CN185645
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_SHIFL (Superoxide dismutase [Mn] OS=Shigella flexneri GN=sodA PE=3 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 2.842e-26 Identity = 82/224 (36.61%), Postives = 104/224 (46.43%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAF------NNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSS------LLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 + L PY +ALEPH K T+E H KHH+ YV+N N + +E+++ K D LPA NNA NH FW IERDFGS ++FGSGWAWLV K DK L VV T N +PL+ + S +L +DVWEHAYYL FQNRRPDYI F + +V+W+ + R Sbjct: 3 YTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELI----TKLDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAA--IERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKG-----------------DK-LAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQNRRPDYIKEFWN-VVNWDEAAAR 201
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_SALTI (Superoxide dismutase [Mn] OS=Salmonella typhi GN=sodA PE=3 SV=3) HSP 1 Score: 119.013 bits (297), Expect = 2.842e-26 Identity = 82/224 (36.61%), Postives = 104/224 (46.43%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAF------NNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSS------LLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 + L PY +ALEPH K T+E H KHH+ YV+N N + +E+++ K D +PA NNA NH FW IERDFGS T+FGSGWAWLV K DK L VV T N +PL+ + S +L +DVWEHAYYL FQNRRPDYI F + +V+W+ + R Sbjct: 3 YTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALENLPEFADLPVEELI----TKLDQVPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAA--IERDFGSVDNFKAEFEKAAATRFGSGWAWLVLKG-----------------DK-LAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQNRRPDYIKEFWN-VVNWDEAAAR 201
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_ECO57 (Superoxide dismutase [Mn] OS=Escherichia coli O157:H7 GN=sodA PE=3 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 2.842e-26 Identity = 82/224 (36.61%), Postives = 104/224 (46.43%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAF------NNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSS------LLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 + L PY +ALEPH K T+E H KHH+ YV+N N + +E+++ K D LPA NNA NH FW IERDFGS ++FGSGWAWLV K DK L VV T N +PL+ + S +L +DVWEHAYYL FQNRRPDYI F + +V+W+ + R Sbjct: 3 YTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELI----TKLDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAA--IERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKG-----------------DK-LAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQNRRPDYIKEFWN-VVNWDEAAAR 201
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_ECOLI (Superoxide dismutase [Mn] OS=Escherichia coli (strain K12) GN=sodA PE=1 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 4.848e-26 Identity = 81/224 (36.16%), Postives = 104/224 (46.43%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAF------NNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSS------LLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 + L PY +ALEPH K T+E H KHH+ YV+N N + +E+++ K D LPA NNA NH FW IERDFGS ++FGSGWAWLV K DK L VV T N +PL+ + S ++ +DVWEHAYYL FQNRRPDYI F + +V+W+ + R Sbjct: 3 YTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELI----TKLDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAA--IERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKG-----------------DK-LAVVSTANQDSPLMGEAISGASGFPIMGLDVWEHAYYLKFQNRRPDYIKEFWN-VVNWDEAAAR 201
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM2_STAAB (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=sodM PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.331e-26 Identity = 71/213 (33.33%), Postives = 102/213 (47.89%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSK 750 F+L PY +ALEP++ + T+EFH KHH YV LN + GTEL + +SL D++ + + + NN +NH FW I+ +G+ T FGSGW WLV + L +V TPN NPL + +L DVWEHAYYL +QN+RPDY++ F + +V+W+ V + Sbjct: 3 FKLPNLPYAYDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTEL-EHQSLADMIANLDKVPEAMRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDD--IKAQWGTLDEFKNEFANKATTLFGSGWTWLVVN------------------NGKLEIVTTPNQDNPLTEGKTPILLFDVWEHAYYLKYQNKRPDYMTAFWN-IVNWKKVDE 193
