CN185648

Overview
NameCN185648
Unique NameCN185648
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length695
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADJ_VIBVU (Fatty acid oxidation complex subunit alpha OS=Vibrio vulnificus GN=fadJ PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.910e-15
Identity = 55/206 (26.70%), Postives = 99/206 (48.06%), Query Frame = 1
Query:   67 KTPNSRVIYLYLNRPSQR-NALSREFFTEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEG 672
            K     + +L ++ P+++ N L   F  E     + L  +  +  +++ S   D+F +G D++ L +      +    R  ++  + +  L            PV+A+IHG C+GGG+++  ACD R CS D      + EV L +    G  QRLP ++G   +++L LTG++    +AK+LG+V      +  LD   + V +G
Sbjct:   10 KIDEQNIAWLGIDVPNEKMNTLQAAFADEMKAIFAQLKDSSGLKGLIVHSLKPDNFVAGADVRMLEACKTAPEAEALARQGQELFQQLSDLP----------YPVVAAIHGPCLGGGLELALACDFRVCSDDDATRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRANKAKKLGVVDACVPQTILLDVAKQFVEKG 205          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADJ_VIBCH (Fatty acid oxidation complex subunit alpha OS=Vibrio cholerae GN=fadJ PE=3 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.495e-15
Identity = 60/201 (29.85%), Postives = 99/201 (49.25%), Query Frame = 1
Query:   91 YLYLNRPSQR-NALSREFFTEFPKALSSLDQNPNV--NAIVLSGTGDHFCSGIDLKTLS---SVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAF--FSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAE 669
            +L ++ P ++ N L   F  E     ++L++        I+ S   D+F +G D++ L    SV +      +G+   +   D+ F             PV+A+IHG C+GGG+++  ACD R C++D      + EV L +    G  QRLP ++G   A++L LTG++    +AK+LG+V      S  LD   RL+ E
Sbjct:   18 WLAIDVPGEKMNTLQAAFAEEMQAVFATLNEKRGQIKGLIIHSLKPDNFIAGADVRMLEACQSVHEAQALASQGQQMFQQLADLPF-------------PVVAAIHGPCLGGGLELALACDYRVCTEDEVTRLGLPEVMLGLLPGSGGTQRLPRLIGLLPALDLILTGKQLRAKKAKKLGVVDACVPHSVLLDVAKRLLEE 205          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADJ_VIBC3 (Fatty acid oxidation complex subunit alpha OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=fadJ PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.495e-15
Identity = 60/201 (29.85%), Postives = 99/201 (49.25%), Query Frame = 1
Query:   91 YLYLNRPSQR-NALSREFFTEFPKALSSLDQNPNV--NAIVLSGTGDHFCSGIDLKTLS---SVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAF--FSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAE 669
            +L ++ P ++ N L   F  E     ++L++        I+ S   D+F +G D++ L    SV +      +G+   +   D+ F             PV+A+IHG C+GGG+++  ACD R C++D      + EV L +    G  QRLP ++G   A++L LTG++    +AK+LG+V      S  LD   RL+ E
Sbjct:   18 WLAIDVPGEKMNTLQAAFAEEMQAVFATLNEKRGQIKGLIIHSLKPDNFIAGADVRMLEACQSVHEAQALASQGQQMFQQLADLPF-------------PVVAAIHGPCLGGGLELALACDYRVCTEDEVTRLGLPEVMLGLLPGSGGTQRLPRLIGLLPALDLILTGKQLRAKKAKKLGVVDACVPHSVLLDVAKRLLEE 205          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADB_PHOLL (Fatty acid oxidation complex subunit alpha OS=Photorhabdus luminescens subsp. laumondii GN=fadB PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.495e-15
Identity = 56/212 (26.42%), Postives = 90/212 (42.45%), Query Frame = 1
Query:   43 YKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIA 678
            Y+S  I+       +  L  N P+  N L  +      KA++SL+Q   +  ++L      F  G D+    S+ D           EK +  + F       IE    P I++I+G  +GGG + V + D R  S D    + E  L I    G   RLP ++G  NA+++   G+     EA + GL+  V      +D  V ++ + IA
