CN185645
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_HALMA (Superoxide dismutase [Mn] OS=Haloarcula marismortui GN=sod PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.495e-14 Identity = 57/213 (26.76%), Postives = 83/213 (38.97%), Query Frame = 1 Query: 121 ELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 EL P PY +ALEPH+S+ L +H HH+ YV+ L + L + + D ++ G++ +N + H FW IE DFGS GWA LVY K L V +W +L +DVWEH+YY D+ R D+I F + +V W+ ++ E Sbjct: 8 ELPPLPYDYDALEPHISEQVLTWHHDTHHQGYVNGL--ESAEETLAENRDAGDFGSSAAAMGNVT---HNGCGHYLHTLFWENMDPNGGGEPEGELLDRIEEDFGS--YEGWKGEFEAAASAAGGWALLVYDPVA----------------KQLRNVPVDKHDQGALWGSHPILALDVWEHSYYYDYGPARGDFIDAFFE-VVDWDKAAEEYE 196
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_DROME (Superoxide dismutase [Mn], mitochondrial OS=Drosophila melanogaster GN=Sod2 PE=2 SV=3) HSP 1 Score: 79.337 bits (194), Expect = 2.495e-14 Identity = 64/221 (28.96%), Postives = 87/221 (39.37%), Query Frame = 1 Query: 106 ISAKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFN-NAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYS--SLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 + K L PY ALEP + ++ +E H KHH+ YV+NLN +L + KS D L PA N NH FW IE + S GSGW WL + ++K L + PN +PL L IDVWEHAYYL ++N RP Y+ D + +W+ +S R + Sbjct: 15 VRGKHTLPKLPYDYAALEPIICREIMELHHQKHHQTYVNNLNA--AEEQLEEAKSKSDTTKLI----QLAPALRFNGGGHINHTIFWQNLSPNKTQPSDDLKKA-IESQWKSLEEFKKELTTLTVAVQGSGWGWLGF----------------NKKSGKLQLAALPNQ-DPLEASTGLIPLFGIDVWEHAYYLQYKNVRPSYVEAIWD-IANWDDISCRFQ 210
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODF_AERPE (Superoxide dismutase [Mn/Fe] OS=Aeropyrum pernix GN=sod PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.259e-14 Identity = 61/217 (28.11%), Postives = 90/217 (41.47%), Query Frame = 1 Query: 115 KFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFW--XXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 ++EL P PY NALEP++ ++ ++ H KHH YV N + E K L+ + +FN A H FW LIE+ FG T G GW L + P ++ +L V+ N + + +L IDVWEHAYYL ++N R Y+ + + +V+W+ V KRLE Sbjct: 6 RYELPPLPYNYNALEPYIIEEIMKLHHQKHHNTYVKGANAALEKIE----KHLKGEIQIDVRAVMRDFSFNYAGHIM-HTIFWPNMAPPGKGGGTPGGRVADLIEKQFGGFEKFKALFSAAAKTVEGVGWGVLAFD--------------PLTEELRILQVEKHNVL--MTAGLVPILVIDVWEHAYYLQYKNDRGSYVENWWN-VVNWDDVEKRLE 200
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM2_HALVO (Superoxide dismutase [Mn] 2 OS=Halobacterium volcanii GN=sod2 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.257e-14 Identity = 57/214 (26.64%), Postives = 88/214 (41.12%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 +EL P PY +ALEPH+S+ L +H HH+ YV+ N L + + + + G + +N + HD FW I DFGS +GWA LVY S + ++++V K +W +L +DVWEH+YY D+ R D++S F + +V W+ + R E Sbjct: 3 YELDPLPYEYDALEPHISEQVLTWHHDTHHQGYVNGWNAD--DETLAENREAGEF---GSSAGAVRNVTHNGSGHILHDLFWQNMSPEGGDEPEGLLAERIAEDFGSYEAWKGEFEAAAGA--AAGWALLVYDSF-------------SNQLRNVVVDKHDQGA---LWGSHPILALDVWEHSYYHDYGPARGDFVSAFFE-VVDWDEPAARYE 192
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM1_HALVO (Superoxide dismutase [Mn] 1 OS=Halobacterium volcanii GN=sod1 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.257e-14 Identity = 57/214 (26.64%), Postives = 88/214 (41.12%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 +EL P PY +ALEPH+S+ L +H HH+ YV+ N L + + + + G + +N + HD FW I DFGS +GWA LVY S + ++++V K +W +L +DVWEH+YY D+ R D++S F + +V W+ + R E Sbjct: 4 YELDPLPYEYDALEPHISEQVLTWHHDTHHQGYVNGWNAD--DETLAENREAGEF---GSSAGAVRNVTHNGSGHILHDLFWQNMSPEGGDEPEGLLAERIAEDFGSYEAWKGEFEAAAGA--AAGWALLVYDSF-------------SNQLRNVVVDKHDQGA---LWGSHPILALDVWEHSYYHDYGPARGDFVSAFFE-VVDWDEPAARYE 193
