CN185645
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_HEVBR (Superoxide dismutase [Mn], mitochondrial OS=Hevea brasiliensis GN=SODA PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.149e-17 Identity = 68/217 (31.34%), Postives = 93/217 (42.86%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXL---IERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSL---LTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSK 750 F L PY ALEP +S + ++ H KHH+ Y+ N NK + +L D ++E A+ K FN NH FW L I+ DFGS GSGW WL +K+ LVV+T +PLV +L L IDVWEHAYYL ++N RPDY+ K+++W+ S+ Sbjct: 31 FSLPDLPYDYGALEPAISGEIMQLHHQKHHQTYITNYNKAL--EQLND--AIEKGDSAAVVKLQSAIKFNGGGHV-NHSIFWKNLAPVREGGGELPHGSLGWAIDADFGSLEKLIQLMNAEGAALQGSGWVWLAL-----------------DKELKKLVVETTANQDPLVTKGPTLVPLLGIDVWEHAYYLQYKNVRPDYLKNIW-KVMNWKYASE 224
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM2_CAEEL (Superoxide dismutase [Mn] 2, mitochondrial OS=Caenorhabditis elegans GN=sod-3 PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 5.372e-17 Identity = 67/224 (29.91%), Postives = 95/224 (42.41%), Query Frame = 1 Query: 106 ISAKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPA--------FNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 + +K L P+ LEP +S + ++ H KHH YV+NLN+ +E+ + + +KG+L A FN NH FW I+RDFGS GSGW WL Y +KDK L + N +PL L IDVWEHAYYL ++N RPDY+ K+ +W+++S+R Sbjct: 22 VRSKHTLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQ------------IEEKLHEAVSKGNLKEAIALQPALKFNGGGHI-NHSIFWTNLAKDGGEPSKELMDT-IKRDFGSLDNLQKRLSDITIAVQGSGWGWLGY----------------CKKDKILKIATCANQ-DPLE-GMVPLFGIDVWEHAYYLQYKNVRPDYVHAIW-KIANWKNISER 212
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODF_BACSU (Probable superoxide dismutase [Fe] OS=Bacillus subtilis GN=sodF PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 9.163e-17 Identity = 62/215 (28.84%), Postives = 94/215 (43.72%), Query Frame = 1 Query: 115 KFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 K L PY +ALEP++S+D + H KHH++YVD LNK +EL ++ ++ + ++ + +L AF+ A + H FW +I+ FGS G GWA LV+ P +L + + WD LL +DVWEHAYYL ++N R Y+ + + +V W KR E Sbjct: 79 KHVLPKLPYKYSALEPYISRDIMILHHTKHHQSYVDGLNK--AESELKKARATKNYDLITHWEREL--AFHGAGH-YLHSIFWFSMHPNGKRRPTGALFQMIDLSFGSYSAFKEHFTQASKKVEGVGWAILVW--------------APRSGRLEILTAEKHQLFSQ--WDVIPLLPLDVWEHAYYLQYKNDRASYVDHWWN-VVDWREAEKRFE 271
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_PRUPE (Superoxide dismutase [Mn], mitochondrial OS=Prunus persica GN=SOD PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.563e-16 Identity = 68/220 (30.91%), Postives = 91/220 (41.36%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXL---IERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSL---LTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 F L PY ALEP +S D ++ H HH+ YV N NK + +L D S D + + FN NH FW L I+ +FGS GSGW WL +K+ LVV+T +PLV +L L IDVWEHAYYL ++N RPDY+ K+++W+ S+ E Sbjct: 28 FSLPDLPYNYGALEPAISGDIMQLHHQNHHQTYVTNYNKAL--EQLHDAISKGDAPTVAKLHSAI--KFNGGGHI-NHSIFWKNLAPVREGGGEPPKGSLGWAIDTNFGSLEALVQKMNAEGAALQGSGWVWLAL-----------------DKELKKLVVETTANQDPLVTKGPTLVPLLGIDVWEHAYYLQYKNVRPDYLKNIW-KVINWKYASEVYE 224
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM1_CAEEL (Superoxide dismutase [Mn] 1, mitochondrial OS=Caenorhabditis elegans GN=sod-2 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.666e-16 Identity = 72/236 (30.51%), Postives = 98/236 (41.53%), Query Frame = 1 Query: 76 KMEQRKTG-GQISAKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGD------LLPAFN-NAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPL--VWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 K+ Q TG + +K L PY LEP +S + ++ H KHH YV+NLN+ +E+ + + +KG+ L PA N NH FW I+ DFGS GSGW WL Y K K L V N +PL L IDVWEHAYYL ++N RPDY++ K+ +W++VS+R Sbjct: 11 KLVQPITGVAAVRSKHSLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQ------------IEEKLHEAVSKGNVKEAIALQPALKFNGGGHINHSIFWTNLAKDGGEPSAELLTA-IKSDFGSLDNLQKQLSASTVAVQGSGWGWLGY----------------CPKGKILKVATCANQ-DPLEATTGLVPLFGIDVWEHAYYLQYKNVRPDYVNAIW-KIANWKNVSER 215