Sbjct:    3 YQSETIQVSWLKDGIAELVFNAPAAINKLDTKTVASLDKAIASLEQQTGLKGVLLRSEKTAFIVGADITEFLSLFDSPV--------EKLQEWLNFSNSIFNRIEDLPVPTISAINGYALGGGCECVLSTDFRVASPDIRIGLPETKLGIMPGFGGSVRLPRLIGTDNALDIIAAGKDIGAEEALKNGLIDAVVPKEKLVDSAVSMLEQAIA 206          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: ECHA6_MYCTU (Probable enoyl-CoA hydratase echA6 OS=Mycobacterium tuberculosis GN=echA6 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.495e-15
Identity = 53/186 (28.49%), Postives = 88/186 (47.31%), Query Frame = 1
Query:   64 GKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 621
            G T    V+ + L RP +RNAL+ +   E  +A+       +  AIVL+G G  FC+G DL   +   D+    DR             L +   A++    PV+ +I+G  IG G+ +   CD+R  + DAFF        +  D  +++RL ++VG+G A  + L+  +     A   G+ +R+
Sbjct:    3 GITQAEAVLTIELQRPERRNALNSQLVEELTQAIRKAGDG-SARAIVLTGQGTAFCAGADLSGDAFAADYP---DR-------------LIELHKAMDASPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQFPTSKYGLALDNWSIRRLSSLVGHGRARAMLLSAEKLTAEIALHTGMANRI 171          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: ECHA6_MYCBO (Probable enoyl-CoA hydratase echA6 OS=Mycobacterium bovis GN=echA6 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.495e-15
Identity = 53/186 (28.49%), Postives = 88/186 (47.31%), Query Frame = 1
Query:   64 GKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 621
            G T    V+ + L RP +RNAL+ +   E  +A+       +  AIVL+G G  FC+G DL   +   D+    DR             L +   A++    PV+ +I+G  IG G+ +   CD+R  + DAFF        +  D  +++RL ++VG+G A  + L+  +     A   G+ +R+
Sbjct:    3 GITQAEAVLTIELQRPERRNALNSQLVEELTQAIRKAGDG-SARAIVLTGQGTAFCAGADLSGDAFAADYP---DR-------------LIELHKAMDASPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQFPTSKYGLALDNWSIRRLSSLVGHGRARAMLLSAEKLTAEIALHTGMANRI 171          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: CDYL_RAT (Chromodomain Y-like protein OS=Rattus norvegicus GN=Cdyl PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.256e-15
Identity = 63/209 (30.14%), Postives = 102/209 (48.80%), Query Frame = 1
Query:    1 RLAFFTSAKQMEESYKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGID-LKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVF 624
            RL F  S +Q E +Y+   I  +  +     L   + S+ N+L+ E   E   ALS+   + +   ++LS  G  FC G+D +  +  +TD     DR R S K    IR   + V    + +KP+I +++G  IG G  I+  CD+ + ++ A+F         + D  +    P I+G  +A E+ L+GR+    EA   GLVS+VF
Sbjct:  318 RLRF--SVRQTESAYRYRDIVVRKQDGFTHILLSTKSSENNSLNPEVMKEVQSALSTAAADDS-KLVLLSAVGSVFCCGLDFIYFIRRLTD-----DRKRESTKMAEAIR---NFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVF 515          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: CDYL1_HUMAN (Chromodomain Y-like protein OS=Homo sapiens GN=CDYL PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.256e-15
Identity = 63/209 (30.14%), Postives = 102/209 (48.80%), Query Frame = 1
Query:    1 RLAFFTSAKQMEESYKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGID-LKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVF 624
            RL F  S +Q E +Y+   I  +  +     L   + S+ N+L+ E   E   ALS+   + +   ++LS  G  FC G+D +  +  +TD     DR R S K    IR   + V    + +KP+I +++G  IG G  I+  CD+ + ++ A+F         + D  +    P I+G  +A E+ L+GR+    EA   GLVS+VF
Sbjct:  327 RLRF--SVRQTESAYRYRDIVVRKQDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADDS-KLVLLSAVGSVFCCGLDFIYFIRRLTD-----DRKRESTKMAEAIR---NFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVF 524          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADJ_VIBPA (Fatty acid oxidation complex subunit alpha OS=Vibrio parahaemolyticus GN=fadJ PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.558e-15
Identity = 53/200 (26.50%), Postives = 102/200 (51.00%), Query Frame = 1