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM3_MAIZE (Superoxide dismutase [Mn] 3.3, mitochondrial OS=Zea mays GN=SODA.2 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.559e-14 Identity = 64/214 (29.91%), Postives = 88/214 (41.12%), Query Frame = 1 Query: 139 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPA--------FNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXL---IERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSL---LTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWE 738 Y ALEP +S + + H K+H YV N NK + + ++DVV+ KGD FN NH FW L I+ DFGS GSGW WL +K+ + V+T +PLV +SL L IDVWEHAYYL ++N RPDY++ K+++W+ Sbjct: 40 YDFGALEPVISGEIMRLHHQKNHATYVVNYNKAL--------EQIDDVVV----KGDDSAVVQLQGAIKFNGGGHV-NHSIFWKNLKPISEGGGEPPHGKLGWAIDEDFGSFEALVKRMNAEGAALQGSGWVWLAL-----------------DKEAKKVSVETTANQDPLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLNNIW-KVMNWK 222
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_NEUCR (Superoxide dismutase [Mn], mitochondrial OS=Neurospora crassa GN=sod-2 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.261e-14 Identity = 60/228 (26.32%), Postives = 89/228 (39.04%), Query Frame = 1 Query: 112 AKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDL------LPAFN-NAAQAWNHDFFW-----XXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 A + L PY NALEP++S +E H KHH+ YV NLN + V +A+ D+ PA N NH FW IE+ +GS GSGW WLV + S +K L + T +P+V + +D+WEHAYYL + N + Y+ K+++W++ +R + Sbjct: 32 ATYSLPQLPYAYNALEPYISAQIMELHHSKHHQTYVTNLNNAL------------KVHVAAIASSDIPAQIAQQPAIKFNGGGHINHSLFWKNLAPAETPETNYSKAAPSLAAEIEKTWGSFDEFKKAFSAALLGIQGSGWGWLVKE---------------STAEKGRLRIITTKDQDPVVGGEVPVFGVDMWEHAYYLQYLNGKAAYVENIW-KVINWKTAEERFQ 231
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM2_HALSA (Superoxide dismutase [Mn] 2 OS=Halobacterium salinarium GN=sod2 PE=3 SV=3) HSP 1 Score: 77.7962 bits (190), Expect = 7.261e-14 Identity = 55/212 (25.94%), Postives = 83/212 (39.15%), Query Frame = 1 Query: 112 AKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVS 747 ++ EL PY +ALEPH+S+ + +H HH++YVD LN L + + D + GD+ +N + H FW I DFGS SGWA LVY K L V N +W +L +DVWEH+YY D+ R ++ F + ++ W+ ++ Sbjct: 2 SQHELPSLPYDYDALEPHISEQVVTWHHDTHHQSYVDGLNS--AEETLAENRETGDHASTAGALGDVT---HNGCGHYLHTMFWEHMSPDGGGEPSGALADRIAADFGSYENWRAEFEVAAGA--ASGWALLVYDPVA----------------KQLRNVAVDNHDEGALWGSHPILALDVWEHSYYYDYGPDRGSFVDAFFE-VIDWDPIA 189
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_PROFR (Superoxide dismutase [Mn/Fe] OS=Propionibacterium freudenreichii subsp. shermanii GN=sodA PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.238e-13 Identity = 63/216 (29.17%), Postives = 95/216 (43.98%), Query Frame = 1 Query: 112 AKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFW--XXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 A + L PY +ALEP++S + +E H KHH+AYVD N + +L + + D + NK + AFN A NH FW I+ FGS GSGWA LV+ PL K + ++ + N L LL +D+WEHA+YL ++N + DY+ + + +V+W+ V+ R Sbjct: 1 AVYTLPELPYDYSALEPYISGEIMELHHDKHHKAYVDGANTAL--DKLAEARDKAD--FGAINKLEKDLAFNLAGHV-NHSVFWKNMAPKGSAPERPTDELGAAIDEFFGSFDNMKAQFTAAATGIQGSGWASLVW------------DPL----GKRINTLQFYDHQNNLPAGSIPLLQLDMWEHAFYLQYKNVKGDYVKSWWN-VVNWDDVALR 194
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_SCHPO (Superoxide dismutase [Mn], mitochondrial OS=Schizosaccharomyces pombe GN=sod2 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.617e-13 Identity = 60/222 (27.03%), Postives = 90/222 (40.54%), Query Frame = 1 Query: 106 ISAKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGK-SLE-DVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIER----DFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 + K L P PY NALEP +S+ ++ H KHH+ YV+NLN +L D LE +V + + K FN NH FW + + +GS + GSGWAWL+ +KD SL + T N + ++ ID WEHAYY ++NR+ +Y + +++W+ R Sbjct: 22 VHTKATLPPLPYAYNALEPALSETIMKLHHDKHHQTYVNNLNA--AQEKLADPNLDLEGEVALQAAIK------FNGGGHI-NHSLFWKILAPQKEGGGKPVTSGSLHKAITSKWGSLEDFQKEMNAALASIQGSGWAWLIV-----------------DKDGSLRITTTAN--QDTIVKSKPIIGIDAWEHAYYPQYENRKAEYFKAIWN-VINWKEAESR 214 The following BLAST results are available for this feature:
BLAST of CN185645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 180
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185645 ID=CN185645; Name=CN185645; organism=Citrus sinensis; type=EST; length=763bpback to top |