CN185645
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM1_STAA3 (Superoxide dismutase [Mn/Fe] 1 OS=Staphylococcus aureus (strain USA300) GN=sodA PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.044e-28 Identity = 76/213 (35.68%), Postives = 101/213 (47.42%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSK 750 FEL PY +ALEPH K+T+E H +HH YV LN + GT+L + KS+E++V + S NN NH FW I+ +GS +FGSGWAWLV + L +V TPN NPL + +L +DVWEHAYYL +QN+RPDYI F + +V+WE V + Sbjct: 3 FELPKLPYAFDALEPHFDKETMEIHHDRHHNTYVTKLNAAVEGTDL-ESKSIEEIVANLDSVPANIQTAVRNNGGGHLNHSLFWELLSPNSEEKGTVVEK--IKEQWGSLEEFKKEFADKAAARFGSGWAWLVVN------------------NGQLEIVTTPNQDNPLTEGKTPILGLDVWEHAYYLKYQNKRPDYIGAFWN-VVNWEKVDE 193
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODF_CAMJJ (Superoxide dismutase [Fe] OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=sodB PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.044e-28 Identity = 80/221 (36.20%), Postives = 104/221 (47.06%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXL-------IERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 FEL+ PY NA +S +T +H GKHH YV NLN I TE GK L ++ S N G FNNAAQ +NHDF++ + +E++FGS FGSGW WLVY + K++ L V T NA P+ D LL +DVWEHAYY+D +N RP Y+ F ++WE V+K E Sbjct: 2 FELRKLPYDTNAFGDFLSAETFSYHHGKHHNTYVTNLNNLIKDTEFA-GKDLVSIIKTS-NGG----VFNNAAQVYNHDFYFDCIKPSTGCGCGGSCQSIDANLQAALEKEFGSLENFKAEFIKGATGVFGSGWFWLVY----------------NTKNQKLEFVGTSNAATPITEDKVPLLVVDVWEHAYYVDHRNARPAYLEKFYAH-INWEFVAKAYE 199
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODF_CAMJE (Superoxide dismutase [Fe] OS=Campylobacter jejuni GN=sodB PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.044e-28 Identity = 80/221 (36.20%), Postives = 104/221 (47.06%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXL-------IERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 FEL+ PY NA +S +T +H GKHH YV NLN I TE GK L ++ S N G FNNAAQ +NHDF++ + +E++FGS FGSGW WLVY + K++ L V T NA P+ D LL +DVWEHAYY+D +N RP Y+ F ++WE V+K E Sbjct: 2 FELRKLPYDTNAFGDFLSAETFSYHHGKHHNTYVTNLNNLIKDTEFA-GKDLVSIIKTS-NGG----VFNNAAQVYNHDFYFDCIKPSTGCGCGGSCQSIDANLQAALEKEFGSLENFKAEFIKGATGVFGSGWFWLVY----------------NTKNQKLEFVGTSNAATPITEDKVPLLVVDVWEHAYYVDHRNARPAYLEKFYAH-INWEFVAKAYE 199
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM1_BACCR (Superoxide dismutase [Mn] 1 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=sodA1 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.363e-28 Identity = 78/214 (36.45%), Postives = 101/214 (47.20%), Query Frame = 1 Query: 136 PYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVG-TELGDGKSLEDVVIASYNKGDLLPAF-----NNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 PY +ALEPH K+T+ H KHH Y+ NLN + G EL D KS+E++V N ++ A NN NH FFW IE FGS T+FGSGWAWLV + L V TPN +PL + ++ +DVWEHAYYL++QNRRPDYI F + +V W + KR + Sbjct: 25 PYAYDALEPHFDKETMNIHHTKHHNTYITNLNAALEGHAELAD-KSVEELVA---NLNEVPEAIRTAVRNNGGGHANHTFFWTILSPNGGGQPVGELATAIEAKFGSFDAFKEEFAKAGATRFGSGWAWLVVN------------------NGELEVTSTPNQDSPLTEGKTPVIGLDVWEHAYYLNYQNRRPDYIGAFWN-VVDWNAAEKRYQ 215
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_BACSU (Superoxide dismutase [Mn] OS=Bacillus subtilis GN=sodA PE=1 SV=5) HSP 1 Score: 126.331 bits (316), Expect = 1.780e-28 Identity = 75/213 (35.21%), Postives = 101/213 (47.42%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSK 750 +EL PY +ALEPH+ K+T+ H KHH YV NLNK + G KS+E++V + S + NN NH FW I FGS +FGSGWAWLV + L + TPN +PL + +L +DVWEHAYYL++QNRRPDYIS F + +V+W+ V++ Sbjct: 3 YELPELPYAYDALEPHIDKETMTIHHTKHHNTYVTNLNKAVEGNTALANKSVEELVADLDSVPENIRTAVRNNGGGHANHKLFWTLLSPNGGGEPTGALAEEINSVFGSFDKFKEQFAAAAAGRFGSGWAWLVVN------------------NGKLEITSTPNQDSPLSEGKTPILGLDVWEHAYYLNYQNRRPDYISAFWN-VVNWDEVAR 196