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_ONCVO (Superoxide dismutase [Mn], mitochondrial OS=Onchocerca volvulus GN=sod-2 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.482e-16 Identity = 65/216 (30.09%), Postives = 87/216 (40.28%), Query Frame = 1 Query: 115 KFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFW-XXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPN--AVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 K L PY ALEP +S + ++ H GKHH AYV+ LN+ + K +A G L FN NH FW I++DFGS GSGW WL Y ++ K L + PN + P L IDVWEHAYYL ++N RPD++ K+ +W+ +S R Sbjct: 25 KHVLPDLPYDYGALEPILSAEIMQVHHGKHHAAYVNALNQAEEKVKEALAKGDTQAAVA----GTKLMNFNTGGHI-NHTLFWEGLTAVKNSGEPNSELMTAIKKDFGSLETMIDKLNAKTIAIQGSGWGWLAY----------------DKEMKRLQLACCPNQDLLEPTT-GLIPLFCIDVWEHAYYLQYKNLRPDFVKAIW-KIANWKIISDR 217
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_GLOMM (Superoxide dismutase [Mn], mitochondrial OS=Glossina morsitans morsitans GN=Sod2 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.482e-16 Identity = 70/219 (31.96%), Postives = 87/219 (39.73%), Query Frame = 1 Query: 106 ISAKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNK-QIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPL--VWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 + K L PY AL P +SKD LE H GKHH+ YV+NLN + TE K + VV S N AFN NH +W IE F S GSGW WL Y ++K K L ++ N PL V L IDVWEHAYYL +N Y+ D + +W+ +S R Sbjct: 16 VRGKHTLPKLPYDYGALAPIISKDILEVHHGKHHQTYVNNLNAVEEQMTEAHSKKDVNKVVELSKNY-----AFNWGGHL-NHSIYW-QNLSPTKSEPSADLKKAIEEQFSSFEQFKKDLSALSIGVQGSGWGWLGY----------------NKKXKKLQILAVSNQ-EPLQAVTGLVPLFAIDVWEHAYYLQXKNXXAKYVEAXWD-IANWKBISDR 209
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_CAVPO (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Cavia porcellus GN=SOD2 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.548e-16 Identity = 61/203 (30.05%), Postives = 83/203 (40.89%), Query Frame = 1 Query: 106 ISAKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFN-NAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPL--VWDYSSLLTIDVWEHAYYLDFQNRRPDYI 705 + K L PY AL+PH++ + ++ H KHH AY++NLN I + + + DV + L PA N NH FW I+RDFGS GSGW WL + K++ L + + +PL LL IDVWEHAYYL +N RPDY+ Sbjct: 22 VRQKHSLPDLPYDYGALQPHINAEIMQLHHSKHHAAYLNNLN--IAEEKYQEALAKGDVTA----QVALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAVSVGVQGSGWGWLGF-----------------NKERGCLQIAACSNQDPLQGTTGLIPLLGIDVWEHAYYLQLKNVRPDYL 201
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_CHLTR (Superoxide dismutase [Mn] OS=Chlamydia trachomatis GN=sodA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.757e-16 Identity = 65/225 (28.89%), Postives = 99/225 (44.00%), Query Frame = 1 Query: 106 ISAKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLL---PAFN-NAAQAWNHDFFW---XXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPL--VWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 + + + L PY +ALEP +S + ++ H KHH+ Y++NLN+ + KSL DV A+ + L+ PA N NH FW LIE+ +GS GSGW WL + P +++ L+V+T +PL LL +DVWEHAYYL ++N R DY+ F +++W+ + R Sbjct: 2 VFSSYMLPALPYDYDALEPVISAEIMQLHHQKHHQGYINNLNEAL--------KSL-DVANATQDLARLIAINPALRFNGGSHINHSLFWEMLAPQGKGGGVPPRHELLKLIEKFWGSFDNFLKNFITSSAAVQGSGWGWLAF--------------CPQKQE---LMVQTTANQDPLEATTGMIPLLGVDVWEHAYYLQYKNARMDYLKSF-PSIINWDYIENR 199
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_NICPL (Superoxide dismutase [Mn], mitochondrial OS=Nicotiana plumbaginifolia GN=SODA PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.013e-15 Identity = 66/220 (30.00%), Postives = 92/220 (41.82%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXL---IERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSL---LTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 F L PY ALEP +S D ++ H HH+ YV N NK + +L D S D + + FN NH FW L I+ +FGS GSGW WL +K+ LV++T +PLV ++L L IDVWEHAYYL ++N RPDY+ K+++W+ ++ E Sbjct: 28 FSLPDLPYDYGALEPAISGDIMQLHHQNHHQTYVTNYNKAL--EQLHDAISKGDAPTVAKLHSAI--KFNGGGHI-NHSIFWKNLAPVREGGGEPPKGSLGWAIDTNFGSLEALVQKMNAEGAALQGSGWVWLGV-----------------DKELKRLVIETTANQDPLVSKGANLVPLLGIDVWEHAYYLQYKNVRPDYLKNIW-KVMNWKYANEVYE 224 The following BLAST results are available for this feature:
BLAST of CN185645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 180
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185645 ID=CN185645; Name=CN185645; organism=Citrus sinensis; type=EST; length=763bpback to top |