CN185645
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODF_PLAFA (Superoxide dismutase [Fe] OS=Plasmodium falciparum GN=SODB PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.179e-28 Identity = 72/208 (34.62%), Postives = 101/208 (48.56%), Query Frame = 1 Query: 139 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYS-SLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 Y LNAL PH+S++TL FH+ KHH YV+ LN I T + KSL D+V S FNNAAQ WNH F+W I+ DFGS FGSGW WL + L++++T +A NP+ + +LT D+WEHAYY+D++N R Y+ + + LV+W ++ L+ Sbjct: 10 YALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFAE-KSLLDIVKESSG-----AIFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLAL-----------------NNNNKLVILQTHDAGNPIKDNTGIPILTCDIWEHAYYIDYRNDRASYVKAWWN-LVNWNFANENLK 193
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODF_PLAF7 (Superoxide dismutase [Fe] OS=Plasmodium falciparum (isolate 3D7) GN=SODB PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.179e-28 Identity = 72/208 (34.62%), Postives = 101/208 (48.56%), Query Frame = 1 Query: 139 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYS-SLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 Y LNAL PH+S++TL FH+ KHH YV+ LN I T + KSL D+V S FNNAAQ WNH F+W I+ DFGS FGSGW WL + L++++T +A NP+ + +LT D+WEHAYY+D++N R Y+ + + LV+W ++ L+ Sbjct: 10 YALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFAE-KSLLDIVKESSG-----AIFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLAL-----------------NNNNKLVILQTHDAGNPIKDNTGIPILTCDIWEHAYYIDYRNDRASYVKAWWN-LVNWNFANENLK 193
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODF_CAMCO (Superoxide dismutase [Fe] OS=Campylobacter coli GN=sodB PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.507e-27 Identity = 77/221 (34.84%), Postives = 102/221 (46.15%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXL-------IERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 FEL+ PY NA +S +T +H GKHH YV NLN I TE K L ++ +S FNNAAQ +NHDF++ + +E++FGS FGSGW WLVY + K++ L V T NA P+ D LL +DVWEHAYY+D +N RP Y+ F ++WE V+K E Sbjct: 2 FELRKLPYDTNAFGDFLSAETFSYHHGKHHNTYVTNLNNLIKYTEFAS-KDLVSIIKSSSGG-----VFNNAAQVYNHDFYFDCIKPITGCGCGGSCQSMDANLQAALEKEFGSLENFKAEFIKGATGVFGSGWFWLVY----------------NTKNQKLEFVGTSNAATPITEDKVPLLVVDVWEHAYYVDHRNARPAYLEKFYAH-INWEFVAKAYE 199
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM2_PLEBO (Superoxide dismutase [Mn] 2 OS=Plectonema boryanum GN=sodA2 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.570e-27 Identity = 70/216 (32.41%), Postives = 103/216 (47.69%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 FELKP PY +ALEP++ T++ H KHH AYV+NLN I S+ED+V + + NNA NH FW I FGS +FGSGW WLV + L ++ TPN +PL+ ++ ++ DVWEHAYYL +QNRRP+Y++ + + +++WE +++R + Sbjct: 3 FELKPLPYAYDALEPYIDATTMQLHHDKHHAAYVNNLNAAIEKYSDLQSMSVEDLVTHLDRVPEDVRTTVRNNAGGHVNHTMFWEIMGANGSGAPTGAISEAINNSFGSFDAFKQQFNDAGTKRFGSGWVWLV-----------------RSQQGDLQILSTPNQDSPLIEGHTPIMGNDVWEHAYYLKYQNRRPEYLNAWWN-VLNWEEINRRFD 200
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_XANCP (Superoxide dismutase [Mn] OS=Xanthomonas campestris pv. campestris GN=sodA PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.726e-27 Identity = 71/214 (33.18%), Postives = 102/214 (47.66%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLL--PAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 + L PY +ALEP++ T+E H KHH+ Y++N+N + GTE D +E++V + + L P NN NH FW I++D G ++FGSGWAWL DK ++V T N +PL + +L +DVWEHAYYL +QNRRPDYI F + +V+W+ V +R Sbjct: 3 YTLPQLPYAYDALEPNIDAQTMEIHHTKHHQTYINNVNAALEGTEYAD-LPVEELVSKLKSLPENLQGPVRNNGGGHANHSLFWTVMSPNGGGEPKGEVAKAIDKDIGGFEKFKEAFTKAALSRFGSGWAWLSVTP-----------------DKKVVVESTANQDSPLFEGNTPILGLDVWEHAYYLKYQNRRPDYIGAFYN-VVNWDEVERR 197
