CN185645
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_THEAQ (Superoxide dismutase [Mn] OS=Thermus aquaticus GN=sodA PE=3 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 4.247e-22 Identity = 66/209 (31.58%), Postives = 92/209 (44.02%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVI-ASYNKGDLLPAF-NNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWE 738 F+L YP ALEPH+ T+E H KHH AYV NLN + G +E ++ + D+ A NN NH FW I+ FG +FGSGWAWLV + L V+ T N NP++ ++ ++ IDVWEHAYYL +QNRR DY+ + +++W+ Sbjct: 5 FKLPELGYPYEALEPHIDARTMEIHHQKHHGAYVTNLNAALEKYPYLQGAEVETLLRHLTALPADIQAAVRNNGGGHLNHSLFWRLLTPGGAKEPVGELKKAIDEQFGGFAALKEKLTQAAMGRFGSGWAWLV-----------------KDPFGKLHVISTANQDNPVMGGFAPIVGIDVWEHAYYLKYQNRRADYLQAIWN-VLNWD 195
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM2_BACCR (Superoxide dismutase [Mn] 2 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=sodA2 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.244e-22 Identity = 65/216 (30.09%), Postives = 98/216 (45.37%), Query Frame = 1 Query: 112 AKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 + F+L Y + LEPH+ +TL H GKHH YV+NLN + KSLE+++ + + K + NN + H FW +I+ F + ++FGSG+ WLV + L V+ TPN PL LL IDVWEHAYYL +QNRRP++++ + V+W+ V+++ Sbjct: 2 SSFQLPKLSYDYDELEPHIDSNTLSIHHGKHHATYVNNLNATLENYTELHNKSLEELLCNLDTLPKEIVTAVRNNGGGHYCHSLFWEVMSPRGGGEPNGDVAKVIDYYFNTFDNLKDQLSKAAISRFGSGYGWLVLDG------------------EELSVMSTPNQDTPLQEGKIPLLVIDVWEHAYYLKYQNRRPEFVTNWW-HTVNWDQVNEK 198
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM2_BACAN (Superoxide dismutase [Mn] 2 OS=Bacillus anthracis GN=sodA2 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.753e-21 Identity = 64/216 (29.63%), Postives = 98/216 (45.37%), Query Frame = 1 Query: 112 AKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 + F+L Y + LEP++ +TL H GKHH YV+NLN + KSLE+++ + + K + NN + H FW +I+ F + ++FGSG+ WLV + L V+ TPN PL LL IDVWEHAYYL +QNRRP++++ + V+W+ V+++ Sbjct: 2 SSFQLPKLSYDYDELEPYIDSNTLSIHHGKHHATYVNNLNAALENYSELHNKSLEELLCNLETLPKEIVTAVRNNGGGHYCHSLFWEVMSPRGGGEPNGDVAKVIDYYFNTFDNLKDQLSKAAISRFGSGYGWLVLDG------------------EELSVMSTPNQDTPLQEGKIPLLVIDVWEHAYYLKYQNRRPEFVTNWW-HTVNWDRVNEK 198
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM1_PLEBO (Superoxide dismutase [Mn] 1 OS=Plectonema boryanum GN=sodA1 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.595e-21 Identity = 66/222 (29.73%), Postives = 105/222 (47.30%), Query Frame = 1 Query: 103 QISAK-FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSS--LLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 Q+SA +L P PY ALEP++ T+ H KHH YV+N+N+ + +S++ ++ + + NN NH FW I++ FGS +FGSGWAWLV S++ L + T N NPL+ + ++ +L DVWEHAYYL +QNRR +Y++ + + +V+W++V++R Sbjct: 38 QLSASPAKLDPLPYDYAALEPYIDAQTMRLHHDKHHATYVNNINETLKAYPDLQKQSVDSLIQNLNQVPEAIRTKIRNNGGGHVNHTMFWQIMAPKAGGTPTGAVAKAIDQTFGSFDAFKQQFNKAGADRFGSGWAWLV-----------------SDRQGKLSITSTANQDNPLMSNPNAYPILGNDVWEHAYYLKYQNRRAEYLTNWWN-VVNWQAVNQR 241
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_KLEPL (Superoxide dismutase [Fe] (Fragment) OS=Klebsiella planticola GN=sodA PE=1 SV=3) HSP 1 Score: 101.293 bits (251), Expect = 6.132e-21 Identity = 64/191 (33.51%), Postives = 81/191 (42.41%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPA------FNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYY 672 +EL PY +ALEPH+ T E H KHH YV NLN + GTE D K + D++ D LPA NN NH FW I+ FGS T+FGSGWAWL+ S+ V TPN +P++ + +L +DVWEHAYY Sbjct: 3 YELPQLPYAYDALEPHIDAKTXEIHHSKHHNTYVTNLNAAVEGTEFAD-KDINDLIAML----DALPADKQTAVRNNGGGHANHTLFWEVIAPGGSNTPVGEVAKAIDAKFGSFDAFKEEFAKAATTRFGSGWAWLIV------------------DGDSVAVTSTPNQDSPVMEGKTPVLGLDVWEHAYY 170
