F++ E L I D G + RLP ++ E+ +TGRR EA G+V+RV S EL R +A+ + +PL Sbjct: 8 TRNGPILEITLDRP-KANAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAEGEAPDADFGPGGFA------------GLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGIVNRVVSQS-ELMDSARELAQQLVNSAPL 202
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: CAID_SALA4 (Carnitinyl-CoA dehydratase OS=Salmonella agona (strain SL483) GN=caiD PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16 Identity = 61/209 (29.19%), Postives = 100/209 (47.85%), Query Frame = 1 Query: 70 TPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCS-GIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPL 693 T N ++ + L+RP + NA+ + +A + +P + +++G G+ F S G DLK + G F+ +T I KPVIA+++G GGG ++ A D C+++A F++ E L I D G + RLP ++ E+ +TGRR EA G+V+RV S EL R +A+ + +PL Sbjct: 8 TRNGPILEITLDRP-KANAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAEGEAPDADFGPGGFA------------GLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGIVNRVVSQS-ELMDSARELAQQLVNSAPL 202
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADJ_SALPK (Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi A (strain AKU_12601) GN=fadJ PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.566e-16 Identity = 55/193 (28.50%), Postives = 93/193 (48.19%), Query Frame = 1 Query: 121 NALSREFFTEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLV-AEGIAEKS 687 N L EF + L + +N + +V +S D+F +G D+ + + + R ++ +I+ L PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP +VG A+++ L G++ +A + GLV V + L+ V L E +A+++ Sbjct: 29 NTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINIIGHCQNAQEAETLARQGQQLMAEIQALP----------VPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILIGKQLRARQALKAGLVDDVVPQTILLEAAVELAKKERLAQRT 211
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADJ_SALPA (Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi A GN=fadJ PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.566e-16 Identity = 55/193 (28.50%), Postives = 93/193 (48.19%), Query Frame = 1 Query: 121 NALSREFFTEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLV-AEGIAEKS 687 N L EF + L + +N + +V +S D+F +G D+ + + + R ++ +I+ L PVIA+IHGAC+GGG+++ AC R C+ D + EV L + G QRLP +VG A+++ L G++ +A + GLV V + L+ V L E +A+++ Sbjct: 29 NTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINIIGHCQNAQEAETLARQGQQLMAEIQALP----------VPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILIGKQLRARQALKAGLVDDVVPQTILLEAAVELAKKERLAQRT 211
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: CAID_SALPB (Carnitinyl-CoA dehydratase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=caiD PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.566e-16 Identity = 61/209 (29.19%), Postives = 100/209 (47.85%), Query Frame = 1 Query: 70 TPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCS-GIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPL 693 T N ++ + L+RP + NA+ + +A + +P + +++G G+ F S G DLK + G F+ +T I KPVIA+++G GGG ++ A D C+++A F++ E L I D G + RLP ++ E+ +TGRR EA G+V+RV S EL R +A+ + +PL Sbjct: 8 TRNGPILEITLDRP-KANAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAEGEAPDADFGPGGFA------------GLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGVVNRVVSQS-ELMDSARELAQQLVNSAPL 202
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: CAID_SALDC (Carnitinyl-CoA dehydratase OS=Salmonella dublin (strain CT_02021853) GN=caiD PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.566e-16 Identity = 61/209 (29.19%), Postives = 100/209 (47.85%), Query Frame = 1 Query: 70 TPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCS-GIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPL 693 T N ++ + L+RP + NA+ + +A + +P + +++G G+ F S G DLK + G F+ +T I KPVIA+++G GGG ++ A D C+++A F++ E L I D G + RLP ++ E+ +TGRR EA G+V+RV S EL R +A+ + +PL Sbjct: 8 TRNGPILEITLDRP-KANAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAEGEAPDADFGPGGFA------------GLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGVVNRVVSQS-ELMDSARELAQQLVNSAPL 202
