CN185648

Overview
NameCN185648
Unique NameCN185648
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length695
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2495 contig Csv1_Contig2495:1..695. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADJ_ECO55 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli (strain 55989 / EAEC) GN=fadJ PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.563e-17
Identity = 58/194 (29.90%), Postives = 92/194 (47.42%), Query Frame = 1
Query:  121 NALSREFFTEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPL 693
            N L  EF ++    +  L +N  +  +V +S   D+F +G D+  + +      +    R  ++   +I  L            PVIA+IHGAC+GGG+++  AC  R C+ D      + EV L +    G  QRLP ++G   A+E+ LTG++    +A +LGLV  V   S  L+  V L  +      PL
Sbjct:   29 NTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPI----------PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEVAVELAKKDRPSSRPL 212          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADJ_ECO24 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=fadJ PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.563e-17
Identity = 58/194 (29.90%), Postives = 92/194 (47.42%), Query Frame = 1
Query:  121 NALSREFFTEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPL 693
            N L  EF ++    +  L +N  +  +V +S   D+F +G D+  + +      +    R  ++   +I  L            PVIA+IHGAC+GGG+++  AC  R C+ D      + EV L +    G  QRLP ++G   A+E+ LTG++    +A +LGLV  V   S  L+  V L  +      PL
Sbjct:   29 NTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPI----------PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEVAVELAKKDRPSSRPL 212          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADJ_SHIDS (Fatty acid oxidation complex subunit alpha OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=fadJ PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.041e-17
Identity = 58/194 (29.90%), Postives = 92/194 (47.42%), Query Frame = 1
Query:  121 NALSREFFTEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPL 693
            N L  EF ++    +  L +N  +  +V +S   D+F +G D+  + +      +    R  ++   +I  L            PVIA+IHGAC+GGG+++  AC  R C+ D     S+ EV L +       QRLP ++G   A+E+ LTG++    +A +LGLV  V   S  L+  V L  +      PL
Sbjct:   29 NTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQDQQLMAEIHALPI----------PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLSLPEVQLGLLPGSDGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEAAVELAKQDRPSSRPL 212          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADJ_SHEB8 (Fatty acid oxidation complex subunit alpha OS=Shewanella baltica (strain OS185) GN=fadJ PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.041e-17
Identity = 59/194 (30.41%), Postives = 94/194 (48.45%), Query Frame = 1
Query:  121 NALSREFFTEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPL 693
            N L  +F  E  + L+ +  + ++  +VL SG  D F +G D+  L +     T+ D    S++              +E    PV+A+IHGAC+GGG+++  AC  R CS D      V EV L +    G  QRLP +VG   A+++ LTG++    +A ++GLV+ V   +  L   V +   G     P+
Sbjct:   27 NTLKAQFGPEISEILAEIKSDSSIRGLVLISGKKDSFVAGADISMLDACK---TAGDAKALSQQGHV-------VFNELEALTIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKKIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKRAPKPV 210          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADJ_ECOUT (Fatty acid oxidation complex subunit alpha OS=Escherichia coli (strain UTI89 / UPEC) GN=fadJ PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.041e-17
Identity = 57/194 (29.38%), Postives = 92/194 (47.42%), Query Frame = 1
Query:  121 NALSREFFTEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPL 693
            N L  EF ++    +  + +N  +  +V +S   D+F +G D+  + +      +    R  ++   +I  L            PVIA+IHGAC+GGG+++  AC  R C+ D      + EV L +    G  QRLP ++G   A+E+ LTG++    +A +LGLV  V   S  L+  V L  +      PL
Sbjct:   29 NTLKAEFASQVRAIIKQIRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEVLARQGQQLMAEIHALPI----------PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVDDVVPHSILLEAAVELAKQDRPSSRPL 212          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADJ_ECOK1 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O1:K1 / APEC GN=fadJ PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.041e-17
Identity = 57/194 (29.38%), Postives = 92/194 (47.42%), Query Frame = 1
Query:  121 NALSREFFTEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPL 693
            N L  EF ++    +  + +N  +  +V +S   D+F +G D+  + +      +    R  ++   +I  L            PVIA+IHGAC+GGG+++  AC  R C+ D      + EV L +    G  QRLP ++G   A+E+ LTG++    +A +LGLV  V   S  L+  V L  +      PL
Sbjct:   29 NTLKAEFASQVRAIIKQIRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEVLARQGQQLMAEIHALPI----------PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVDDVVPHSILLEAAVELAKQDRPSSRPL 212          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADJ_ECO45 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=fadJ PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.041e-17
Identity = 57/194 (29.38%), Postives = 92/194 (47.42%), Query Frame = 1
