CN185644
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODF_HELPY (Superoxide dismutase [Fe] OS=Helicobacter pylori GN=sodB PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.635e-17 Identity = 53/149 (35.57%), Postives = 70/149 (46.98%), Query Frame = -2 Query: 300 FNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAK 746 FNNAAQ +NHDF+W L E+DFGS T FGSGW W Y L ++K + +++T NA P+ LL +DVWEHAYY+D +N RP Y+ F ++W VS+ E AK Sbjct: 64 FNNAAQIYNHDFYWDCLSPKATALSDELKGAL-EKDFGSLEKFKEDFIKSATTLFGSGWNWAAYN-------------LDTQK---IEIIQTSNAQTPVTDKKVPLLVVDVWEHAYYIDHKNARPVYLEKFYGH-INWHFVSQCYEWAK 194
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODM_STACA (Superoxide dismutase [Mn/Fe] OS=Staphylococcus carnosus GN=sodA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 9.972e-17 Identity = 57/169 (33.73%), Postives = 76/169 (44.97%), Query Frame = -2 Query: 303 KSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETA 803 KS+E++V + S NN NH FW I+ ++GS A QFGSGWAWLV +KD L +V TPN NP+ + +L +DVWEHAYYL +QN+RPDYI F + +V+W V + E A Sbjct: 51 KSIEEIVANLDSVPSDIQTAVRNNGGGHLNHSLFWQLLTPNSEEKGTVIDK--IKEEWGSLDKFKDEFAKKAAGQFGSGWAWLVV-----------------DKDGKLEIVSTPNQDNPITEGKTPILGLDVWEHAYYLKYQNKRPDYIDAFWN-VVNWNKVDELYEAA 199
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODF_CAMCO (Superoxide dismutase [Fe] OS=Campylobacter coli GN=sodB PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 9.972e-17 Identity = 53/155 (34.19%), Postives = 71/155 (45.81%), Query Frame = -2 Query: 303 FNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGL-------IERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETA 746 FNNAAQ +NHDF++ + +E++FGS FGSGW WLVY + K++ L V T NA P+ D LL +DVWEHAYY+D +N RP Y+ F ++WE V+K E A Sbjct: 64 FNNAAQVYNHDFYFDCIKPITGCGCGGSCQSMDANLQAALEKEFGSLENFKAEFIKGATGVFGSGWFWLVY----------------NTKNQKLEFVGTSNAATPITEDKVPLLVVDVWEHAYYVDHRNARPAYLEKFYAH-INWEFVAKAYEWA 201
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODM_SALTY (Superoxide dismutase [Mn] OS=Salmonella typhimurium GN=sodA PE=3 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 1.302e-16 Identity = 60/154 (38.96%), Postives = 71/154 (46.10%), Query Frame = -2 Query: 300 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSS------LLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAK 743 NNA NH FW IERDFGS AT+FGSGWAWLV K DK L VV T N +PL+ + S +L +DVWEHAYYL FQNRRPDYI F + +V+W+ + R K Sbjct: 74 NNAGGHANHSLFWKGLKKGTTLQGDLKAA--IERDFGSVDNFKAEFEKAAATRFGSGWAWLVLKG-----------------DK-LAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQNRRPDYIKEFWN-VVNWDEAAARFAAKK 206
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODM_SALTI (Superoxide dismutase [Mn] OS=Salmonella typhi GN=sodA PE=3 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 1.302e-16 Identity = 60/154 (38.96%), Postives = 71/154 (46.10%), Query Frame = -2 Query: 300 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSS------LLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAK 743 NNA NH FW IERDFGS AT+FGSGWAWLV K DK L VV T N +PL+ + S +L +DVWEHAYYL FQNRRPDYI F + +V+W+ + R K Sbjct: 74 NNAGGHANHSLFWKGLKKGTTLQGDLKAA--IERDFGSVDNFKAEFEKAAATRFGSGWAWLVLKG-----------------DK-LAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQNRRPDYIKEFWN-VVNWDEAAARFAAKK 206
