CN185648

Overview
NameCN185648
Unique NameCN185648
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length695
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: ECHD2_MOUSE (Enoyl-CoA hydratase domain-containing protein 2, mitochondrial OS=Mus musculus GN=Echdc2 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 5.190e-21
Identity = 64/198 (32.32%), Postives = 99/198 (50.00%), Query Frame = 1
Query:   52 IKIEGKT-PNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYE 639
            I+++  T PN  +  + +NRP+ RNAL   F +E  +AL+ L ++  V  ++  S     FC+G DLK    ++D    T        F + +R L   + A      P IA++ G  +GGG+++  ACD+R  +  A   + E    +    G  QRLP  +G   A EL  TGRR  G +A+ELGLV+     + E
Sbjct:   34 IQVQALTGPNQGITEILMNRPNARNALGNVFVSELLEALAQLREDQQVRVLLFRSAVKGVFCAGADLKEREQMSDVEVGT--------FVQRLRGLMSEIAAFP---VPTIAAMDGFALGGGLELALACDLRIAASSAVMGLIETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLNGAQARELGLVNHAVAQNEE 220          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: ECH12_MYCLE (Probable enoyl-CoA hydratase echA12 OS=Mycobacterium leprae GN=echA12 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.779e-21
Identity = 63/197 (31.98%), Postives = 100/197 (50.76%), Query Frame = 1
Query:   73 PNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITA-DLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVS------RVFGTSYEL 642
            P   V  + LNRP + N+++ +      + L  +  + +V  +VL+G G  FCSG D K  + V      T   R      R +  L++ + A+ R  +PVIA+I+G  IGGG+ +  A D+R  S  A+F    ++  ++A +LG    LP  VG   A E+ L+GR     EA+++GLVS      R+  T Y +
Sbjct:   27 PRPEVALITLNRPGRMNSMALDLMKSLKQVLKRITYDHSVRVVVLTGAGRGFCSGADQKFTAPVPQVEGLTQPVRAL----RAMELLEEVILALRRLHQPVIAAINGPAIGGGLCLALAADVRVASTRAYFRAAGINNGLSASELGLSYLLPRAVGSSRAFEIMLSGRDVGAEEAEQIGLVSYRVSDDRLLDTCYSI 219          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: ECHH_RHIME (Probable enoyl-CoA hydratase OS=Rhizobium meliloti GN=fadB1 PE=3 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.156e-20
Identity = 73/215 (33.95%), Postives = 105/215 (48.84%), Query Frame = 1
Query:   40 SYKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEK 684
            SY+++ +E +    RV  + LNRP   NAL+     E   AL + D +  V AIVL+G+   F +G D+K +  +           F + +  D  FL      +   RKP+IA++ G  +GGG ++   CD    S+ A F   E+ L +   +G  QRL   VG   AM+L LTGR     EA+  GLVSRV      L++     A G AEK
Sbjct:    2 SYETLLVETQ---GRVGLITLNRPQALNALNAVLMRELDAALKAFDADRAVGAIVLAGSEKAFAAGADIKEMQGLD----------FVDGYLAD--FL-GGWEHVANARKPMIAAVSGFALGGGCELAMMCDFIIASETAKFGQPEITLGVIPGMGGSQRLTRAVGKAKAMDLILTGRMMDAAEAERSGLVSRVVAPDRLLEE-----ALGAAEK 195          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: ECHD2_HUMAN (Enoyl-CoA hydratase domain-containing protein 2, mitochondrial OS=Homo sapiens GN=ECHDC2 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.156e-20
Identity = 66/211 (31.28%), Postives = 103/211 (48.82%), Query Frame = 1
Query:   73 PNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELD---QGVRLVAEGIAEKSPL 693
            P+  +  + +NRPS RNAL   F +E  + L+ L ++  V  ++  SG    FC+G DLK    +++             F + +R L + + A      P IA++ G  +GGG+++  ACD+R  +  A   + E    +    G  QRLP  +G   A EL  TGRR  G EA  LGLV+     + E D   Q  R +A+ I  ++P+
Sbjct:   38 PDQGITEILMNRPSARNALGNVFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGADLKEREQMSEAEVGV--------FVQRLRGLMNDIAAFPA---PTIAAMDGFALGGGLELALACDLRVAASSAVMGLIETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLSGTEAHVLGLVNHAVAQNEEGDAAYQRARALAQEILPQAPI 237          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: CRT_CLOAB (3-hydroxybutyryl-CoA dehydratase OS=Clostridium acetobutylicum GN=crt PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.738e-20
