CN185645
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_MACFA (Superoxide dismutase [Mn], mitochondrial OS=Macaca fascicularis GN=SOD2 PE=2 SV=3) HSP 1 Score: 93.9745 bits (232), Expect = 9.790e-19 Identity = 69/222 (31.08%), Postives = 93/222 (41.89%), Query Frame = 1 Query: 115 KFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGD------LLPAFN-NAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPL--VWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 K L PY ALEPH++ ++ H KHH AYV+NLN E+ + KGD L PA N NH FW I+RDFGS GSGW WL + +++ L + PN +PL LL IDVWEHAYYL ++N RPDY+ + +++WE+V++R Sbjct: 25 KHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLN------------VTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFEKFKEKLTAASVGVQGSGWGWLGF----------------NKERGQLQIAACPNQ-DPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWN-VINWENVTER 216
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_PONPY (Superoxide dismutase [Mn], mitochondrial OS=Pongo pygmaeus GN=SOD2 PE=2 SV=3) HSP 1 Score: 93.5893 bits (231), Expect = 1.279e-18 Identity = 69/222 (31.08%), Postives = 93/222 (41.89%), Query Frame = 1 Query: 115 KFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGD------LLPAFN-NAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPL--VWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 K L PY ALEPH++ ++ H KHH AYV+NLN E+ + KGD L PA N NH FW I+RDFGS GSGW WL + +++ L + PN +PL LL IDVWEHAYYL ++N RPDY+ + +++WE+V++R Sbjct: 25 KHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLN------------VTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGF----------------NKERGHLQIAACPNQ-DPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWN-VINWENVTER 216
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_PANTR (Superoxide dismutase [Mn], mitochondrial OS=Pan troglodytes GN=SOD2 PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.279e-18 Identity = 69/222 (31.08%), Postives = 93/222 (41.89%), Query Frame = 1 Query: 115 KFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGD------LLPAFN-NAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPL--VWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 K L PY ALEPH++ ++ H KHH AYV+NLN E+ + KGD L PA N NH FW I+RDFGS GSGW WL + +++ L + PN +PL LL IDVWEHAYYL ++N RPDY+ + +++WE+V++R Sbjct: 1 KHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLN------------VTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGF----------------NKERGHLQIAACPNQ-DPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWN-VINWENVTER 192
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_HYLLA (Superoxide dismutase [Mn], mitochondrial OS=Hylobates lar GN=SOD2 PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.279e-18 Identity = 69/222 (31.08%), Postives = 93/222 (41.89%), Query Frame = 1 Query: 115 KFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGD------LLPAFN-NAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPL--VWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 K L PY ALEPH++ ++ H KHH AYV+NLN E+ + KGD L PA N NH FW I+RDFGS GSGW WL + +++ L + PN +PL LL IDVWEHAYYL ++N RPDY+ + +++WE+V++R Sbjct: 1 KHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLN------------VTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTATSVGVQGSGWGWLGF----------------NKERGHLQIAACPNQ-DPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWN-VINWENVTER 192
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_HUMAN (Superoxide dismutase [Mn], mitochondrial OS=Homo sapiens GN=SOD2 PE=1 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.279e-18 Identity = 69/222 (31.08%), Postives = 93/222 (41.89%), Query Frame = 1 Query: 115 KFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGD------LLPAFN-NAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPL--VWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 K L PY ALEPH++ ++ H KHH AYV+NLN E+ + KGD L PA N NH FW I+RDFGS GSGW WL + +++ L + PN +PL LL IDVWEHAYYL ++N RPDY+ + +++WE+V++R Sbjct: 25 KHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLN------------VTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGF----------------NKERGHLQIAACPNQ-DPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWN-VINWENVTER 216