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODM_DEIRA (Superoxide dismutase [Mn] OS=Deinococcus radiodurans GN=sodA PE=1 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 1.302e-16 Identity = 58/158 (36.71%), Postives = 72/158 (45.57%), Query Frame = -2 Query: 300 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXG----LIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDY------SSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAK 743 NNA NH FW G I FGS T+FGSGWAWLV K D L VV T N NPL+ + + +L +DVWEHAYYL++QNRRPDY++ F + +V+W+ VSKR AK Sbjct: 73 NNAGGHANHSMFWQIMGQGQGQNGANQPSGELLDAINSAFGSFDAFKQKFEDAAKTRFGSGWAWLVVK------------------DGKLDVVSTANQDNPLMGEAIAGVSGTPILGVDVWEHAYYLNYQNRRPDYLAAFWN-VVNWDEVSKRYAAAK 211
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODF_METJ (Superoxide dismutase [Mn/Fe] OS=Methylomonas J GN=sodB PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.302e-16 Identity = 51/152 (33.55%), Postives = 67/152 (44.08%), Query Frame = -2 Query: 297 PAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAKA 752 P NN NH FW I+ D G T+FGSGWAWL +K L+V T N +PL + +L +DVWEHAYYL +QNRRP+YI F + +V+W+ VS+R + A A Sbjct: 69 PVRNNGGGHANHSLFWKVLTPNGGGEPKGALADAIKSDIGGLDTFKEAFTKAALTRFGSGWAWLSVTP-----------------EKKLVVESTGNQDSPLSTGNTPILGLDVWEHAYYLKYQNRRPEYIGAFFN-VVNWDEVSRRYQEALA 202
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODM_XANCP (Superoxide dismutase [Mn] OS=Xanthomonas campestris pv. campestris GN=sodA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.701e-16 Identity = 50/152 (32.89%), Postives = 66/152 (43.42%), Query Frame = -2 Query: 297 PAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAKA 752 P NN NH FW I++D G ++FGSGWAWL DK ++V T N +PL + +L +DVWEHAYYL +QNRRPDYI F + +V+W+ V +R A A Sbjct: 70 PVRNNGGGHANHSLFWTVMSPNGGGEPKGEVAKAIDKDIGGFEKFKEAFTKAALSRFGSGWAWLSVTP-----------------DKKVVVESTANQDSPLFEGNTPILGLDVWEHAYYLKYQNRRPDYIGAFYN-VVNWDEVERRYHAAIA 203
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODM_XANC8 (Superoxide dismutase [Mn] OS=Xanthomonas campestris pv. campestris (strain 8004) GN=sodA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.701e-16 Identity = 50/152 (32.89%), Postives = 66/152 (43.42%), Query Frame = -2 Query: 297 PAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAKA 752 P NN NH FW I++D G ++FGSGWAWL DK ++V T N +PL + +L +DVWEHAYYL +QNRRPDYI F + +V+W+ V +R A A Sbjct: 70 PVRNNGGGHANHSLFWTVMSPNGGGEPKGEVAKAIDKDIGGFEKFKEAFTKAALSRFGSGWAWLSVTP-----------------DKKVVVESTANQDSPLFEGNTPILGLDVWEHAYYLKYQNRRPDYIGAFYN-VVNWDEVERRYHAAIA 203
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODM_STAS1 (Superoxide dismutase [Mn/Fe] OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=sodA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.901e-16 Identity = 57/170 (33.53%), Postives = 77/170 (45.29%), Query Frame = -2 Query: 300 KSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAK 803 KS+E++V + S + NN NH FW I+ +GS A +FGSGWAWLV + +L +V TPN NPL + +L +DVWEHAYYL +QN+RPDYIS F + +V+WE V + AK Sbjct: 51 KSIEEIVANLDSVPENIQTAVRNNGGGHLNHSLFWELLTPNSEEKGTVVDK--IKEQWGSLDAFKEEFADKAAARFGSGWAWLVVN------------------NGNLEIVTTPNQDNPLTEGKTPILGLDVWEHAYYLKYQNKRPDYISAFWN-VVNWEKVDELYNAAK 199 The following BLAST results are available for this feature:
BLAST of CN185644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185644 ID=CN185644; Name=CN185644; organism=Citrus sinensis; type=EST; length=807bpback to top |