Identity = 67/210 (31.90%), Postives = 105/210 (50.00%), Query Frame = 1
Query:   82 RVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDH-FCSGIDLKTLSSVTDHTTSTDRGRF-----SEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPL 693
            +V  + +NRP   NAL+ +   E    +  ++ +  V A++L+G G+  F +G D+  +  +     +T  GR      ++ FRR           +E   KPVIA+++G  +GGG +I  +CDIR  S +A F   EV L IT   G  QRL  +VG G A +L  T +     EA  +GLV++V   S EL    + +A  I   +P+
Sbjct:   13 KVAVVTINRPKALNALNSDTLKEMDYVIGEIENDSEVLAVILTGAGEKSFVAGADISEMKEM-----NTIEGRKFGILGNKVFRR-----------LELLEKPVIAAVNGFALGGGCEIAMSCDIRIASSNARFGQPEVGLGITPGFGGTQRLSRLVGMGMAKQLIFTAQNIKADEALRIGLVNKVVEPS-ELMNTAKEIANKIVSNAPV 205          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADJ_PHOLL (Fatty acid oxidation complex subunit alpha OS=Photorhabdus luminescens subsp. laumondii GN=fadJ PE=3 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 7.495e-20
Identity = 64/202 (31.68%), Postives = 98/202 (48.51%), Query Frame = 1
Query:  100 LNRPSQR-NALSREFFTEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPL 693
            +N P ++ N L  EF  +F        Q+  +  ++L SG  D F +G D+   S +    T  D    +EK        Q   + I     PV+A+IHGAC+GGG+++  AC  R CS+D      + EV L +    G  QRLP ++G  +A+++ LTG++    +A  LGLV         LD  +  V +GI  + PL
Sbjct:   36 INVPGEKVNTLKAEFVDQFLNVFKQAQQSSGLKGLILISGKPDTFIAGADI---SMIAGCKTKEDARDLAEKG-------QKLFSQIANYPLPVVAAIHGACLGGGLELALACHWRVCSQDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSSALDIMLTGKQLRAKQALRLGLVDDAVPLDILLDIAIEKVKKGIPVRKPL 227          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: AUHM_DICDI (Methylglutaconyl-CoA hydratase, mitochondrial OS=Dictyostelium discoideum GN=auh PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.848e-19
Identity = 68/228 (29.82%), Postives = 106/228 (46.49%), Query Frame = 1
Query:   13 FTSAKQMEESYKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDH-FCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPL 693
            FT+  Q E   +  ++EG+  N  +  +  NR   +NAL +    +F   L+ L   P+   +++    D  FCSG DLK  + ++    S           + +  L+ + T +E  + P IA+I G  +GGG ++V ACD R  SK +   + E  LAI    G  QRLP ++G   A EL  TG       A E+GLV          D+ +  +A+ I  K P+
Sbjct:   37 FTTETQQECILE--RLEGE--NKGISVISFNRGHVKNALGKNLMNQFRSHLNELRFCPDTRVVIVRSLVDGVFCSGADLKERALMSQVEAS-----------QFVHSLRSSFTELETLQMPTIAAIEGVAVGGGTEMVLACDFRVASKSSKMGLPETGLAIIPGAGGTQRLPRLIGIPRAKELIFTGAILDSKRALEIGLVQYETEKGEAFDKAIE-IAKQIIPKGPI 248          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: AUHM_MOUSE (Methylglutaconyl-CoA hydratase, mitochondrial OS=Mus musculus GN=Auh PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.720e-19
Identity = 65/195 (33.33%), Postives = 93/195 (47.69%), Query Frame = 1
Query:   76 NSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVR 657
            N  ++ L +NR   +NALS+       KA+ +L  +  V  I++ S     FC+G DLK  + +     S++ G F  K R         +  I     P IA+I G  +GGG+++  ACDIR  +  A   + E  LAI    G  QRLP  +G   A EL  + R   G EAK +GL+S V   + E D   R
Sbjct:   61 NRGIVVLGINRAYGKNALSKNLLKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMH----SSEVGPFVSKIR-------SVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGQEAKAVGLISHVLEQNQEGDAAYR 244          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: AUHM_HUMAN (Methylglutaconyl-CoA hydratase, mitochondrial OS=Homo sapiens GN=AUH PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.720e-19
