CN185645
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_CORDI (Superoxide dismutase [Mn] OS=Corynebacterium diphtheriae GN=sodA PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 8.027e-13 Identity = 53/207 (25.60%), Postives = 85/207 (41.06%), Query Frame = 1 Query: 139 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 Y +ALEPH++ + +E H KHH YV+ N + + V+ + +K DL AFN NH FW I ++FGS GSGWA L Y L++ + + + + + LL +D+WEHA+YL ++N + DY+ + + +W+ V+ R E Sbjct: 10 YAYDALEPHIAAEIMELHHSKHHANYVNGANAALEKLQKARENGEIGAVVTALSK-DL--AFNLGGHT-NHSIFWKNLSPNGGGEPTGALAEAIAKEFGSFEKFKDHFSAAALGLQGSGWAVLGYDHIGG----------------RLVIEQLTDQQGNISANLTPLLMLDMWEHAFYLQYKNVKADYVKAVWN-VFNWDDVAARFE 195
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_CHAFE (Superoxide dismutase [Mn], mitochondrial OS=Charybdis feriatus PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.027e-13 Identity = 61/196 (31.12%), Postives = 76/196 (38.78%), Query Frame = 1 Query: 115 KFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFN-NAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPL--VWDYSSLLTIDVWEHAYYLDFQNRR 693 K L PY ALEP +S + ++ H KHH+ YV+NLN + +L + K DV L PA N NH FW I RDFGS GSGW WL Y + +L + PN +PL L IDVWEHAYYL ++N R Sbjct: 21 KHTLPDLPYDYGALEPTISAEIMQLHHSKHHQTYVNNLN--VAEEKLAEAKEKGDVSTII----SLAPALRFNGGGHINHSIFW-QNLSADGGEPEGELLAAINRDFGSVENMKNQLSAQTVAVQGSGWGWLGY-----------------IAEGALQIATCPNQ-DPLEATTGLVPLFGIDVWEHAYYLQYKNVR 191
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_ASPOR (Superoxide dismutase [Mn], mitochondrial OS=Aspergillus oryzae GN=sodB PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 8.027e-13 Identity = 58/228 (25.44%), Postives = 85/228 (37.28%), Query Frame = 1 Query: 106 ISAKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLP-----AFNNAAQAWNHDFFW-----XXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 ++ F L P PY +ALEP + K +E H KHH+ Y+ NLN + S + +A+ N L+ FN NH FW IE +GS GSGW WLV + S KD+ + K P + +D+WEHAYYL + N + Y+ K+++W + R + Sbjct: 1 MATTFSLPPLPYAYDALEPVICKQIMEIHHQKHHQTYITNLNAAL---------SAQSTALAANNIPQLINLQQKIKFNGGGHI-NHSLFWKNLAPHASPETNIDQAAPVLKAAIEAQYGSVEKFKEAFGATLLGLQGSGWGWLV------ANGPGGKLEIVSTKDQDPVTDKVP------------VFGVDMWEHAYYLQYFNNKASYVEGIW-KVLNWRTAEDRFK 199
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_ASPFU (Superoxide dismutase [Mn], mitochondrial OS=Aspergillus fumigatus GN=sodB PE=1 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 2.336e-12 Identity = 59/225 (26.22%), Postives = 90/225 (40.00%), Query Frame = 1 Query: 106 ISAKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLN----KQIVGTELGDGKSLEDVVIA-SYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXL----IERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 +S ++ L P PYP +AL+P++S+ +E H KHH+ YV+ LN Q E D L V A +N G + NH FW + IE+ +GS GSGW WLV ++ K L + T + +P V + + +D+WEHAYYL + N + Y + +++W R Sbjct: 1 MSQQYTLPPLPYPYDALQPYISQQIMELHHKKHHQTYVNGLNAALEAQKKAAEANDVPKLVSVQQAIKFNGGGHI----------NHSLFWKNLAPEKSGGGKIDQAPVLKAAIEQRWGSFDKFKDAFNTTLLGIQGSGWGWLV-----------------TDGPKGKLDITTTHDQDP-VTGAAPVFGVDMWEHAYYLQYLNDKASYAKGIWN-VINWAEAENR 196
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODB_ASPNG (Superoxide dismutase [Mn], mitochondrial OS=Aspergillus niger GN=sodB PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.984e-12 Identity = 57/221 (25.79%), Postives = 82/221 (37.10%), Query Frame = 1 Query: 106 ISAKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFW-----XXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 +++K L PY +ALEP +SK +E H KHH+ YV+NLN + +L+ I FN NH FW IE+ +GS GSGW WLV S L + T +P+ + +D+WEHAYYL + N + Y+ K+++WE R Sbjct: 1 MTSKCTLPDLPYDYDALEPIISKQIMELHHKKHHQTYVNNLNAALA----SQASALDSNDITQLISIQQKLKFNGGGHI-NHSLFWKNLARYDSPATNLERSAPSLKDAIEKQWGSVKNFTDAFEAVLLGIQGSGWGWLV-----------------SSGKTGFLEIVTTKDQDPVTGPI-PVFGVDMWEHAYYLQYLNNKASYVQNIW-KVINWEEAEHR 197
