CN185648
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADB_SHESA (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain ANA-3) GN=fadB PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.202e-13 Identity = 54/217 (24.88%), Postives = 89/217 (41.01%), Query Frame = 1 Query: 43 YKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRK---PVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEK 684 Y+S I+ + + L N P N RE AL S+ Q N+ A+VL+ D F G D+ G F++ + +++ A + P ++I G +GGG + + A D R A + E L I G RLP ++G NA+E TG+ +A ++G V V ++++ + +AEK Sbjct: 3 YQSPTIQVELLEDNIAKLCFNAPGSVNKFDRETLASLDAALDSIKQQSNIQALVLTSGKDTFIVGADITEFL-----------GLFAQDDAVLLSWIEQANAVFNKLEDLPFPTASAIKGFALGGGCETILATDFRIADTTAKIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQRPEDALKVGAVDAVVAPEALEAAAIQMLKDAVAEK 208
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADB_SHEON (Fatty acid oxidation complex subunit alpha OS=Shewanella oneidensis GN=fadB PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.202e-13 Identity = 54/217 (24.88%), Postives = 88/217 (40.55%), Query Frame = 1 Query: 43 YKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRK---PVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEK 684 Y+S I+ + + L N P N RE AL S+ Q N+ A+VL+ D F G D+ G F++ + +++ A + P ++I G +GGG + + A D R A + E L I G RLP ++G NA+E TG +A ++G V V ++++ + +AEK Sbjct: 3 YQSPTIQVELLEDNIAKLCFNAPGSVNKFDRETLASLDAALDSIKQQSNIQALVLTSGKDTFIVGADITEFL-----------GLFAQDDAVLLSWVEQANAVFNKLEDLPFPTASAIKGFALGGGCETILATDFRIADTTAKIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGNEQRAEDALKVGAVDAVVAPEALEVAAIQMLKDAVAEK 208
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: ECH17_MYCPA (Probable enoyl-CoA hydratase echA17 OS=Mycobacterium paratuberculosis GN=echA17 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.202e-13 Identity = 57/193 (29.53%), Postives = 90/193 (46.63%), Query Frame = 1 Query: 43 YKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 621 + S+ + + ++ + L ++RP NALSR+ + E A L + +V A++L G + F +G D+ L ++ RG +E R R DAV AI KP +A+I G +G G+ + A D R + F E+ + L RL + G A EL +GR F EA LGL+ + Sbjct: 7 FVSVVVSDGSRDAGLAMLLVSRPPT-NALSRQVYREVIAAADELGRRDDVAAVILFGGHEIFSAGDDMPELRTL--------RGAEAETAARVRRDAIDAVAAIP---KPTVAAITGYALGAGLTLALAADWRISGDNVKFGATEILAGLVPGGDALARLTRVAGASKAKELVFSGRFFDAEEALALGLIDEM 187
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: ECH17_MYCA1 (Probable enoyl-CoA hydratase echA17 OS=Mycobacterium avium (strain 104) GN=echA17 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.202e-13 Identity = 57/193 (29.53%), Postives = 90/193 (46.63%), Query Frame = 1 Query: 43 YKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 621 + S+ + + ++ + L ++RP NALSR+ + E A L + +V A++L G + F +G D+ L ++ RG +E R R DAV AI KP +A+I G +G G+ + A D R + F E+ + L RL + G A EL +GR F EA LGL+ + Sbjct: 7 FVSVVVSDGSRDAGLAMLLVSRPPT-NALSRQVYREVIAAADELGRRDDVAAVILFGGHEIFSAGDDMPELRTL--------RGAEAETAARVRRDAIDAVAAIP---KPTVAAITGYALGAGLTLALAADWRISGDNVKFGATEILAGLVPGGDALARLTRVAGASKAKELVFSGRFFDAEEALALGLIDEM 187
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: ECH14_MYCTU (Probable enoyl-CoA hydratase echA14 OS=Mycobacterium tuberculosis GN=echA14 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.202e-13 Identity = 50/182 (27.47%), Postives = 78/182 (42.86%), Query Frame = 1 Query: 76 NSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 621 + V + +N P +RNA++ E + A+ + +P+V+A+V++G G FC+G DL L + R L D A+ C P IA+++GA +G G+++ A D+R A F + L + G L VG A L G F A GL V Sbjct: 12 DKHVALITVNDPDRRNAVTDEMSAQLRAAIQRAEGDPDVHAVVVTGAGKAFCAGADLSALGAGVGDPAEPRLLR-----------LYDGFMAVSSCNLPTIAAVNGAAVGAGLNLALAADVRIAGPAALFDARFQKLGLHPGGGATWMLQRAVGPQVARAALLFGMCFDAESAVRHGLALMV 182
