CN185644
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODM1_BACAN (Superoxide dismutase [Mn] 1 OS=Bacillus anthracis GN=sodA1 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.049e-18 Identity = 54/148 (36.49%), Postives = 67/148 (45.27%), Query Frame = -2 Query: 300 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAK 743 NN NH FFW IE FGS AT+FGSGWAWLV + L V TPN +PL + ++ +DVWEHAYYL++QNRRPDYI F + +V W + KR + AK Sbjct: 75 NNGGGHANHTFFWTILSPNGGGQPVGELATAIEAKFGSFDAFKEEFAKAGATRFGSGWAWLVVN------------------NGELEVTSTPNQDSPLTEGKTPVIGLDVWEHAYYLNYQNRRPDYIGAFWN-VVDWNAAEKRYQEAK 203
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODM_YEREN (Superoxide dismutase [Mn] OS=Yersinia enterocolitica GN=sodA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.538e-17 Identity = 59/154 (38.31%), Postives = 71/154 (46.10%), Query Frame = -2 Query: 300 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSS------LLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAK 743 NNA NH FW IERDFGS AT+FGSGWAWLV K D L VV T N +PL+ + S ++ +DVWEHAYYL FQNRRPDYI F + +V+W+ + R AK Sbjct: 74 NNAGGHANHSLFWKGLKLGTTLTGDLKAA--IERDFGSVDSFKEKFEAAAATRFGSGWAWLVLKD-----------------DGKLAVVSTANQDSPLMGEAVSGASGFPIVGLDVWEHAYYLKFQNRRPDYIKAFWN-VVNWDEAAARFAQAK 207
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODM_BACCA (Superoxide dismutase [Mn] OS=Bacillus caldotenax GN=sodA PE=3 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 3.427e-17 Identity = 51/149 (34.23%), Postives = 69/149 (46.31%), Query Frame = -2 Query: 297 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAKA 743 NN NH FW I + FGS A +FGSGWAWLV + L + TPN +P++ + +L +DVWEHAYYL +QNRRP+YI+ F + +V+W+ V+KR AKA Sbjct: 74 NNGGGHANHSLFWTILSPNGGGEPTGELAEAINKKFGSFTAFKDEFSKAAAGRFGSGWAWLVVN------------------NGELEITSTPNQDSPIMEGKTPILGLDVWEHAYYLKYQNRRPEYIAAFWN-IVNWDEVAKRYSEAKA 203
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODM_HAEIN (Superoxide dismutase [Mn] OS=Haemophilus influenzae GN=sodA PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 4.476e-17 Identity = 60/155 (38.71%), Postives = 71/155 (45.81%), Query Frame = -2 Query: 297 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSS------LLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAKA 743 NNA NH FW IERDFGS AT+FGSGWAWLV + L VV T N NPL+ + LL +DVWEHAYYL FQNRRPDYI F + +V+W+ V++R E A Sbjct: 75 NNAGGHTNHSLFWKSLKKGTTLQGALKDA--IERDFGSVDAFKAEFEKAAATRFGSGWAWLVLTA-----------------EGKLAVVSTANQDNPLMGKEVAGCEGFPLLGLDVWEHAYYLKFQNRRPDYIKEFWN-VVNWDFVAERFEQKTA 209
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODM_BACST (Superoxide dismutase [Mn] OS=Bacillus stearothermophilus GN=sodA PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 4.476e-17 Identity = 51/149 (34.23%), Postives = 69/149 (46.31%), Query Frame = -2 Query: 297 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAKA 743 NN NH FW I + FGS A +FGSGWAWLV + L + TPN +P++ + +L +DVWEHAYYL +QNRRP+YI+ F + +V+W+ V+KR AKA Sbjct: 74 NNGGGHANHSLFWTILSPNGGGEPTGELADAINKKFGSFTAFKDEFSKAAAGRFGSGWAWLVVN------------------NGELEITSTPNQDSPIMEGKTPILGLDVWEHAYYLKYQNRRPEYIAAFWN-VVNWDEVAKRYSEAKA 203