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODF_MYCTU (Superoxide dismutase [Fe] OS=Mycobacterium tuberculosis GN=sodB PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.514e-11 Identity = 57/214 (26.64%), Postives = 83/214 (38.79%), Query Frame = 1 Query: 112 AKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 A++ L + ALEPH+S E H KHH YV N + +L + ++ ED N+ +L AFN A NH +W I FGS T GSGWA L + LL+ + + LL +D+WEHA+YL ++N + D+ F + +V+W V R Sbjct: 2 AEYTLPDLDWDYGALEPHISGQINELHHSKHHATYVKGANDAV--AKLEEARAKEDHSAILLNEKNL--AFNLAGHV-NHTIWWKNLSPNGGDKPTGELAAAIADAFGSFDKFRAQFHAAATTVQGSGWAALGW----------------DTLGNKLLIFQVYDHQTNFPLGIVPLLLLDMWEHAFYLQYKNVKVDFAKAFWN-VVNWADVQSR 193
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODF_MYCBO (Superoxide dismutase [Fe] OS=Mycobacterium bovis GN=sodB PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.514e-11 Identity = 57/214 (26.64%), Postives = 83/214 (38.79%), Query Frame = 1 Query: 112 AKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 A++ L + ALEPH+S E H KHH YV N + +L + ++ ED N+ +L AFN A NH +W I FGS T GSGWA L + LL+ + + LL +D+WEHA+YL ++N + D+ F + +V+W V R Sbjct: 2 AEYTLPDLDWDYGALEPHISGQINELHHSKHHATYVKGANDAV--AKLEEARAKEDHSAILLNEKNL--AFNLAGHV-NHTIWWKNLSPNGGDKPTGELAAAIADAFGSFDKFRAQFHAAATTVQGSGWAALGW----------------DTLGNKLLIFQVYDHQTNFPLGIVPLLLLDMWEHAFYLQYKNVKVDFAKAFWN-VVNWADVQSR 193
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_DEBHA (Probable superoxide dismutase [Mn], mitochondrial OS=Debaryomyces hansenii GN=DEHA2E01232g PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.582e-11 Identity = 62/224 (27.68%), Postives = 92/224 (41.07%), Query Frame = 1 Query: 115 KFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXL-----IERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPN---AVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLET 762 K EL + ++LEP++S E H KHH+ YV+ N I +L + +S DV A + ++ F+ NH FW I +GS + GSGWA++V + +L VV T N +PLV L+ ID WEHAYYL +QN + DY + +++WE SKR ++ Sbjct: 11 KIELPQLDWAYDSLEPYISGKINEIHHKKHHQTYVNGYNSAI--EQLIEAESQGDVKKAIVIQQNI--KFHGGGHT-NHVLFWKSLAPNSQNGGKHPGSDTNLGKKIIEQYGSIDNLISITNAKLASIQGSGWAFIVKN---------------KQNGGNLDVVTTYNQDTVTDPLV----PLIAIDAWEHAYYLQYQNVKADYFKAIWN-VINWEEASKRFDS 209
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_YEAST (Superoxide dismutase [Mn], mitochondrial OS=Saccharomyces cerevisiae GN=SOD2 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.513e-11 Identity = 61/228 (26.75%), Postives = 88/228 (38.60%), Query Frame = 1 Query: 115 KFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVI---ASYNKGDLLPAFNN----AAQAWNHDFFWXXXXXXXXXXXXXXXXXL---IERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPN---AVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 K L + ALEP++S E H+ KHH+ YV+ N T + + L D++ + N ++ N NH FW L I+ FGS GSGWA++V L VV+T N PLV L+ ID WEHAYYL +QN++ DY + +V+W+ S+R + Sbjct: 27 KVTLPDLKWDFGALEPYISGQINELHYTKHHQTYVNGFN-----TAVDQFQELSDLLAKEPSPANARKMIAIQQNIKFHGGGFTNHCLFWENLAPESQGGGEPPTGALAKAIDEQFGSLDELIKLTNTKLAGVQGSGWAFIVKNL---------------SNGGKLDVVQTYNQDTVTGPLV----PLVAIDAWEHAYYLQYQNKKADYFKAIWN-VVNWKEASRRFD 229
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_CANAL (Superoxide dismutase [Mn], mitochondrial OS=Candida albicans GN=SOD2 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.813e-11 Identity = 57/222 (25.68%), Postives = 83/222 (37.39%), Query Frame = 1 Query: 112 AKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFN-NAAQAWNHDFFW-----XXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 +K+ L Y +A EP++S E H+ KHH+ YV+NLN I K ++A L A N N NH +W I + FGS GSGWA++V ++ V+ T N + L+ ID WEHAYYL +QN + DY +++W+ +R E Sbjct: 34 SKYSLPELDYEFSATEPYISGQINEIHYTKHHQTYVNNLNASIEQAVEAKSKGEVKKLVA------LEKAINFNGGGYLNHCLWWKNLAPVSQGGGQPPSEDSKLGKQIVKQFGSLDKLIEITNGKLAGIQGSGWAFIVKN---------------KANGDTIDVITTANQDTVTDPNLVPLIAIDAWEHAYYLQYQNVKADYFKNLW-HVINWKEAERRFE 233 The following BLAST results are available for this feature:
BLAST of CN185645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 180
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185645 ID=CN185645; Name=CN185645; organism=Citrus sinensis; type=EST; length=763bpback to top |