CN185645
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_CHLRE (Superoxide dismutase [Mn], mitochondrial OS=Chlamydomonas reinhardtii GN=SODA PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.559e-24 Identity = 78/225 (34.67%), Postives = 100/225 (44.44%), Query Frame = 1 Query: 124 LKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKG---DLLPAF------NNAAQAWNHDFFWXXXXXXXXXXXXXXXXXL-IERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSS------LLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSK 750 L P PY +LEPH+ T+ H KHH+ YV+NLN L L+D+ + NK D LP NN +NH FFW IE FGS +FGSGWAWL K D SL + TPN NPL+ LL +DVWEHAYYL +QNRRP+YI+ + + +V+WE V++ Sbjct: 5 LPPLPYDYGSLEPHVDATTMNIHHTKHHQTYVNNLN-----AALDKFPELKDLGLVDLNKAVGTDKLPKDVATVIRNNGGGHYNHSFFWKVMTNPSNTNGPNGDVKAAIEASFGSVDEMKAKFNAAAAGRFGSGWAWLSVKP-----------------DGSLSIDSTPNQDNPLMTALPDVAGGIPLLGLDVWEHAYYLKYQNRRPEYIAAWWN-VVNWEQVAE 206
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_PASMU (Superoxide dismutase [Mn] OS=Pasteurella multocida GN=sodA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.537e-24 Identity = 77/215 (35.81%), Postives = 99/215 (46.05%), Query Frame = 1 Query: 139 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGT-ELGDGKSLEDVVIASYNKGDLLPAF-NNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSS------LLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 Y +ALEPH T+E H KHH+AYV+N N + EL G + + + D L A NN NH FW I RDFGS T+FGSGWAWLV +++ L VV T N +P++ + LL +DVWEHAYYL FQNRRPDYI F +V+W+ V++R E Sbjct: 10 YAYDALEPHFDAMTMEIHHSKHHQAYVNNANAALENLPELAQGCPGQLLTKLAEVPADKLTAIRNNVGGHLNHSLFWKSLKKGTTLQGALKDA--IVRDFGSVEAFQAEFEKAAATRFGSGWAWLVL-----------------QENGKLAVVSTANQDSPVMGKAIAGCEGYPLLGLDVWEHAYYLKFQNRRPDYIKEFW-HVVNWDFVAERFE 204
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_LACLM (Superoxide dismutase [Mn] OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=sodA PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.739e-24 Identity = 75/216 (34.72%), Postives = 99/216 (45.83%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVI-ASYNKGDLLPAF-NNAAQAWNHDFFWXXXXXXXXXXXXXXXXXL---IERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSK 750 F L PY NALEP + T+ H GKHH+ YV+NLN I D SLE+++ S D+ A NN NH FW + I ++FGS +FGSGWAWLV ++ L VV T N NP+ + +L +DVWEHAYYL + N RPDYI F + LV+W+ V++ Sbjct: 3 FTLPELPYAPNALEPFFDEATMRLHHGKHHQTYVNNLNAAIEKHNELDDLSLEELLTDLSAIPEDIRTAVRNNGGGHLNHSQFWLWLRPNTDGSENHADGEIGDAIAKEFGSFETFKTEFKAAATGRFGSGWAWLVV-----------------DEAGKLKVVSTANQDNPISEGLTPVLGLDVWEHAYYLKYHNVRPDYIEAFFN-LVNWDKVNE 200
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_LACLA (Superoxide dismutase [Mn] OS=Lactococcus lactis subsp. lactis GN=sodA PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.739e-24 Identity = 75/216 (34.72%), Postives = 99/216 (45.83%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVI-ASYNKGDLLPAF-NNAAQAWNHDFFWXXXXXXXXXXXXXXXXXL---IERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSK 750 F L PY NALEP + T+ H GKHH+ YV+NLN I D SLE+++ S D+ A NN NH FW + I ++FGS +FGSGWAWLV ++ L VV T N NP+ + +L +DVWEHAYYL + N RPDYI F + LV+W+ V++ Sbjct: 3 FTLPELPYAPNALEPFFDEATMRLHHGKHHQTYVNNLNAAIEKHNELDDLSLEELLTDLSAIPEDIRTAVRNNGGGHLNHSQFWLWLRPNTDGSENHADGEIGDAIAKEFGSFETFKTEFKAAATGRFGSGWAWLVV-----------------DEAGKLKVVSTANQDNPISEGLTPVLGLDVWEHAYYLKYHNVRPDYIEAFFN-LVNWDKVNE 200
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_HAEDU (Superoxide dismutase [Mn] OS=Haemophilus ducreyi GN=sodA PE=3 SV=4) HSP 1 Score: 110.923 bits (276), Expect = 7.739e-24 Identity = 75/224 (33.48%), Postives = 102/224 (45.54%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLN----KQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSS------LLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 ++L Y +ALEP+ K+T+E H KHH+AYV+N N K E G L+D+ K + NN NH FW + RDFGS T+FGSGWAWLV + + L VV T N +P++ + + T+DVWEHAYYL +QNRRPDYI F + +V+W+ S+R E Sbjct: 3 YQLPELGYAYDALEPYFDKETMEIHHSKHHQAYVNNSNALLEKHPELLEKCPGALLKDLTQVPAEKRTAVR--NNLGGHVNHTLFWKGLKTGTTLQGALKDAII--RDFGSVEAFQAEFEQAAATRFGSGWAWLVLE------------------EGKLAVVSTANQDSPIMGKDVAGVSGYPIFTLDVWEHAYYLHYQNRRPDYIKAFWN-VVNWDEASRRFE 203