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_DEIRA (Superoxide dismutase [Mn] OS=Deinococcus radiodurans GN=sodA PE=1 SV=3) HSP 1 Score: 125.946 bits (315), Expect = 2.325e-28 Identity = 83/227 (36.56%), Postives = 108/227 (47.58%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV-----IASYNKGDLLPAFNNAAQAWNHDFFW----XXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDY------SSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 + L PY +ALEPH+ T+E H KHH+ YVDN NK + GTE D +E ++ + + KG L NNA NH FW I FGS T+FGSGWAWLV KD L VV T N NPL+ + + +L +DVWEHAYYL++QNRRPDY++ F + +V+W+ VSKR Sbjct: 3 YTLPQLPYAYDALEPHIDARTMEIHHTKHHQTYVDNANKALEGTEFAD-LPVEQLIQQLDRVPADKKGALR---NNAGGHANHSMFWQIMGQGQGQNGANQPSGELLDAINSAFGSFDAFKQKFEDAAKTRFGSGWAWLVV------------------KDGKLDVVSTANQDNPLMGEAIAGVSGTPILGVDVWEHAYYLNYQNRRPDYLAAFWN-VVNWDEVSKR 206
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODF_PORGI (Superoxide dismutase [Mn/Fe] OS=Porphyromonas gingivalis GN=sodB PE=1 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 2.325e-28 Identity = 78/211 (36.97%), Postives = 104/211 (49.29%), Query Frame = 1 Query: 121 ELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 EL PY ++AL P +SK+T+EFH GKH + YVDNLNK I+GTE + L +V S +G + FNNA Q NH+ ++ I++ FGS T FGSGW WL S+ + L + K PNA NP+ + LL DVWEHAYYL +QNRR D++ +V W+ V R Sbjct: 4 ELISLPYAVDALAPVISKETVEFHHGKHLKTYVDNLNKLIIGTEF-ENADLNTIVQKS--EGGI---FNNAGQTLNHNLYFTQFRPGKGGAPKGKLGEAIDKQFGSFEKFKEEFNTAGTTLFGSGWVWLA-----------------SDANGKLSIEKEPNAGNPVRKGLNPLLGFDVWEHAYYLTYQNRRADHLKDLW-SIVDWDIVESR 190
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_ACIAD (Superoxide dismutase [Mn] OS=Acinetobacter sp. (strain ADP1) GN=sodA PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.036e-28 Identity = 85/222 (38.29%), Postives = 107/222 (48.20%), Query Frame = 1 Query: 112 AKFELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDV--VIASYNKGDLLPAFNNAAQAWNHDFFW-XXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSS-----LLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 A+F+ P PY NAL+P + + T+E H+GKHH+AYVDNLN QI D L + I+ YN NN +NH FFW I +DFGS +FGSGWAWL+ P+ K L V TPN NPL+ D S LL +DVWEHAYYL +QNRR DYI F +V+W V++R Sbjct: 23 AEFKQAPLPYATNALQPAIDQQTMEIHYGKHHKAYVDNLNAQIKTYPELDKTDLIQLQKQISKYNTA----VRNNGGGHFNHTFFWESLAATNKTGQPSPALVKQITQDFGSLDAFKQKFNEAASGRFGSGWAWLIV--------------TPNGK---LAVTSTPNQDNPLM-DLSETKGTPLLGLDVWEHAYYLKYQNRRADYIKAFW-SVVNWNKVNER 221
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODF_PLAVI (Superoxide dismutase [Fe] OS=Plasmodium vivax GN=SODB PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.179e-28 Identity = 72/208 (34.62%), Postives = 101/208 (48.56%), Query Frame = 1 Query: 139 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYS-SLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 Y LNAL PH+S++TL FH+ KHH YV+ LN I T + KSL D+V S FNNAAQ WNH F+W I+ DFGS FGSGW WL + L++++T +A NP+ + +LT D+WEHAYY+D++N R Y+ + + LV+W ++ L+ Sbjct: 10 YALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFAE-KSLLDIVKESSG-----AIFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLAL-----------------NNNNKLVILQTHDAGNPIKDNTGIPILTCDIWEHAYYIDYRNDRASYVKAWWN-LVNWNFANENLK 193
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODF_PLAFX (Superoxide dismutase [Fe] OS=Plasmodium falciparum (isolate HB3) GN=SODB PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.179e-28 Identity = 72/208 (34.62%), Postives = 101/208 (48.56%), Query Frame = 1 Query: 139 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYS-SLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 Y LNAL PH+S++TL FH+ KHH YV+ LN I T + KSL D+V S FNNAAQ WNH F+W I+ DFGS FGSGW WL + L++++T +A NP+ + +LT D+WEHAYY+D++N R Y+ + + LV+W ++ L+ Sbjct: 10 YALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFAE-KSLLDIVKESSG-----AIFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLAL-----------------NNNNKLVILQTHDAGNPIKDNTGIPILTCDIWEHAYYIDYRNDRASYVKAWWN-LVNWNFANENLK 193 The following BLAST results are available for this feature:
BLAST of CN185645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 180
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185645 ID=CN185645; Name=CN185645; organism=Citrus sinensis; type=EST; length=763bpback to top |