CN185648

Overview
NameCN185648
Unique NameCN185648
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length695
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: CDY1_HUMAN (Testis-specific chromodomain protein Y 1 OS=Homo sapiens GN=CDY1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.674e-11
Identity = 52/231 (22.51%), Postives = 106/231 (45.89%), Query Frame = 1
Query:    1 RLAFFTSAKQMEESYKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPL 693
            ++ F     +   +Y+ I ++ +   ++++     R +++NAL+ E   E   AL+S   + +   ++ S  G  FC G+D         +  +T      +        +++ V    + +KP++ S++G  IG G  I+  CD+ + ++ A+F         + D  +    P ++G  +A E+ + GR+    EA   GLVS+VF T     Q V +  + +A  +P+
Sbjct:  269 KMHFTIRLTESASTYRDIVVKKEDGFTQIVLS--TRSTEKNALNTEVIKEIVNALNSAAADDS-KLVLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDT-------IKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTG-TFTQEVMIQIKELASYNPI 488          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: PECI_HUMAN (Peroxisomal 3,2-trans-enoyl-CoA isomerase OS=Homo sapiens GN=PECI PE=1 SV=4)

HSP 1 Score: 69.3218 bits (168), Expect = 2.186e-11
Identity = 49/188 (26.06%), Postives = 87/188 (46.28%), Query Frame = 1
Query:   70 TPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTS 633
            T    +  +  NRP ++NA++ E + E  +AL +  ++ ++   VL+G GD++ SG DL   + +         G   EK + +   L++ V       KP+IA ++G  +G  V ++   D  + S  A F      L  + +  +    P I+    A E+ + G++    EA   GLV+ VF  S
Sbjct:  145 TSEDGITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPP-------GGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDS 324          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADB_VIBSL (Fatty acid oxidation complex subunit alpha OS=Vibrio splendidus (strain LGP32) GN=fadB PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.186e-11
Identity = 49/214 (22.90%), Postives = 87/214 (40.65%), Query Frame = 1
Query:   43 YKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEK 684
            Y++  ++ K     +  L    P+  N L         KAL +L+ +  +  ++L+   D F  G D+     +          +   +    +RF     + +E    P ++ + G  +GGG + V A D R   K     + E  L I    G   RLP ++G  +AME+   G+     EA ++GL+  +  T   L+  +  V+    EK
Sbjct:    3 YQANTLQVKELQDGIAELSFCAPASVNKLDLATLESLDKALDALNAHAGLRGLILTSNKDAFIVGADITEFLGLF--------AKPEAELDEWLRFANSIFSKLEDLPVPTLSMMRGHALGGGCECVLATDFRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADSAMEIITQGKACRADEALKVGLLDAIVETDQLLESAINTVSLAANEK 208          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: CDY2_HUMAN (Testis-specific chromodomain protein Y 2 OS=Homo sapiens GN=CDY2A PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.855e-11
Identity = 50/205 (24.39%), Postives = 94/205 (45.85%), Query Frame = 1
Query:   40 SYKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRD--------IRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGT 630
            +Y+ I ++ +   ++++     R +++NAL+ E   E   AL+S   + +   ++ S  G  FC G+D                G F    R D        +  +++ V    + +KP++ S++G  IG G  I+  CD+ + ++ A+F         + D  +    P ++G  +A E+ + GR+    EA   GLVS+VF T
Sbjct:  283 TYRDIVVKKEDGFTQIVLS--TRSTEKNALNTEVIKEMVNALNSAAADDS-KLVLFSAAGSVFCCGLDF---------------GYFVRHLRNDRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLT 469          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: PKSI_BACSU (Putative polyketide biosynthesis enoyl-CoA isomerase pksI OS=Bacillus subtilis GN=pksI PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.728e-11