Query:  121 NALSREFFTEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPL 693
            N L  EF ++    +  + +N  +  +V +S   D+F +G D+  + +      +    R  ++   +I  L            PVIA+IHGAC+GGG+++  AC  R C+ D      + EV L +    G  QRLP ++G   A+E+ LTG++    +A +LGLV  V   S  L+  V L  +      PL
Sbjct:   29 NTLKAEFASQVRAIIKQIRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEVLARQGQQLMAEIHALPI----------PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVDDVVPHSILLEAAVELAKQDRPSSRPL 212          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADJ_ECO27 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=fadJ PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.041e-17
Identity = 57/194 (29.38%), Postives = 92/194 (47.42%), Query Frame = 1
Query:  121 NALSREFFTEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPL 693
            N L  EF ++    +  + +N  +  +V +S   D+F +G D+  + +      +    R  ++   +I  L            PVIA+IHGAC+GGG+++  AC  R C+ D      + EV L +    G  QRLP ++G   A+E+ LTG++    +A +LGLV  V   S  L+  V L  +      PL
Sbjct:   29 NTLKAEFASQVRAIIKQIRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEVLARQGQQLMAEIHALPI----------PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVDDVVPHSILLEAAVELAKQDRPSSRPL 212          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADJ_SHEB5 (Fatty acid oxidation complex subunit alpha OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=fadJ PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.666e-17
Identity = 59/194 (30.41%), Postives = 94/194 (48.45%), Query Frame = 1
Query:  121 NALSREFFTEFPKALSSLDQNPNVNAIVL-SGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEGIAEKSPL 693
            N L  +F  E  + L+ +  + ++  +VL SG  D F +G D+  L +     T+ D    S++              +E    PV+A+IHGAC+GGG+++  AC  R CS D      V EV L +    G  QRLP +VG   A+++ LTG++    +A ++GLV+ V   +  L   V +   G     P+
Sbjct:   27 NTLKAQFGPEISEILADIKSDSSIRGLVLISGKKDSFVAGADISMLDACK---TAGDAKALSQQGHV-------VFNELEALTIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKRAPKPV 210          
BLAST of CN185648 vs. ExPASy Swiss-Prot
Match: FADJ_KLEP7 (Fatty acid oxidation complex subunit alpha OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=fadJ PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.666e-17
Identity = 60/216 (27.78%), Postives = 106/216 (49.07%), Query Frame = 1
Query:   37 ESYKSIKIEGKTPNSRVIYLYLNRPSQR-NALSREFFTEFPKALSSLDQNPNVNAIV-LSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKD--AFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVRLVAEG 672
            ++  + K+E +    ++  + ++ P ++ N L  EF ++    +  L  + +V  +V +S   D+F +G D+  ++          R R +++     R  Q  +  I     PVIA+IHGAC+GGG+++  AC  R CS D      + EV L +    G  QRLP ++G   A+++ LTG++    +A + GLV  V   +  L   V L  +G
Sbjct:    2 DTVSAFKLEVRA--DKIAVITIDAPGEKMNTLKAEFGSQVRGLIRQLRDDKSVRGVVFISAKADNFIAGADINMIA----------RCRSAQEAEALARQGQQIMAEIHGLSIPVIAAIHGACLGGGLELALACHGRICSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGKQLRPRQALKAGLVDEVVPQAILLQAAVELALKG 205          
The following BLAST results are available for this feature:
BLAST of CN185648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 206
Match NameE-valueIdentityDescription
FADJ_ECO551.563e-1729.90Fatty acid oxidation complex subunit alpha OS=Esch... [more]
FADJ_ECO241.563e-1729.90Fatty acid oxidation complex subunit alpha OS=Esch... [more]
FADJ_SHIDS2.041e-1729.90Fatty acid oxidation complex subunit alpha OS=Shig... [more]
FADJ_SHEB82.041e-1730.41Fatty acid oxidation complex subunit alpha OS=Shew... [more]
FADJ_ECOUT2.041e-1729.38Fatty acid oxidation complex subunit alpha OS=Esch... [more]
FADJ_ECOK12.041e-1729.38Fatty acid oxidation complex subunit alpha OS=Esch... [more]
FADJ_ECO452.041e-1729.38Fatty acid oxidation complex subunit alpha OS=Esch... [more]
FADJ_ECO272.041e-1729.38Fatty acid oxidation complex subunit alpha OS=Esch... [more]
FADJ_SHEB52.666e-1730.41Fatty acid oxidation complex subunit alpha OS=Shew... [more]
FADJ_KLEP72.666e-1727.78Fatty acid oxidation complex subunit alpha OS=Kleb... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001K16_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001K16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185648 ID=CN185648; Name=CN185648; organism=Citrus sinensis; type=EST; length=695bp
AGGCTTGCCTTTTTCACATCAGCCAAACAGATGGAAGAGAGTTACAAATC
GATAAAAATCGAGGGAAAAACTCCAAATTCTCGAGTCATTTATCTGTATC
TTAACCGTCCATCGCAACGCAACGCACTATCACGTGAATTCTTCACTGAA
TTCCCTAAGGCCTTATCTTCCCTCGACCAAAATCCTAACGTCAACGCCAT
CGTCCTCTCAGGCACCGGCGACCACTTCTGCTCCGGAATCGATCTGAAAA
CACTAAGTTCGGTCACCGACCATACCACTTCCACCGACCGCGGCCGCTTC
TCCGAGAAGTTCCGGCGAGATATCAGGTTCTTGCAGGATGCGGTAACTGC
CATCGAGCGATGTCGGAAGCCAGTCATCGCATCTATCCACGGGGCGTGTA
TCGGAGGCGGCGTCGATATTGTCACTGCCTGTGATATTCGGTTCTGTTCA
AAAGATGCTTTTTTTTCGGTCAAAGAGGTTGACTTGGCTATCACGGCAGA
TCTCGGGACTTTACAGAGGCTTCCGGCGATTGTCGGGTATGGTAACGCGA
TGGAATTGGCGTTGACGGGTCGTAGGTTTTGGGGTTTGGAGGCTAAGGAG
TTGGGTCTGGTTTCTCGGGTTTTCGGGACGAGTTATGAATTGGATCAGGG
TGTCAGGCTTGTTGCCGAGGGAATTGCTGAAAAATCTCCTCTTGC
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