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_BUCAI (Superoxide dismutase [Mn] OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=sodA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 8.009e-21 Identity = 69/217 (31.80%), Postives = 96/217 (44.24%), Query Frame = 1 Query: 136 PYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIAS---YNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSS------LLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 PY NALEP ++T++ H KHH+ Y++N N + T E + I + K + L NNA NH FFW IE+ FG+ FGSGW WLV ++ L +V T N +PL+ S ++ +D+WEHAYYL +QNRR DYI F + +V+WE S RL+ Sbjct: 9 PYSYNALEPFFDEETMKIHHTKHHQNYINNTNSILENTTFSSLPIEELISILNEIILEKKNALR--NNAGGHINHSFFWKSLKSGTVLTNDLKIE--IEKQFGTIDEFKEKFESVALNHFGSGWVWLV------------------NQNGVLSIVSTVNQDSPLMGKLISNTYGYPIIGLDIWEHAYYLKYQNRRLDYIKSFWN-VVNWEEASNRLQ 202
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_BORBU (Superoxide dismutase [Fe] OS=Borrelia burgdorferi GN=sod PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.046e-20 Identity = 71/216 (32.87%), Postives = 92/216 (42.59%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAF-----NNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSK 750 F+L Y +A+EP++ T+E H KHH +V NLN + E L DV N D F NNA NH ++ I FGS FGSGWAWLV + L V+ PN +PL+ Y +L IDVWEHAYYL +QNRR +Y+ F+ K ++WE VSK Sbjct: 2 FKLPELGYDYDAVEPYIDAKTMEIHHSKHHNGFVMNLNSIL---EKMGKIHLTDVSNILKNIHDFPEEFQTLIRNNAGGYSNHTLYFRTLRPGNKDNLFEKFKDDINAAFGSLDVLKANLKDTAMKIFGSGWAWLVLCP-----------------ESGLKVISMPNQDSPLMNSYKPILGIDVWEHAYYLKYQNRRIEYVDAFL-KALNWEEVSK 196
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_STRMU (Superoxide dismutase [Mn/Fe] OS=Streptococcus mutans GN=sodA PE=1 SV=3) HSP 1 Score: 99.3673 bits (246), Expect = 2.330e-20 Identity = 65/212 (30.66%), Postives = 96/212 (45.28%), Query Frame = 1 Query: 136 PYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVG-TELGDGKSLEDVVIASYNKGDLLPA------FNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSK 750 PY +ALEP++ +T+ H KHH YV N N + E+G+ +V++A + +PA NN NH FW + E FGS T+FGSGWAWLV +K+ L V T N P+ +L +DVWEHAYYL+++N RP+YI F + +++W +V++ Sbjct: 9 PYAYDALEPYIDAETMTLHHDKHHATYVANANAALEKHPEIGENL---EVLLADVEQ---IPADIRQSLINNGGGHLNHALFWELLSPEKTKVTAEVAAAINEA-FGSFDDFKAAFTAAATTRFGSGWAWLVV-----------------DKEGKLEVTSTANQDTPISQGLKPILALDVWEHAYYLNYRNVRPNYIKAFFE-VINWNTVAR 195
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM3_PLEBO (Superoxide dismutase [Mn] 3 (Fragment) OS=Plectonema boryanum GN=sodA3 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.975e-20 Identity = 64/220 (29.09%), Postives = 97/220 (44.09%), Query Frame = 1 Query: 121 ELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKG-DLLPAF------NNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 +L P PY AL + +T+ H +HH+ YVDNLN T L D +L+++ I + + + +P NNA NH FW I + FG+ +FGSGW WLV L +V T N NP++ ++ DVWEHAYYL +QNRR DY++ + + +V+W +++R + Sbjct: 34 QLPPLPYDAGALSKAIDAETMRIHHDRHHQTYVDNLN-----TALKDQPNLQNLSIEAMLRDLNAVPENIRNTIRNNAGGHLNHTIFWQIMSPDGGGQPTGAIAQAINQTFGNFESFRKQFNEAGGDRFGSGWVWLV-----------------RNAQGQLQIVSTANQDNPIMEGNYPIMGNDVWEHAYYLRYQNRRADYLNNWWN-VVNWNEINRRFQ 230
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODF_METTH (Superoxide dismutase [Fe] OS=Methanobacterium thermoautotrophicum GN=sod PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.975e-20 Identity = 68/217 (31.34%), Postives = 99/217 (45.62%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLE-DVVIASYNKGDLLPAFNNAAQAWNHDFFW--XXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 +EL PYP +ALEPH+S++ L H KHH+AYVD N + +L + + + DV I K L + H FFW IE+DFGS + GSGWA L Y ++ L +++ ++ + LL +DVWEHAYY+D++N RPDY+ F + +V+W+ V KR E Sbjct: 9 YELPELPYPYDALEPHISREQLTIHHQKHHQAYVDGANALL--RKLDEARESDTDVDI----KAALKELSFHVGGYVLHLFFWGNMGPADECGGEPSGKLAEYIEKDFGSFERFRKEFSQAAISAEGSGWAVLTY----------------CQRTDRLFIMQVEKHNVNVIPHFRILLVLDVWEHAYYIDYRNVRPDYVEAFWN-IVNWKEVEKRFE 202 The following BLAST results are available for this feature:
BLAST of CN185645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 180
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185645 ID=CN185645; Name=CN185645; organism=Citrus sinensis; type=EST; length=763bpback to top |