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODF_HELPY (Superoxide dismutase [Fe] OS=Helicobacter pylori GN=sodB PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.269e-26 Identity = 73/214 (34.11%), Postives = 103/214 (48.13%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 F L+ P+ +++ +S +FH GKHH+ YV+NLN I GT+ + SL D++ S FNNAAQ +NHDF+W L E+DFGS T FGSGW W Y L ++K + +++T NA P+ LL +DVWEHAYY+D +N RP Y+ F ++W VS+ E Sbjct: 2 FTLRELPFAKDSMGDFLSPVAFDFHHGKHHQTYVNNLNNLIKGTDF-EKSSLFDILTKSSGG-----VFNNAAQIYNHDFYWDCLSPKATALSDELKGAL-EKDFGSLEKFKEDFIKSATTLFGSGWNWAAYN-------------LDTQK---IEIIQTSNAQTPVTDKKVPLLVVDVWEHAYYIDHKNARPVYLEKFYGH-INWHFVSQCYE 191
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_PSEAE (Superoxide dismutase [Mn] OS=Pseudomonas aeruginosa GN=sodA PE=3 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 1.080e-25 Identity = 70/212 (33.02%), Postives = 98/212 (46.23%), Query Frame = 1 Query: 124 LKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 L P PY +ALEPH+ T+E H KHH+ YV+NLN + GT + + +E ++ +A + P NN NH FW I+ G T+FGSGWAWL SLLV + N +PL+ + +L +DVWEHAYYL +QNRRP+YI F + ++ W V++R Sbjct: 5 LPPLPYAYDALEPHIDALTMEIHHSKHHQTYVNNLNAALEGTPYAE-QPVESLLRQLAGLPEKLRTPVVNNGGGHANHSLFWTVMSPQGGGRPDGDLGRAIDEQLGGFEAFKDAFTKAALTRFGSGWAWLSVTPQG-----------------SLLVESSGNQDSPLMNGNTPILGLDVWEHAYYLKYQNRRPEYIGAFYN-VIDWREVARR 197
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_LISIN (Superoxide dismutase [Mn] OS=Listeria innocua GN=sodA PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.080e-25 Identity = 71/216 (32.87%), Postives = 101/216 (46.76%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 +EL PY +ALEP+ K+T+E H+ KHH YV LN+ + G K +E++V + S + N+ NH FW IE +FG+ +FGSGWAWLV + L +V T N +PL + +L +DVWEHAYYL FQNRRP+YI F + +V+W+ +KR + Sbjct: 3 YELPKLPYTYDALEPNFDKETMELHYTKHHNTYVTKLNEAVSGHPELAEKPVEELVANLDSVPEDIRGAVRNHGGGHANHTLFWSILSPNGGGAPTGDLKSAIESEFGTFDDFKEKFNAAAAARFGSGWAWLVVN------------------NGKLEIVSTANQDSPLSDGKTPVLGLDVWEHAYYLKFQNRRPEYIDTFWN-VVNWDEANKRFD 199
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODF_HELPJ (Superoxide dismutase [Fe] OS=Helicobacter pylori J99 GN=sodB PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.142e-25 Identity = 73/214 (34.11%), Postives = 102/214 (47.66%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 F L+ P+ +++ +S +FH GKHH+ YV+NLN I GT+ KS ++ + G FNNAAQ +NHDF+W L E+DFGS T FGSGW W Y L ++K + +++T NA P+ LL +DVWEHAYY+D +N RP Y+ F V+W VS+ E Sbjct: 2 FTLRELPFAKDSMGDFLSPVAFDFHHGKHHQTYVNNLNNLIKGTDFE--KSSLFAILTKSSGG----VFNNAAQIYNHDFYWDCLSPKATALSDELKEAL-EKDFGSLEKFKEDFIKSATTLFGSGWNWAAYN-------------LDTQK---IEIIQTSNAQTPVTDKKVPLLVVDVWEHAYYIDHKNARPVYLEKFYGH-VNWHFVSQCYE 191
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_LISIV (Superoxide dismutase [Mn] OS=Listeria ivanovii GN=sodA PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.000e-25 Identity = 71/216 (32.87%), Postives = 98/216 (45.37%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVG-TELGDGKSLEDVVIASYNKGDLLPAFNNAAQAW-NHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 +EL PY +ALEP+ K+T+E H+ KHH YV LN+ + G EL E V ++ A N NH FW IE +FG+ +FGSGWAWLV + L +V T N +PL + +L +DVWEHAYYL FQNRRP+YI F + +++W+ +KR + Sbjct: 3 YELPKLPYTYDALEPNFDKETMEIHYTKHHNIYVTKLNEAVSGHAELASKPGEELVANLDSVPEEIRGAVRNHGGGHANHTLFWSSLSPNGGGAPTGNLKAAIESEFGTFDEFKEKFNAAAAARFGSGWAWLVVN------------------NGKLEIVSTANQDSPLSEGKTPVLGLDVWEHAYYLKFQNRRPEYIDTFWN-VINWDERNKRFD 199 The following BLAST results are available for this feature:
BLAST of CN185645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 180
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185645 ID=CN185645; Name=CN185645; organism=Citrus sinensis; type=EST; length=763bpback to top |