CN185645
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_BORPE (Superoxide dismutase [Mn] OS=Bordetella pertussis GN=sodA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.191e-20 Identity = 63/209 (30.14%), Postives = 92/209 (44.02%), Query Frame = 1 Query: 139 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 Y +ALEPH+ T+E H +HH+ YV+ LN + G L + +E ++ I + G N+ NH W I+ G +FGSGWAWL P+ + L V + N +PL+ + +L +DVWEHAYYL +QNRRP+YI F ++V W V++R E Sbjct: 10 YAYDALEPHIDARTMEIHHTRHHQTYVNGLNAALEGAGLDSEEPVEQLLRRIPALPPGIHGAVRNHGGGHANHSLLWTVMSPSGGGRPDGRLAADIQAQLGGHDAFQAAFTQAALGRFGSGWAWLTVT--------------PAGR---LRVDSSANQDSPLMEGNTPILGLDVWEHAYYLQYQNRRPEYIEAFY-RVVDWAEVARRYE 200
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_STRR6 (Superoxide dismutase [Mn] OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=sodA PE=3 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 8.855e-20 Identity = 62/206 (30.10%), Postives = 86/206 (41.75%), Query Frame = 1 Query: 136 PYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVG-TELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSK 750 PY +ALEP++ +T+ H KHH+ YV+N N + E+G+ + S NN NH FW I+ FGS T+FGSGWAWLV K+ L V T N P+ +L +DVWEHAYY+ ++N RPDYI F +++W V + Sbjct: 9 PYAYDALEPYIDAETMHLHHDKHHQTYVNNANAALEKHPEIGEDLEALLADVESIPADIRQALINNGGGHLNHALFWELMTPEKTAPSAELAAA-IDATFGSFEEFQAAFTAAATTRFGSGWAWLVVN-----------------KEGKLEVTSTANQDTPISEGKKPILGLDVWEHAYYVKYRNVRPDYIKAFF-SVINWNKVDE 195
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_STRPN (Superoxide dismutase [Mn] OS=Streptococcus pneumoniae GN=sodA PE=3 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 8.855e-20 Identity = 62/206 (30.10%), Postives = 86/206 (41.75%), Query Frame = 1 Query: 136 PYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVG-TELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSK 750 PY +ALEP++ +T+ H KHH+ YV+N N + E+G+ + S NN NH FW I+ FGS T+FGSGWAWLV K+ L V T N P+ +L +DVWEHAYY+ ++N RPDYI F +++W V + Sbjct: 9 PYAYDALEPYIDAETMHLHHDKHHQTYVNNANAALEKHPEIGEDLEALLADVESIPADIRQALINNGGGHLNHALFWELMTPEKTAPSAELAAA-IDATFGSFEEFQAAFTAAATTRFGSGWAWLVVN-----------------KEGKLEVTSTANQDTPISEGKKPILGLDVWEHAYYVKYRNVRPDYIKAFF-SVINWNKVDE 195
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_BUCBP (Superoxide dismutase [Mn] OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=sodA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.156e-19 Identity = 65/217 (29.95%), Postives = 100/217 (46.08%), Query Frame = 1 Query: 136 PYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV-----IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSS------LLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 PY N+LEP + T+ H +HH+AY++N N + GT + +E+++ ++ NK L NNA NH FW ++E++F S + FGSGW WL+ K D +L +V T N PL+ S +L +D+WEHAYYL ++N R DY++ F + +V+W+ VS R Sbjct: 9 PYSYNSLEPFFDEKTMIIHHTRHHQAYINNTNSILNGTHY-ENLLIEELISKLNILSIENK---LALQNNAGGHINHSLFWKWLKLNTILKDDFKI--ILEKNFKSVDFFKKQFEKIALSHFGSGWIWLIKKY-----------------DNTLRIVTTVNQNTPLMGKEISGISGIPILGLDLWEHAYYLKYKNNRSDYVNAFWN-VVNWDEVSYR 201
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_BUCAP (Superoxide dismutase [Mn] OS=Buchnera aphidicola subsp. Schizaphis graminum GN=sodA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.973e-19 Identity = 70/224 (31.25%), Postives = 97/224 (43.30%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV-----IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSS------LLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 756 + L Y NALEP ++T+ H KHH+ Y++N N + T S+E+++ I+ NK L NNA NH FW I + FGS FGSGW WLV ++ L +V T N NPL+ S + +D+WEHAYYL +QNRR DYI F + +V+W+ S+RL Sbjct: 3 YSLPDLSYAYNALEPFFDEETMRIHHTKHHQNYINNTNSILERTNFSS-LSIEELMSIFNEISLENKNVLR---NNAGGHINHSLFWKGLKIGTILQGDLKSE--INKQFGSVEYFKSKFEDIALNHFGSGWIWLV------------------NQNGILSIVSTINQDNPLMGKSISGTHGNPIFGLDLWEHAYYLKYQNRRLDYIKSFWN-VVNWDEASRRL 201