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODF_CAMJJ (Superoxide dismutase [Fe] OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=sodB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.476e-17 Identity = 59/175 (33.71%), Postives = 79/175 (45.14%), Query Frame = -2 Query: 303 GKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGL-------IERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETA 806 GK L ++ S N G FNNAAQ +NHDF++ + +E++FGS FGSGW WLVY + K++ L V T NA P+ D LL +DVWEHAYY+D +N RP Y+ F ++WE V+K E A Sbjct: 49 GKDLVSIIKTS-NGG----VFNNAAQVYNHDFYFDCIKPSTGCGCGGSCQSIDANLQAALEKEFGSLENFKAEFIKGATGVFGSGWFWLVY----------------NTKNQKLEFVGTSNAATPITEDKVPLLVVDVWEHAYYVDHRNARPAYLEKFYAH-INWEFVAKAYEWA 201
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODF_CAMJE (Superoxide dismutase [Fe] OS=Campylobacter jejuni GN=sodB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.476e-17 Identity = 59/175 (33.71%), Postives = 79/175 (45.14%), Query Frame = -2 Query: 303 GKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGL-------IERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETA 806 GK L ++ S N G FNNAAQ +NHDF++ + +E++FGS FGSGW WLVY + K++ L V T NA P+ D LL +DVWEHAYY+D +N RP Y+ F ++WE V+K E A Sbjct: 49 GKDLVSIIKTS-NGG----VFNNAAQVYNHDFYFDCIKPSTGCGCGGSCQSIDANLQAALEKEFGSLENFKAEFIKGATGVFGSGWFWLVY----------------NTKNQKLEFVGTSNAATPITEDKVPLLVVDVWEHAYYVDHRNARPAYLEKFYAH-INWEFVAKAYEWA 201
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODF_HELPJ (Superoxide dismutase [Fe] OS=Helicobacter pylori J99 GN=sodB PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.846e-17 Identity = 54/149 (36.24%), Postives = 70/149 (46.98%), Query Frame = -2 Query: 300 FNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAK 746 FNNAAQ +NHDF+W L E+DFGS T FGSGW W Y L ++K + +++T NA P+ LL +DVWEHAYY+D +N RP Y+ F V+W VS+ E AK Sbjct: 64 FNNAAQIYNHDFYWDCLSPKATALSDELKEAL-EKDFGSLEKFKEDFIKSATTLFGSGWNWAAYN-------------LDTQK---IEIIQTSNAQTPVTDKKVPLLVVDVWEHAYYIDHKNARPVYLEKFYGH-VNWHFVSQCYEWAK 194
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODF_BACFR (Superoxide dismutase [Fe] OS=Bacteroides fragilis GN=sodB PE=3 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 5.846e-17 Identity = 58/166 (34.94%), Postives = 76/166 (45.78%), Query Frame = -2 Query: 312 GKSLEDVVIASYNKGDLLPAFNNAAQAWNHD-FFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 806 GK++E ++AS G + FNNA Q NH +F I+RDFGS FGSGWAWL +KD L + K PN NP+ LL DVWEHAYYLD+QNRR D+++ + ++ W+ V KRL Sbjct: 50 GKTVE-AIVASAPDGAI---FNNAGQVLNHTLYFLQFAPKPAKNEPAGKLGEAIKRDFGSFENFKKEFNAASVGLFGSGWAWLSV-----------------DKDGKLHITKEPNGSNPVRAGLKPLLGFDVWEHAYYLDYQNRRADHVNKLWE-IIDWDVVEKRL 193
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODF_BABBO (Superoxide dismutase [Fe] OS=Babesia bovis GN=SODB PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.846e-17 Identity = 58/167 (34.73%), Postives = 74/167 (44.31%), Query Frame = -2 Query: 309 GKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSS-LLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 806 G LE I G FNNAAQ WNH F+W IE FGS A FGSGW WLV K D + +V+T +A +PL + LL DVWEHAYY+D++N R YI+ + + LV+W+ +K LE Sbjct: 45 GTPLESCTIEELILGQTGAVFNNAAQIWNHTFYWNSMGPNCGGEPTGPIRKKIEEKFGSFSAFKTDFSNLLAGHFGSGWGWLVLKD-----------------DGTADIVQTHDAGSPLKENLGRPLLCCDVWEHAYYIDYKNDRLSYINSWWN-LVNWDFANKNLE 193 The following BLAST results are available for this feature:
BLAST of CN185644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185644 ID=CN185644; Name=CN185644; organism=Citrus sinensis; type=EST; length=807bpback to top |