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_XANC8 (Superoxide dismutase [Mn] OS=Xanthomonas campestris pv. campestris (strain 8004) GN=sodA PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.726e-27 Identity = 71/214 (33.18%), Postives = 102/214 (47.66%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLL--PAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 + L PY +ALEP++ T+E H KHH+ Y++N+N + GTE D +E++V + + L P NN NH FW I++D G ++FGSGWAWL DK ++V T N +PL + +L +DVWEHAYYL +QNRRPDYI F + +V+W+ V +R Sbjct: 3 YTLPQLPYAYDALEPNIDAQTMEIHHTKHHQTYINNVNAALEGTEYAD-LPVEELVSKLKSLPENLQGPVRNNGGGHANHSLFWTVMSPNGGGEPKGEVAKAIDKDIGGFEKFKEAFTKAALSRFGSGWAWLSVTP-----------------DKKVVVESTANQDSPLFEGNTPILGLDVWEHAYYLKYQNRRPDYIGAFYN-VVNWDEVERR 197
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_LISMO (Superoxide dismutase [Mn] OS=Listeria monocytogenes GN=sodA PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.726e-27 Identity = 72/216 (33.33%), Postives = 101/216 (46.76%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 +EL PY +ALEP+ K+T+E H+ KHH YV LN+ + G KS E++V + S + N+ NH FW IE +FG+ +FGSGWAWLV D L +V T N +PL + +L +DVWEHAYYL FQNRRP+YI F + +++W+ +KR + Sbjct: 3 YELPKLPYTYDALEPNFDKETMEIHYTKHHNTYVTKLNEAVAGHPELASKSAEELVTNLDSVPEDIRGAVRNHGGGHANHTLFWSILSPNGGGAPTGNLKAAIESEFGTFDEFKEKFNAAAAARFGSGWAWLVVN------------------DGKLEIVSTANQDSPLSDGKTPVLGLDVWEHAYYLKFQNRRPEYIETFWN-VINWDEANKRFD 199
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODF_PLAMA (Superoxide dismutase [Fe] OS=Plasmodium malariae GN=SODB PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.726e-27 Identity = 71/208 (34.13%), Postives = 100/208 (48.08%), Query Frame = 1 Query: 139 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYS-SLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 Y LNAL PH+S++TL FH+ KHH YV+ LN I T + KSL D+V S FNNAAQ WNH F+W I+ DFGS FGSGW WL + L++++T +A NP+ + +LT D+WEHAY +D++N R Y+ + + LV+W ++ L+ Sbjct: 10 YALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFAE-KSLLDIVKESSG-----AIFNNAAQIWNHTFYWDSMGPDCGGEPHGGIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLAL-----------------NNNNKLVILQTHDAGNPIKDNTGIPILTCDIWEHAYCIDYRNDRASYVKAWWN-LVNWNFANENLK 193
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_HAEIN (Superoxide dismutase [Mn] OS=Haemophilus influenzae GN=sodA PE=1 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 7.479e-27 Identity = 82/219 (37.44%), Postives = 103/219 (47.03%), Query Frame = 1 Query: 139 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVG-----TELGDGKSLEDV-VIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSS------LLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 Y NALEPH T+E H KHH+AYV+N N + G E+ G + ++ I + +G L NNA NH FW IERDFGS T+FGSGWAWLV + L VV T N NPL+ + LL +DVWEHAYYL FQNRRPDYI F + +V+W+ V++R E Sbjct: 10 YAYNALEPHFDAQTMEIHHSKHHQAYVNNANAALEGLPAELVEMYPGHLISNLDKIPAEKRGALR---NNAGGHTNHSLFWKSLKKGTTLQGALKDA--IERDFGSVDAFKAEFEKAAATRFGSGWAWLVLTA-----------------EGKLAVVSTANQDNPLMGKEVAGCEGFPLLGLDVWEHAYYLKFQNRRPDYIKEFWN-VVNWDFVAERFE 205
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_YEREN (Superoxide dismutase [Mn] OS=Yersinia enterocolitica GN=sodA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.276e-26 Identity = 81/224 (36.16%), Postives = 103/224 (45.98%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAF------NNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSS------LLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 + L PY +ALEPH K T+E H KHH+ YV+N N + S+ED++ D +PA NNA NH FW IERDFGS T+FGSGWAWLV K D L VV T N +PL+ + S ++ +DVWEHAYYL FQNRRPDYI F + +V+W+ + R Sbjct: 3 YSLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANTVLESFPELAKFSVEDLI----KDLDKVPAEKRTFMRNNAGGHANHSLFWKGLKLGTTLTGDLKAA--IERDFGSVDSFKEKFEAAAATRFGSGWAWLVLKD-----------------DGKLAVVSTANQDSPLMGEAVSGASGFPIVGLDVWEHAYYLKFQNRRPDYIKAFWN-VVNWDEAAAR 202 The following BLAST results are available for this feature:
BLAST of CN185645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 180
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185645 ID=CN185645; Name=CN185645; organism=Citrus sinensis; type=EST; length=763bpback to top |