Identity = 53/203 (26.11%), Postives = 95/203 (46.80%), Query Frame = 1
Query:   79 SRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTS-TDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEK 684
            S +I + +   + +NA S+E   +  +A   + QNP   A++L+G  ++F SG   + L  +    T  TD   +S               A++ C  PVIA++ G  IGGG  +    DI   S+++ ++   +    T  +G    +P  +G+  A E+ L    + G + ++ G+  +V   +  LD  V L A+ +AEK
Sbjct:   13 SAIIQVKMQDRTHKNAFSQELTDDLIQAFEYIRQNPKYKAVILTGYDNYFASGGTQEGLLRIQQGLTKFTDDNLYS--------------LALD-CEIPVIAAMQGHGIGGGFVMGLFADIVILSRESVYTANFMKYGFTPGMGATFIVPKKLGFSLAQEILLNAGSYRGADLEKRGVPFKVLPRAEVLDYAVEL-AQELAEK 199          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADB_SHEWM (Fatty acid oxidation complex subunit alpha OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=fadB PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.728e-11
Identity = 53/217 (24.42%), Postives = 90/217 (41.47%), Query Frame = 1
Query:   43 YKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDA---VTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEK 684
            Y+S  I+ +     +  L  N     N L RE       AL ++ Q+ N+  +VL+     F  G D+               G F+++    + ++ +A      IE    P I++I+G  +GGG + V A D R     A   + E  L +    G   RLP ++G  NA+E   TG+      A ++G +  V          + ++ E ++EK
Sbjct:    3 YQSPTIQVELLEDNIARLCFNAAGSVNKLDRETIDSLNAALDAIKQDTNIQGLVLTSGKGAFIVGADITEFL-----------GLFAQEESVLLPWIAEANVVFNKIEDLPFPTISAINGFALGGGFETVLATDFRIADTTAKLGLPETKLGLIPGFGGTVRLPRLIGADNALEWITTGKDHKPEAALKVGAIDAVVAPENLEASAIAMLKEALSEK 208          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADB_SHESH (Fatty acid oxidation complex subunit alpha OS=Shewanella sediminis (strain HAW-EB3) GN=fadB PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.728e-11
Identity = 50/217 (23.04%), Postives = 91/217 (41.94%), Query Frame = 1
Query:   43 YKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRK---PVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEK 684
            Y+S  I+ +     +  L  N     N L RE       AL ++ Q+ ++ A+VL+     F  G D+               G F+++    + ++ +A     +      P I++I+G  +GGG + V A D R     A   + E  L +    G   RLP ++G  NA+E   +G+      A ++G +  V          ++++ + +AEK
Sbjct:    3 YQSPTIQVELLEDNIARLCFNASGSVNKLDRETINSLDAALDAIQQDSHIQALVLTSAKGAFIVGADITEFL-----------GLFAQEDSVLLPWIAEANVVFNKLEDLPFPTISAINGFALGGGFETVLATDFRIADTTAKIGLPETKLGLIPGFGGTVRLPRLIGTDNALEWITSGKDQRPEAALKVGAIDAVVAPENLQASAIKMLKDALAEK 208          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADB_SHEHH (Fatty acid oxidation complex subunit alpha OS=Shewanella halifaxensis (strain HAW-EB4) GN=fadB PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.728e-11
Identity = 52/217 (23.96%), Postives = 89/217 (41.01%), Query Frame = 1
Query:   43 YKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRK---PVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEK 684
            Y+S  IE +     + +L        N   RE       AL S+ Q+ ++ A++LS   D F  G D+               G F+E+      +L+ A     +      P +++I+G  +G G + + A D R     A   + E  L I    G   RLP ++G  NA+E   +G+      A ++G +  V          +R++ + +AEK
Sbjct:    3 YQSPTIEVELLEDNIAHLCFKAQGSVNKFDRETIDSLNAALDSIKQDTSIKALMLSSAKDAFIVGADITEFL-----------GLFAEEDAVLQSWLEQANVVFNKLEDLPFPTLSAINGFALGAGCETILATDFRIADTTARIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITSGKDQRPDAALKVGAIDAVVAPEQLRPAALRMLKDAMAEK 208          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: ECHP_HUMAN (Peroxisomal bifunctional enzyme OS=Homo sapiens GN=EHHADH PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 3.728e-11
