CN185648
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: HIBCH_XENTR (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus tropicalis GN=hibch PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11 Identity = 52/176 (29.55%), Postives = 87/176 (49.43%), Query Frame = 1 Query: 100 LNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDH-FCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLG---TLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVS 615 LNRP NAL+ L +++P +++ G G FC+G D++ +VTD + DR ++ F R+ L +A+ +KP +A I G +GGGV + R S++ F++ E + + D+G L RLP +G + LALTG R G + ++ G+ + Sbjct: 50 LNRPKALNALNLGMIRLIYPQLGLWEEDPETYLVIIKGVGGKAFCAGGDIR---AVTDAGKAGDR--LAQDFFREEYILNNAIGTY---KKPYVALIDGITMGGGVGLSVHGHFRVASENTLFAMPETAIGLFPDVGGGYFLPRLPGKLG----LYLALTGFRLKGSDVQKAGIAT 213
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADB_VIBVU (Fatty acid oxidation complex subunit alpha OS=Vibrio vulnificus GN=fadB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11 Identity = 48/214 (22.43%), Postives = 88/214 (41.12%), Query Frame = 1 Query: 43 YKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEK 684 Y++ ++ K V + P+ N L KAL +L + + ++L+ + F G D+ + + E+ + ++F +E P +A + G +GGG + V A D+R K + E L I G RLP ++G +AME+ G+ EA ++GL+ V + ++ + + I EK Sbjct: 3 YQAETLQVKEVQDGVAEILFCAPNSVNKLDLATLASLDKALDALTAHSGLKGVMLTSDKEAFIVGADITEFLGLF--------AKPEEELDQWLQFANSIFNKLEDLPVPTVAVVKGHTLGGGCECVLATDLRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADSAMEIITQGKACRAEEALKIGLLDAVVDSDRLYASALQTLTDAINEK 208
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADB_VIBPA (Fatty acid oxidation complex subunit alpha OS=Vibrio parahaemolyticus GN=fadB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11 Identity = 50/214 (23.36%), Postives = 87/214 (40.65%), Query Frame = 1 Query: 43 YKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEK 684 Y++ ++ K + L P N L KAL +L + + ++L+ D F G D+ + T + + + ++F +E P I+ + G +GGG + V A D+R K + E L I G RLP ++G +AME+ G+ EA ++GL+ V T + ++ + I EK Sbjct: 3 YQADTLQVKEIQDGIAELSFCSPKSVNKLDLATLESLDKALDALTSHQGLKGLMLTSDKDAFIVGADITEFLGLFAKTDA--------ELDQWLQFANSIFNKLEDLPVPTISVLKGHTLGGGCECVLATDMRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADSAMEIITQGKACRADEALKIGLLDAVVETDALYESALQTLTSAINEK 208
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADB_SHELP (Fatty acid oxidation complex subunit alpha OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=fadB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11 Identity = 53/217 (24.42%), Postives = 87/217 (40.09%), Query Frame = 1 Query: 43 YKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDA---VTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEK 684 Y+S I+ + + L N N RE AL +L Q V ++L+ D F G D+ + + +G +L+DA +E P I++I G +GGG + + A D+R A + E L I G RLP ++G NA+E TG+ A ++G + V +++ + I+EK Sbjct: 3 YQSPTIQVELLEDNIARLCFNAEGSVNKFDRETLNSLNDALDALAQTQGVKGLMLTSGKDAFIVGADITEFLGLFAQDDNVLQG-----------WLEDANKVFNKLEDLPFPTISAIKGFALGGGCETILATDLRIADTSARIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQRPEAALKVGAIDAVVAPELLETAACQMLQDAISEK 208
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADB_PHOPR (Fatty acid oxidation complex subunit alpha OS=Photobacterium profundum GN=fadB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11 Identity = 49/197 (24.87%), Postives = 86/197 (43.65%), Query Frame = 1 Query: 94 LYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEK 684 L LN P N + +AL++L Q ++ ++++ D F G D+ + + +E+ + + D +E P +++I+G +GGG + V A D R A + E L I G RLP ++G +AME+ G+ +A +LGLV V + D + ++ + IA K Sbjct: 20 LNLNAPGAVNKFDLKTLECLNEALNALYQQSDLKGLLITSDKDAFIVGADITEFLGLF--------AKPAEELSQWLTRANDIFNKLEDLPVPTLSAINGHALGGGCECVLATDFRLADITARIGLPETRLGIMPGFGGTVRLPRLLGADSAMEIITAGKDKKAQDALKLGLVDAVVAPTALKDAALSMIKDAIAGK 208
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: ECHH_RHOCA (Probable enoyl-CoA hydratase OS=Rhodobacter capsulatus GN=fadB1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11 Identity = 54/191 (28.27%), Postives = 85/191 (44.50%), Query Frame = 1 Query: 40 SYKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLV 612 SY +I+ E + + + L+RP NAL+ E AL AIVL+G+G FCSG DL ++ + + R + + + AI C PV+A+++GA G G ++ A D+ ++ A F + + D G LP VG AM +AL + EA +GL+ Sbjct: 2 SYHTIRYE---ISEGLAVITLDRPEVMNALNAAMRHELTAALHRA--RGEARAIVLTGSGRAFCSGQDLGDGAAEGLNLETVLREEY-----------EPLLQAIYSCPLPVLAAVNGAAAGAGANLALAADVVIAAQSAAFMQAFTRIGLMPDAGGTWWLPRQVGMARAMGMALFAEKIGAEEAARMGLI 176 The following BLAST results are available for this feature:
BLAST of CN185648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 206
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185648 ID=CN185648; Name=CN185648; organism=Citrus sinensis; type=EST; length=695bpback to top |