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: ECH14_MYCBO (Probable enoyl-CoA hydratase echA14 OS=Mycobacterium bovis GN=echA14 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.202e-13 Identity = 50/182 (27.47%), Postives = 78/182 (42.86%), Query Frame = 1 Query: 76 NSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 621 + V + +N P +RNA++ E + A+ + +P+V+A+V++G G FC+G DL L + R L D A+ C P IA+++GA +G G+++ A D+R A F + L + G L VG A L G F A GL V Sbjct: 12 DKHVALITVNDPDRRNAVTDEMSAQLRAAIQRAEGDPDVHAVVVTGAGKAFCAGADLSALGAGVGDPAEPRLLR-----------LYDGFMAVSSCNLPTIAAVNGAAVGAGLNLALAADVRIAGPAALFDARFQKLGLHPGGGATWMLQRAVGPQVARAALLFGMCFDAESAVRHGLALMV 182
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADB_SHESR (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain MR-7) GN=fadB PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.794e-13 Identity = 54/217 (24.88%), Postives = 89/217 (41.01%), Query Frame = 1 Query: 43 YKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRK---PVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEK 684 Y+S I+ + + L N P N RE AL S+ Q N+ A+VL+ D F G D+ G F++ + +++ A + P ++I G +GGG + + A D R A + E L I G RLP ++G NA+E TG+ +A ++G V V ++++ + +AEK Sbjct: 3 YQSPTIQVELLEDNIAKLCFNAPGSVNKFDRETLASLDAALDSIKQQSNIQALVLTSGKDTFIVGADITEFL-----------GLFAQDDAVLLSWVEQANAVFNKLEDLPFPTASAIKGFALGGGCETILATDFRIADTTAKIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQRPEDALKVGAVDAVVAPEALEAAAIQMLKDAVAEK 208
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADB_SHESM (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain MR-4) GN=fadB PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.794e-13 Identity = 54/217 (24.88%), Postives = 89/217 (41.01%), Query Frame = 1 Query: 43 YKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRK---PVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEK 684 Y+S I+ + + L N P N RE AL S+ Q N+ A+VL+ D F G D+ G F++ + +++ A + P ++I G +GGG + + A D R A + E L I G RLP ++G NA+E TG+ +A ++G V V ++++ + +AEK Sbjct: 3 YQSPTIQVELLEDNIAKLCFNAPGSVNKFDRETLASLDAALDSIKQQSNIQALVLTSGKDTFIVGADITEFL-----------GLFAQDDAVLLSWVEQANAVFNKLEDLPFPTASAIKGFALGGGCEAILATDFRIADTTAKIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQRPEDALKVGAVDAVVAPEALEAAAIQMLKDAVAEK 208
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: ECHP_CAVPO (Peroxisomal bifunctional enzyme OS=Cavia porcellus GN=EHHADH PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 6.794e-13 Identity = 50/189 (26.46%), Postives = 83/189 (43.92%), Query Frame = 1 Query: 67 KTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTS 633 + P+S + N P NA+S + L + + IV+SG + FC+G D+ S+ T + G V ++R KPV+A+I G +GGG+++ C R +A EV L I Q LP ++G A++L +GR EA +LG++ +V ++ Sbjct: 6 RLPHSLALIRLRNPPV--NAISPAVIHGIKEGLQKAMSDYTIKGIVISGANNIFCAGADIHGFSAPLSFGTGSGLGPI--------------VDEMQRYEKPVVAAIQGMALGGGLELSLGCHYRIAHAEARIGFPEVTLGILPGARGTQLLPRLIGVPAALDLITSGRHITAGEALKLGILDKVVNSA 178
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: HIBCH_XENLA (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus laevis GN=hibch PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.874e-13 Identity = 57/200 (28.50%), Postives = 96/200 (48.00%), Query Frame = 1 Query: 100 LNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDH-FCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAV--TAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSP 690 LNRP NAL+ + L +++P +++ G G FC+G D++ + TD G+ ++ +D F ++ + AI C+KP +A I G +GGGV + R S+ F++ E + + D+G LP + G + LALTG R G + ++ G+ + F S +L L + +A KSP Sbjct: 50 LNRPKALNALNLGMIRQIYPQLKLWEEDPETYLVIIKGAGGKAFCAGGDIRAV---------TDAGKVGDRLAQDF-FREEYILNNAIGTCKKPYVAVIDGITMGGGVGLSVHGHFRVASEKTLFAMPETAIGLFPDVGGGYFLPRLTG-KLGLYLALTGFRLKGSDVQKAGIATH-FVESEKLSS---LEQDLVAMKSP 234 The following BLAST results are available for this feature:
BLAST of CN185648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 206
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185648 ID=CN185648; Name=CN185648; organism=Citrus sinensis; type=EST; length=695bpback to top |