Identity = 67/216 (31.02%), Postives = 104/216 (48.15%), Query Frame = 1
Query:   13 FTSAKQMEESYKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVR 657
            ++S  + E+  +   +E +  N  ++ L +NR   +N+LS+       KA+ +L  +  V  I++ S     FC+G DLK  + ++    S++ G F  K R         +  I     P IA+I G  +GGG+++  ACDIR  +  A   + E  LAI    G  QRLP  +G   A EL  + R   G EAK +GL+S V   + E D   R
Sbjct:   67 YSSEMKTEDELRVRHLEEE--NRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMS----SSEVGPFVSKIRA-------VINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYR 269          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADJ_SHESW (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain W3-18-1) GN=fadJ PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.286e-19
Identity = 60/194 (30.93%), Postives = 96/194 (49.48%), Query Frame = 1
Query:  121 NALSREFFTEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPL 693
            N L  +F  E  + L+ +  +P++  +VL SG  D F +G D+  L +     T+ D    S++              +E  + PV+A+IHGAC+GGG+++  AC  R CS D      V EV L +    G  QRLP +VG   A+++ LTG++    +A ++GLV+ V   +  L   V +   G     P+
Sbjct:   27 NTLKAQFGPEISEILAEIKSDPHIRGLVLISGKKDSFVAGADISMLDACK---TAGDAKALSQQGHV-------VFNELEALKIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRSKQALKMGLVNDVVPQTILLQTAVEMALTGKRAPKPV 210          
The following BLAST results are available for this feature:
BLAST of CN185648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 206
Match NameE-valueIdentityDescription
ECHD2_MOUSE5.190e-2132.32Enoyl-CoA hydratase domain-containing protein 2, m... [more]
ECH12_MYCLE6.779e-2131.98Probable enoyl-CoA hydratase echA12 OS=Mycobacteri... [more]
ECHH_RHIME1.156e-2033.95Probable enoyl-CoA hydratase OS=Rhizobium meliloti... [more]
ECHD2_HUMAN1.156e-2031.28Enoyl-CoA hydratase domain-containing protein 2, m... [more]
CRT_CLOAB5.738e-2031.903-hydroxybutyryl-CoA dehydratase OS=Clostridium ac... [more]
FADJ_PHOLL7.495e-2031.68Fatty acid oxidation complex subunit alpha OS=Phot... [more]
AUHM_DICDI2.848e-1929.82Methylglutaconyl-CoA hydratase, mitochondrial OS=D... [more]
AUHM_MOUSE3.720e-1933.33Methylglutaconyl-CoA hydratase, mitochondrial OS=M... [more]
AUHM_HUMAN3.720e-1931.02Methylglutaconyl-CoA hydratase, mitochondrial OS=H... [more]
FADJ_SHESW8.286e-1930.93Fatty acid oxidation complex subunit alpha OS=Shew... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001K16_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001K16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185648 ID=CN185648; Name=CN185648; organism=Citrus sinensis; type=EST; length=695bp
AGGCTTGCCTTTTTCACATCAGCCAAACAGATGGAAGAGAGTTACAAATC
GATAAAAATCGAGGGAAAAACTCCAAATTCTCGAGTCATTTATCTGTATC
TTAACCGTCCATCGCAACGCAACGCACTATCACGTGAATTCTTCACTGAA
TTCCCTAAGGCCTTATCTTCCCTCGACCAAAATCCTAACGTCAACGCCAT
CGTCCTCTCAGGCACCGGCGACCACTTCTGCTCCGGAATCGATCTGAAAA
CACTAAGTTCGGTCACCGACCATACCACTTCCACCGACCGCGGCCGCTTC
TCCGAGAAGTTCCGGCGAGATATCAGGTTCTTGCAGGATGCGGTAACTGC
CATCGAGCGATGTCGGAAGCCAGTCATCGCATCTATCCACGGGGCGTGTA
TCGGAGGCGGCGTCGATATTGTCACTGCCTGTGATATTCGGTTCTGTTCA
AAAGATGCTTTTTTTTCGGTCAAAGAGGTTGACTTGGCTATCACGGCAGA
TCTCGGGACTTTACAGAGGCTTCCGGCGATTGTCGGGTATGGTAACGCGA
TGGAATTGGCGTTGACGGGTCGTAGGTTTTGGGGTTTGGAGGCTAAGGAG
TTGGGTCTGGTTTCTCGGGTTTTCGGGACGAGTTATGAATTGGATCAGGG
TGTCAGGCTTGTTGCCGAGGGAATTGCTGAAAAATCTCCTCTTGC
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