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: CAID_SALAR (Carnitinyl-CoA dehydratase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=caiD PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.566e-16 Identity = 60/209 (28.71%), Postives = 99/209 (47.37%), Query Frame = 1 Query: 70 TPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCS-GIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPL 693 T N ++ + L+RP + NA+ +A S +P++ +++G G+ F S G DLK + G F+ +T + KPVIA+++G GGG ++ A D C+ A F++ E L I D G + RLP I+ ++ +TGRR EA G+V+RV + +EL R +A + + +PL Sbjct: 8 TRNGPILEITLDRP-KANAIDARTSFAMGEAFLSFRDDPHLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFA------------GLTELFDLNKPVIAAVNGYAFGGGFELALAADFIICADHASFALPEAKLGIVPDSGGVLRLPKILPPAIVNDMVMTGRRMTAEEALRWGVVNRVV-SPHELLDSARELARQLVQSAPL 202
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: ECHA6_MYCLE (Probable enoyl-CoA hydratase echA6 OS=Mycobacterium leprae GN=echA6 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.120e-15 Identity = 57/189 (30.16%), Postives = 91/189 (48.15%), Query Frame = 1 Query: 64 GKTPNSRVIYLYLNRPSQRNALSREFFTEFPKAL---SSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 621 G T V+ + L RP +RNAL+ + + +A+ SS D + IVL+G G FC+G DL + D+ R E R + DAV PVI +I+G IG G+ + CD+R + DA+F + D +++RL ++VG+G A + LT + A + G+ +R+ Sbjct: 3 GITQAEGVMTIELQRPERRNALNSQLIEKLREAVQKASSADSEVSTRVIVLTGQGTVFCAGADLSGDAFAADYPD-----RLIELHR-----VMDAVPM------PVIGAINGPAIGAGLQLAMQCDLRVVAPDAYFQFPTSKYGLALDNWSIRRLSSLVGHGRARAMLLTAEKLTADIALQTGMANRI 175
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADJ_VIBVY (Fatty acid oxidation complex subunit alpha OS=Vibrio vulnificus (strain YJ016) GN=fadJ PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.463e-15 Identity = 55/206 (26.70%), Postives = 99/206 (48.06%), Query Frame = 1 Query: 67 KTPNSRVIYLYLNRPSQR-NALSREFFTEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEG 672 K + +L ++ P+++ N L F E + L + + +++ S D+F +G D++ L + + R ++ + + L PV+A+IHG C+GGG+++ ACD R CS D + EV L + G QRLP ++G +++L LTG++ +AK+LG+V + LD + V +G Sbjct: 10 KIDEQNIAWLGIDVPNEKMNTLQAAFADEMKAIFAQLKDSSGLKGLIVHSLKPDNFVAGADVRMLEACKTAPEAEALARQGQELFQQLSDLP----------YPVVAAIHGPCLGGGLELALACDFRVCSDDDATRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAKKLGVVDACVPQTILLDVAKQFVEKG 205
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADJ_VIBHB (Fatty acid oxidation complex subunit alpha OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=fadJ PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.463e-15 Identity = 61/217 (28.11%), Postives = 108/217 (49.77%), Query Frame = 1 Query: 34 EESYKSIKIEGKTPNSRVIYLYLNRPSQR-NALSREFFTEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFC--SKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEG 672 E+ S+KI+ + +L ++ P+++ N L F E + + L V +V+ S D+F +G D++ L + T T+++ +++ + + L D PV+A+IHG C+GGG+++ ACD R C S + EV L + G QRLP ++G +++L LTG++ +AK+LG+V + LD V +G Sbjct: 3 EQKAFSLKID----EQNIAWLAIDVPNEKMNTLQAAFADEMKEIFAQLKDTSGVKGMVIHSLKPDNFVAGADVRMLEACT---TASEAEALAKQGQELFQQLSDLPY-------PVVAAIHGPCLGGGLELALACDYRVCTDSDKTRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAKKLGVVDACVPETVLLDIAKMHVEKG 205 The following BLAST results are available for this feature:
BLAST of CN185648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 206
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185648 ID=CN185648; Name=CN185648; organism=Citrus sinensis; type=EST; length=695bpback to top |