Identity = 45/167 (26.95%), Postives = 73/167 (43.71%), Query Frame = 1
Query:  121 NALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 621
            NA+S     +  + L     +  + AIV+ G    F +G D++  S+      +                L   V  I+R  KPV+A+I G   GGG+++   C  R    +A   + EV L +       Q LP + G   A++L  +GRR    EA +LG++ +V
Sbjct:   22 NAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIRGFSAPRTFGLT----------------LGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKV 172          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: MENB_HAEIN (Naphthoate synthase OS=Haemophilus influenzae GN=menB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11
Identity = 55/197 (27.92%), Postives = 84/197 (42.64%), Query Frame = 1
Query:   37 ESYKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDH-FCSGIDLKTLSSVTDHTTSTDRGRFSE-KFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 621
            E Y  I+    T    +  + +NRP  RNA   +   E   A S    + N+  IVL+G G+  FCSG D K       +   +     +   F+RDIR           C KPV+A + G  IGGG  +   CD+   +++A F      +           +  +VG   A E+    R++   EA ++GLV+ V
Sbjct:   20 EGYSDIRYHKSTDG--IAKITINRPEVRNAFRPQTVKEMMTAFSDARFDENIGVIVLTGEGEKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRDIR----------SCPKPVVAMVAGYAIGGGHVLHMLCDLTIAAENAIFGQTGPKVGSFDGGWGASYMARLVGQKKAREIWFLCRQYNAQEALDMGLVNTV 204          
The following BLAST results are available for this feature:
BLAST of CN185648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 206
Match NameE-valueIdentityDescription
CDY1_HUMAN1.674e-1122.51Testis-specific chromodomain protein Y 1 OS=Homo s... [more]
PECI_HUMAN2.186e-1126.06Peroxisomal 3,2-trans-enoyl-CoA isomerase OS=Homo ... [more]
FADB_VIBSL2.186e-1122.90Fatty acid oxidation complex subunit alpha OS=Vibr... [more]
CDY2_HUMAN2.855e-1124.39Testis-specific chromodomain protein Y 2 OS=Homo s... [more]
PKSI_BACSU3.728e-1126.11Putative polyketide biosynthesis enoyl-CoA isomera... [more]
FADB_SHEWM3.728e-1124.42Fatty acid oxidation complex subunit alpha OS=Shew... [more]
FADB_SHESH3.728e-1123.04Fatty acid oxidation complex subunit alpha OS=Shew... [more]
FADB_SHEHH3.728e-1123.96Fatty acid oxidation complex subunit alpha OS=Shew... [more]
ECHP_HUMAN3.728e-1126.95Peroxisomal bifunctional enzyme OS=Homo sapiens GN... [more]
MENB_HAEIN4.869e-1127.92Naphthoate synthase OS=Haemophilus influenzae GN=m... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001K16_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001K16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185648 ID=CN185648; Name=CN185648; organism=Citrus sinensis; type=EST; length=695bp
AGGCTTGCCTTTTTCACATCAGCCAAACAGATGGAAGAGAGTTACAAATC
GATAAAAATCGAGGGAAAAACTCCAAATTCTCGAGTCATTTATCTGTATC
TTAACCGTCCATCGCAACGCAACGCACTATCACGTGAATTCTTCACTGAA
TTCCCTAAGGCCTTATCTTCCCTCGACCAAAATCCTAACGTCAACGCCAT
CGTCCTCTCAGGCACCGGCGACCACTTCTGCTCCGGAATCGATCTGAAAA
CACTAAGTTCGGTCACCGACCATACCACTTCCACCGACCGCGGCCGCTTC
TCCGAGAAGTTCCGGCGAGATATCAGGTTCTTGCAGGATGCGGTAACTGC
CATCGAGCGATGTCGGAAGCCAGTCATCGCATCTATCCACGGGGCGTGTA
TCGGAGGCGGCGTCGATATTGTCACTGCCTGTGATATTCGGTTCTGTTCA
AAAGATGCTTTTTTTTCGGTCAAAGAGGTTGACTTGGCTATCACGGCAGA
TCTCGGGACTTTACAGAGGCTTCCGGCGATTGTCGGGTATGGTAACGCGA
TGGAATTGGCGTTGACGGGTCGTAGGTTTTGGGGTTTGGAGGCTAAGGAG
TTGGGTCTGGTTTCTCGGGTTTTCGGGACGAGTTATGAATTGGATCAGGG
TGTCAGGCTTGTTGCCGAGGGAATTGCTGAAAAATCTCCTCTTGC
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