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_DICDI (Superoxide dismutase [Mn], mitochondrial OS=Dictyostelium discoideum GN=sod2 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.279e-18 Identity = 70/225 (31.11%), Postives = 96/225 (42.67%), Query Frame = 1 Query: 100 GQISAKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXL---IERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPL-VWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLET 762 G S + L PY AL P +S + + H KHH+ YV+NLN I +L S +DV + + FN NH FW L I + +GS GSGW WL Y +K LV++T +PL V Y LL IDVWEHAYYLD++N R DY+ ++V+W++V++R T Sbjct: 22 GSQSNSYTLPDLPYDYGALSPVISPEIMTLHHKKHHQTYVNNLN--IALDKLSSASSAKDVAQMIALQSAI--KFNGGGHV-NHSIFWTNLAPKNQDGGVAPSGPLADAINKQYGSIEKLIEKMSAETTAIQGSGWGWLGY-----------------DKANDRLVIQTQQNQDPLSVSGYVPLLGIDVWEHAYYLDYKNVRADYVKNIW-QIVNWKNVAERYNT 223
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_MACNE (Superoxide dismutase [Mn], mitochondrial OS=Macaca nemestrina GN=SOD2 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.670e-18 Identity = 68/222 (30.63%), Postives = 91/222 (40.99%), Query Frame = 1 Query: 115 KFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGD------LLPAFN-NAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPL--VWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 K L PY ALEPH++ ++ H KHH AYV+NLN E+ + KGD L PA N NH FW I+RDFGS GSGW WL + K++ L + +PL LL IDVWEHAYYL ++N RPDY+ + +++WE+V++R Sbjct: 25 KHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLN------------VTEEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFEKYKEKLTAASVGVQGSGWGWLGF-----------------NKERGQLQIAACLNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWN-VINWENVTER 216
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_STRPY (Superoxide dismutase [Mn] OS=Streptococcus pyogenes GN=sodA PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 4.859e-18 Identity = 61/207 (29.47%), Postives = 90/207 (43.48%), Query Frame = 1 Query: 136 PYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVG-TELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVS 747 PY +ALEP +T+ H KHH YV N + + E+G+ +LE+++ + + NN NH FW I+ FGS +FGSGWAWLV K+ L + T N P+ +L +DVWEHAYYL+++N RP+YI F + +++W+ VS Sbjct: 9 PYAYDALEPQFDAETMTLHHDKHHATYVANTDAALEKHPEIGE--NLEELLADVPKIPEDIRQALINNGGGHLNHALFWELLSPEKQDVTPDVAQA-IDDAFGSFDAFKEQFTAAATGRFGSGWAWLVVN-----------------KEGQLEITSTANQDTPISEGKKPILALDVWEHAYYLNYRNVRPNYIKAFFE-IINWKKVS 194
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_RABIT (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Oryctolagus cuniculus GN=SOD2 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.346e-18 Identity = 67/222 (30.18%), Postives = 91/222 (40.99%), Query Frame = 1 Query: 115 KFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGD------LLPAFN-NAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPL--VWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 K L PY ALEPH++ +E H KHH AYV+NLN + E+ + +GD L PA NH FW I+RDFGS GSGW WL + K++ L + +PL LL IDVWEHAYYL ++N RPDY+ + +++WE+V++R Sbjct: 6 KHSLPDLPYDYGALEPHINAQIMELHHSKHHAAYVNNLN------------ATEEKYREALARGDVTAHVALQPALKFKGGGHINHTIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKERLTAVSVGVQGSGWGWLGF-----------------NKEQGHLQIAACANQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWN-VITWENVTER 197
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_HORSE (Superoxide dismutase [Mn], mitochondrial OS=Equus caballus GN=SOD2 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.288e-18 Identity = 71/223 (31.84%), Postives = 93/223 (41.70%), Query Frame = 1 Query: 115 KFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGD------LLPAFN-NAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLL-VVKTPNAVNPL--VWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 K L Y ALEP+++ ++ H KHH AYV+NLN E+ + KGD L PA N NH FW I+RDFGS GSGW WL + KD+ L +V PN +PL LL IDVWEHAYYL ++N RPDY+ + +++WE+VS+R Sbjct: 25 KHSLPDLQYDYGALEPYINAQIMQLHHSKHHAAYVNNLNVT------------EEKYQEALAKGDVTAQIALQPALKFNGGGHINHTIFWTNLSPNGGGEPKGKLLDAIKRDFGSFDKFKEKLTAVSAGVQGSGWGWLGFN-----------------KDQGRLQIVACPNQ-DPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWN-VINWENVSER 216 The following BLAST results are available for this feature:
BLAST of CN185645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 180
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185645 ID=CN185645; Name=CN185645; organism=Citrus sinensis; type=EST; length=763bpback to top |