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_ENTFA (Superoxide dismutase [Fe] OS=Enterococcus faecalis GN=sodA PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.739e-24 Identity = 74/215 (34.42%), Postives = 103/215 (47.91%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVG-TELGDGKSLEDVVIASYNK--GDLLPAF-NNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSK 750 + L PY +ALEP++ +T+ H KHH YV NLN I ELG+ KS+E++ I+ N D+ A NN NH FFW I+ FGS +FGSGWAWLV + L + TPN +PL+ + +L +DVWEHAYYL ++N RPDYI F + +V+W+ V++ Sbjct: 3 YTLPELPYAYDALEPYIDVETMHLHHDKHHNTYVTNLNAAIEKHPELGE-KSVENL-ISDMNAIPEDIRTAVRNNGGGHANHTFFWEIMAPNAGGQPTGAIKEAIDETFGSFDEMKAAFKTAATGRFGSGWAWLVVN------------------NGKLEITSTPNQDSPLMDGQTPVLGLDVWEHAYYLKYKNVRPDYIEAFWN-VVNWDKVNE 196
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_PASHA (Superoxide dismutase [Mn] OS=Pasteurella haemolytica GN=sodA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.320e-23 Identity = 72/217 (33.18%), Postives = 98/217 (45.16%), Query Frame = 1 Query: 139 YPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVG----TELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSS------LLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 759 Y +ALEPH T+E H KHH+AY++N N + E G ++D+ K + NN NH FW IERDFGS T+ GSGWAWLV + + L VV T N NPL+ + +L +DVWEHAYYL++QNRRPD+I F + +V+W+ ++R E Sbjct: 10 YAYDALEPHFDAKTMEIHHSKHHQAYINNANAALEAHPELLEKCPGALIKDLSQVPAEKR--IAVRNNVGGHVNHTLFWKGLKTGTTLQGALKEA--IERDFGSVEAFQSEFEKAATTRVGSGWAWLVLE------------------EGKLAVVSTANQDNPLMGKEVAGVSGYPILVLDVWEHAYYLNYQNRRPDFIKAFWN-VVNWDEAARRFE 203
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_PSEPU (Superoxide dismutase [Mn] OS=Pseudomonas putida GN=sodA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.841e-23 Identity = 67/208 (32.21%), Postives = 93/208 (44.71%), Query Frame = 1 Query: 136 PYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLL--PAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 753 PY +ALEPH+ T+E H KHH+ YV+ LN I GTE + +E +V A + L N+ NH FW I G T+FGSGWAWL K+L+V + N +PL++ + + +DVWEHAYYL +QNRRP+YI F + ++ W V +R Sbjct: 9 PYAYDALEPHIDAQTMEIHHTKHHQTYVNGLNAAIEGTEWAEWP-VEKLVGAVKQLPESLRGAVTNHGGGHANHSLFWTVMSPQGGGEPHGQLAQAIASQLGGFDAFKEAFTKAALTRFGSGWAWLSVTP-----------------QKTLVVESSGNQDSPLMFGNTPIFGLDVWEHAYYLKYQNRRPEYIGAFYN-VIDWAEVERR 197
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_THET8 (Superoxide dismutase [Mn] OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=sodA PE=1 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 5.016e-23 Identity = 66/209 (31.58%), Postives = 93/209 (44.50%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWE 738 F+L YP ALEPH+ T+E H KHH AYV NLN + G +E ++ +A+ + NN NH FW I+ FG +FGSGWAWLV + L V+ TPN NP++ ++ ++ IDVWEHAYYL +QNRR DY+ + +++W+ Sbjct: 5 FKLPDLGYPYEALEPHIDAKTMEIHHQKHHGAYVTNLNAALEKYPYLHGVEVEVLLRHLAALPQDIQTAVRNNGGGHLNHSLFWRLLTPGGAKEPVGELKKAIDEQFGGFQALKEKLTQAAMGRFGSGWAWLV-----------------KDPFGKLHVLSTPNQDNPVMEGFTPIVGIDVWEHAYYLKYQNRRADYLQAIWN-VLNWD 195
BLAST of CN185645 vs. ExPASy Swiss-Prot
Match: SODM_THET2 (Superoxide dismutase [Mn] OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=sodA PE=3 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 5.016e-23 Identity = 66/209 (31.58%), Postives = 93/209 (44.50%), Query Frame = 1 Query: 118 FELKPPPYPLNALEPHMSKDTLEFHWGKHHRAYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXXLIERDFGSXXXXXXXXXXXXXTQFGSGWAWLVYKXXXXXXXXXXXXPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWE 738 F+L YP ALEPH+ T+E H KHH AYV NLN + G +E ++ +A+ + NN NH FW I+ FG +FGSGWAWLV + L V+ TPN NP++ ++ ++ IDVWEHAYYL +QNRR DY+ + +++W+ Sbjct: 5 FKLPDLGYPYEALEPHIDAKTMEIHHQKHHGAYVTNLNAALEKYPYLHGVEVEVLLRHLAALPQDIQTAVRNNGGGHLNHSLFWRLLTPGGAKEPVGELKKAIDEQFGGFQALKEKLTQAAMGRFGSGWAWLV-----------------KDPFGKLHVLSTPNQDNPVMEGFTPIVGIDVWEHAYYLKYQNRRADYLQAIWN-VLNWD 195 The following BLAST results are available for this feature:
BLAST of CN185645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 180
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185645 ID=CN185645; Name=CN185645; organism=Citrus sinensis; type=EST; length=763bpback to top |