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_STRP8 (Superoxide dismutase [Mn] OS=Streptococcus pyogenes serotype M18 GN=sodA PE=3 SV=3) HSP 1 Score: 95.1301 bits (235), Expect = 4.395e-19 Identity = 66/209 (31.58%), Postives = 94/209 (44.98%), Query Frame = 1 Query: 136 PYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVG-TELGDGKSLEDVVIASYNK--GDLLPAF-NNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSK 750 PY +ALEP +T+ H KHH YV N N + E+G+ +LE++ +A K D+ A NN NH FW I+ FGS +FGSGWAWLV K+ L + T N P+ +L +DVWEHAYYL+++N RP+YI F + +++W+ VS+ Sbjct: 9 PYAYDALEPQFDAETMSLHHDKHHATYVANTNAALEKHPEIGE--NLEEL-LADVTKIPEDIRQALINNGGGHLNHALFWELLSPEKQDVTPDVAQA-IDDAFGSFDAFKEQFTAAATGRFGSGWAWLVVN-----------------KEGQLEITSTANQDTPISEGKKPILALDVWEHAYYLNYRNVRPNYIKAFFE-IINWKKVSE 195
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_STRAG (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae GN=sodA PE=3 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 4.395e-19 Identity = 60/206 (29.13%), Postives = 87/206 (42.23%), Query Frame = 1 Query: 136 PYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVG-TELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSK 750 PY +ALEPH+ +T+ H KHH YV N N + E+G+ ++ + NN NH FW I FGS +FGSGWAWLV + L V+ T N P++ +L +DVWEHAYYL+++N RP+YI F + +++W V++ Sbjct: 9 PYAYDALEPHIDAETMTLHHDKHHATYVANANAALEKHPEIGEDLEALLADVSQIPEDIRQAVINNGGGHLNHALFWELMSPEETQISQELSED-INATFGSFEDFKAAFTAAATGRFGSGWAWLVVNA-----------------EGKLEVLSTANQDTPIMEGKKPILGLDVWEHAYYLNYRNVRPNYIKAFFE-IINWNKVNE 195
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_STRA5 (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae serotype V GN=sodA PE=3 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 4.395e-19 Identity = 60/206 (29.13%), Postives = 87/206 (42.23%), Query Frame = 1 Query: 136 PYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVG-TELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSK 750 PY +ALEPH+ +T+ H KHH YV N N + E+G+ ++ + NN NH FW I FGS +FGSGWAWLV + L V+ T N P++ +L +DVWEHAYYL+++N RP+YI F + +++W V++ Sbjct: 9 PYAYDALEPHIDAETMTLHHDKHHATYVANANAALEKHPEIGEDLEALLADVSQIPEDIRQAVINNGGGHLNHALFWELMSPEETQISQELSED-INATFGSFEDFKAAFTAAATGRFGSGWAWLVVNA-----------------EGKLEVLSTANQDTPIMEGKKPILGLDVWEHAYYLNYRNVRPNYIKAFFE-IINWNKVNE 195
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_STRA3 (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae serotype III GN=sodA PE=3 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 4.395e-19 Identity = 60/206 (29.13%), Postives = 87/206 (42.23%), Query Frame = 1 Query: 136 PYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVG-TELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSK 750 PY +ALEPH+ +T+ H KHH YV N N + E+G+ ++ + NN NH FW I FGS +FGSGWAWLV + L V+ T N P++ +L +DVWEHAYYL+++N RP+YI F + +++W V++ Sbjct: 9 PYAYDALEPHIDAETMTLHHDKHHATYVANANAALEKHPEIGEDLEALLADVSQIPEDIRQAVINNGGGHLNHALFWELMSPEETQISQELSED-INATFGSFEDFKAAFTAAATGRFGSGWAWLVVNA-----------------EGKLEVLSTANQDTPIMEGKKPILGLDVWEHAYYLNYRNVRPNYIKAFFE-IINWNKVNE 195
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_MOUSE (Superoxide dismutase [Mn], mitochondrial OS=Mus musculus GN=Sod2 PE=1 SV=3) HSP 1 Score: 95.1301 bits (235), Expect = 4.395e-19 Identity = 68/222 (30.63%), Postives = 93/222 (41.89%), Query Frame = 1 Query: 115 KFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGD------LLPAFN-NAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPL--VWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 K L PY ALEPH++ ++ H KHH AYV+NLN + E+ + KGD L PA N NH FW I+RDFGS GSGW WL + K++ L + + +PL LL IDVWEHAYYL ++N RPDY+ + +++WE+V++R Sbjct: 25 KHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLN------------ATEEKYHEALAKGDVTTQVALQPALKFNGGGHINHTIFWTNLSPKGGGEPKGELLEAIKRDFGSFEKFKEKLTAVSVGVQGSGWGWLGF-----------------NKEQGRLQIAACSNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWN-VINWENVTER 216 The following BLAST results are available for this feature:
BLAST of CN185645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 180
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185645 ID=CN185645; Name=CN185645; organism=Citrus sinensis; type=EST; length=763bpback to top |