Query:   85 VIYLYLNRPSQR-NALSREFFTEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCS--KDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEG 672
            + +L ++ P+++ N L   F  E  +  + L  +  +  +++ S   D+F +G D++ L + T   T+ +    +++ +   + L D          PV+A+IHG C+GGG+++  ACD R C+        + EV L +    G  QRLP ++G   +++L LTG++    +AK+LG+V      +  LD   + + +G
Sbjct:   16 IAWLAIDVPNEKMNTLQAAFADEMKEIFAQLKDSSGIKGMIIHSLKPDNFVAGADVRMLEACT---TANEAQALAKQGQELFQQLSDLPY-------PVVAAIHGPCLGGGLELALACDYRVCTDFDKTRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAKKLGVVDACVPDTILLDVAKQFIDKG 205          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADJ_ENTS8 (Fatty acid oxidation complex subunit alpha OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=fadJ PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.481e-15
Identity = 57/212 (26.89%), Postives = 100/212 (47.17%), Query Frame = 1
Query:   37 ESYKSIKIEGKTPNSRVIYLYLNRPSQR-NALSREFFTEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRL 660
            ES  +  ++ +  N  V+ + +  P ++ N L  EF  +    + +L +N ++  +V +S   D+F +G D+  ++       +       ++   +IR L             V+A+IHGAC+GGG+++  AC  R C+ D      + EV L +    G  QRLP +VG   A+E+ L G++    +A + GLV  V   S  L+    L
Sbjct:    2 ESTSAFNLQMRPDNVAVVTIDV--PGEKMNTLKAEFARDVRAIVKTLRENRDLAGVVFISAKPDNFIAGADINMIAHCQSAQEAEALASQGQQIMAEIRALP----------VHVVAAIHGACLGGGLELALACHSRICTDDVKTLLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILAGKQLRPRQALKAGLVDDVVPQSILLEAAAEL 201          
The following BLAST results are available for this feature:
BLAST of CN185648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 206
Match NameE-valueIdentityDescription
FADJ_VIBVU1.910e-1526.70Fatty acid oxidation complex subunit alpha OS=Vibr... [more]
FADJ_VIBCH2.495e-1529.85Fatty acid oxidation complex subunit alpha OS=Vibr... [more]
FADJ_VIBC32.495e-1529.85Fatty acid oxidation complex subunit alpha OS=Vibr... [more]
FADB_PHOLL2.495e-1526.42Fatty acid oxidation complex subunit alpha OS=Phot... [more]
ECHA6_MYCTU2.495e-1528.49Probable enoyl-CoA hydratase echA6 OS=Mycobacteriu... [more]
ECHA6_MYCBO2.495e-1528.49Probable enoyl-CoA hydratase echA6 OS=Mycobacteriu... [more]
CDYL_RAT4.256e-1530.14Chromodomain Y-like protein OS=Rattus norvegicus G... [more]
CDYL1_HUMAN4.256e-1530.14Chromodomain Y-like protein OS=Homo sapiens GN=CDY... [more]
FADJ_VIBPA5.558e-1526.50Fatty acid oxidation complex subunit alpha OS=Vibr... [more]
FADJ_ENTS89.481e-1526.89Fatty acid oxidation complex subunit alpha OS=Ente... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001K16_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001K16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185648 ID=CN185648; Name=CN185648; organism=Citrus sinensis; type=EST; length=695bp
AGGCTTGCCTTTTTCACATCAGCCAAACAGATGGAAGAGAGTTACAAATC
GATAAAAATCGAGGGAAAAACTCCAAATTCTCGAGTCATTTATCTGTATC
TTAACCGTCCATCGCAACGCAACGCACTATCACGTGAATTCTTCACTGAA
TTCCCTAAGGCCTTATCTTCCCTCGACCAAAATCCTAACGTCAACGCCAT
CGTCCTCTCAGGCACCGGCGACCACTTCTGCTCCGGAATCGATCTGAAAA
CACTAAGTTCGGTCACCGACCATACCACTTCCACCGACCGCGGCCGCTTC
TCCGAGAAGTTCCGGCGAGATATCAGGTTCTTGCAGGATGCGGTAACTGC
CATCGAGCGATGTCGGAAGCCAGTCATCGCATCTATCCACGGGGCGTGTA
TCGGAGGCGGCGTCGATATTGTCACTGCCTGTGATATTCGGTTCTGTTCA
AAAGATGCTTTTTTTTCGGTCAAAGAGGTTGACTTGGCTATCACGGCAGA
TCTCGGGACTTTACAGAGGCTTCCGGCGATTGTCGGGTATGGTAACGCGA
TGGAATTGGCGTTGACGGGTCGTAGGTTTTGGGGTTTGGAGGCTAAGGAG
TTGGGTCTGGTTTCTCGGGTTTTCGGGACGAGTTATGAATTGGATCAGGG
TGTCAGGCTTGTTGCCGAGGGAATTGCTGAAAAATCTCCTCTTGC
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