CN185644
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODM_STRPY (Superoxide dismutase [Mn] OS=Streptococcus pyogenes GN=sodA PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.542e-12 Identity = 45/148 (30.41%), Postives = 62/148 (41.89%), Query Frame = -2 Query: 300 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAK 743 NN NH FW I+ FGS +FGSGWAWLV K+ L + T N P+ +L +DVWEHAYYL+++N RP+YI F + +++W+ VS + AK Sbjct: 73 NNGGGHLNHALFWELLSPEKQDVTPDVAQA-IDDAFGSFDAFKEQFTAAATGRFGSGWAWLVVN-----------------KEGQLEITSTANQDTPISEGKKPILALDVWEHAYYLNYRNVRPNYIKAFFE-IINWKKVSALYQAAK 201
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODM_STRR6 (Superoxide dismutase [Mn] OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=sodA PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.320e-12 Identity = 46/148 (31.08%), Postives = 59/148 (39.86%), Query Frame = -2 Query: 300 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAK 743 NN NH FW I+ FGS T+FGSGWAWLV K+ L V T N P+ +L +DVWEHAYY+ ++N RPDYI F +++W V + AK Sbjct: 73 NNGGGHLNHALFWELMTPEKTAPSAELAAA-IDATFGSFEEFQAAFTAAATTRFGSGWAWLVVN-----------------KEGKLEVTSTANQDTPISEGKKPILGLDVWEHAYYVKYRNVRPDYIKAFF-SVINWNKVDELYAAAK 201
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODM_STRPN (Superoxide dismutase [Mn] OS=Streptococcus pneumoniae GN=sodA PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.320e-12 Identity = 46/148 (31.08%), Postives = 59/148 (39.86%), Query Frame = -2 Query: 300 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAK 743 NN NH FW I+ FGS T+FGSGWAWLV K+ L V T N P+ +L +DVWEHAYY+ ++N RPDYI F +++W V + AK Sbjct: 73 NNGGGHLNHALFWELMTPEKTAPSAELAAA-IDATFGSFEEFQAAFTAAATTRFGSGWAWLVVN-----------------KEGKLEVTSTANQDTPISEGKKPILGLDVWEHAYYVKYRNVRPDYIKAFF-SVINWNKVDELYAAAK 201
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODM_STRAG (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae GN=sodA PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.320e-12 Identity = 45/149 (30.20%), Postives = 63/149 (42.28%), Query Frame = -2 Query: 297 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAKA 743 NN NH FW I FGS +FGSGWAWLV + L V+ T N P++ +L +DVWEHAYYL+++N RP+YI F + +++W V++ + AKA Sbjct: 73 NNGGGHLNHALFWELMSPEETQISQELSED-INATFGSFEDFKAAFTAAATGRFGSGWAWLVVNA-----------------EGKLEVLSTANQDTPIMEGKKPILGLDVWEHAYYLNYRNVRPNYIKAFFE-IINWNKVNELYQAAKA 202
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODM_STRA5 (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae serotype V GN=sodA PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.320e-12 Identity = 45/149 (30.20%), Postives = 63/149 (42.28%), Query Frame = -2 Query: 297 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAKA 743 NN NH FW I FGS +FGSGWAWLV + L V+ T N P++ +L +DVWEHAYYL+++N RP+YI F + +++W V++ + AKA Sbjct: 73 NNGGGHLNHALFWELMSPEETQISQELSED-INATFGSFEDFKAAFTAAATGRFGSGWAWLVVNA-----------------EGKLEVLSTANQDTPIMEGKKPILGLDVWEHAYYLNYRNVRPNYIKAFFE-IINWNKVNELYQAAKA 202
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODM_STRA3 (Superoxide dismutase [Mn/Fe] OS=Streptococcus agalactiae serotype III GN=sodA PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.320e-12 Identity = 45/149 (30.20%), Postives = 63/149 (42.28%), Query Frame = -2 Query: 297 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAKA 743 NN NH FW I FGS +FGSGWAWLV + L V+ T N P++ +L +DVWEHAYYL+++N RP+YI F + +++W V++ + AKA Sbjct: 73 NNGGGHLNHALFWELMSPEETQISQELSED-INATFGSFEDFKAAFTAAATGRFGSGWAWLVVNA-----------------EGKLEVLSTANQDTPIMEGKKPILGLDVWEHAYYLNYRNVRPNYIKAFFE-IINWNKVNELYQAAKA 202
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODM_DICDI (Superoxide dismutase [Mn], mitochondrial OS=Dictyostelium discoideum GN=sod2 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.152e-11 Identity = 47/145 (32.41%), Postives = 63/145 (43.45%), Query Frame = -2 Query: 300 NHDFFWXXXXXXXXXXXXXXXXGL---IERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPL-VWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAK 722 NH FW L I + +GS GSGW WL Y +K LV++T +PL V Y LL IDVWEHAYYLD++N R DY+ ++V+W++V++R TAK Sbjct: 99 NHSIFWTNLAPKNQDGGVAPSGPLADAINKQYGSIEKLIEKMSAETTAIQGSGWGWLGY-----------------DKANDRLVIQTQQNQDPLSVSGYVPLLGIDVWEHAYYLDYKNVRADYVKNIW-QIVNWKNVAERYNTAK 225
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODM_BUCBP (Superoxide dismutase [Mn] OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=sodA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.152e-11 Identity = 45/149 (30.20%), Postives = 65/149 (43.62%), Query Frame = -2 Query: 315 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSS------LLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 743 NNA NH FW ++E++F S + FGSGW WL+ K D +L +V T N PL+ S +L +D+WEHAYYL ++N R DY++ F + +V+W+ VS R Sbjct: 73 NNAGGHINHSLFWKWLKLNTILKDDFKI--ILEKNFKSVDFFKKQFEKIALSHFGSGWIWLIKKY-----------------DNTLRIVTTVNQNTPLMGKEISGISGIPILGLDLWEHAYYLKYKNNRSDYVNAFWN-VVNWDEVSYR 201
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODM_BUCAP (Superoxide dismutase [Mn] OS=Buchnera aphidicola subsp. Schizaphis graminum GN=sodA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.152e-11 Identity = 48/150 (32.00%), Postives = 62/150 (41.33%), Query Frame = -2 Query: 312 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSS------LLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 743 NNA NH FW I + FGS FGSGW WLV ++ L +V T N NPL+ S + +D+WEHAYYL +QNRR DYI F + +V+W+ S+RL Sbjct: 73 NNAGGHINHSLFWKGLKIGTILQGDLKSE--INKQFGSVEYFKSKFEDIALNHFGSGWIWLV------------------NQNGILSIVSTINQDNPLMGKSISGTHGNPIFGLDLWEHAYYLKYQNRRLDYIKSFWN-VVNWDEASRRL 201
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODM_BORPE (Superoxide dismutase [Mn] OS=Bordetella pertussis GN=sodA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.152e-11 Identity = 39/97 (40.21%), Postives = 54/97 (55.67%), Query Frame = -2 Query: 297 QFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAKA 587 +FGSGWAWL P+ + L V + N +PL+ + +L +DVWEHAYYL +QNRRP+YI F ++V W V++R E A A Sbjct: 126 RFGSGWAWLTVT--------------PAGR---LRVDSSANQDSPLMEGNTPILGLDVWEHAYYLQYQNRRPEYIEAFY-RVVDWAEVARRYEIALA 204 The following BLAST results are available for this feature:
BLAST of CN185644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185644 ID=CN185644; Name=CN185644; organism=Citrus sinensis; type=EST; length=807bpback to top |