CN185644
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODF_PLAMA (Superoxide dismutase [Fe] OS=Plasmodium malariae GN=SODB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.472e-15 Identity = 51/168 (30.36%), Postives = 74/168 (44.05%), Query Frame = -2 Query: 303 KSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYS-SLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETA 803 KSL D+V S FNNAAQ WNH F+W I+ DFGS FGSGW WL + L++++T +A NP+ + +LT D+WEHAY +D++N R Y+ + + LV+W ++ L+ A Sbjct: 51 KSLLDIVKESSGA-----IFNNAAQIWNHTFYWDSMGPDCGGEPHGGIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALN-----------------NNNKLVILQTHDAGNPIKDNTGIPILTCDIWEHAYCIDYRNDRASYVKAWWN-LVNWNFANENLKKA 195
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODM_ACIAD (Superoxide dismutase [Mn] OS=Acinetobacter sp. (strain ADP1) GN=sodA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.219e-14 Identity = 56/153 (36.60%), Postives = 69/153 (45.10%), Query Frame = -2 Query: 303 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGL-IERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSS-----LLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETA 743 NN +NH FFW I +DFGS + +FGSGWAWL+ P+ K L V TPN NPL+ D S LL +DVWEHAYYL +QNRR DYI F +V+W V++R A Sbjct: 92 NNGGGHFNHTFFWESLAATNKTGQPSPALVKQITQDFGSLDAFKQKFNEAASGRFGSGWAWLIVT--------------PNGK---LAVTSTPNQDNPLM-DLSETKGTPLLGLDVWEHAYYLKYQNRRADYIKAFW-SVVNWNKVNERYNEA 225
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODM_PSEAE (Superoxide dismutase [Mn] OS=Pseudomonas aeruginosa GN=sodA PE=3 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.592e-14 Identity = 48/152 (31.58%), Postives = 63/152 (41.45%), Query Frame = -2 Query: 297 PAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAKA 752 P NN NH FW I+ G T+FGSGWAWL SLLV + N +PL+ + +L +DVWEHAYYL +QNRRP+YI F + ++ W V++R A A Sbjct: 70 PVVNNGGGHANHSLFWTVMSPQGGGRPDGDLGRAIDEQLGGFEAFKDAFTKAALTRFGSGWAWLSVTPQG-----------------SLLVESSGNQDSPLMNGNTPILGLDVWEHAYYLKYQNRRPEYIGAFYN-VIDWREVARRYAQALA 203
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODM2_STAAB (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=sodM PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.079e-14 Identity = 47/148 (31.76%), Postives = 65/148 (43.92%), Query Frame = -2 Query: 300 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAK 743 NN +NH FW I+ +G+ T FGSGW WLV + L +V TPN NPL + +L DVWEHAYYL +QN+RPDY++ F + +V+W+ V + + AK Sbjct: 73 NNGGGHFNHSLFWEILSPNSEEKGGVIDD--IKAQWGTLDEFKNEFANKATTLFGSGWTWLVVN------------------NGKLEIVTTPNQDNPLTEGKTPILLFDVWEHAYYLKYQNKRPDYMTAFWN-IVNWKKVDELYQAAK 199
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODF_PORGI (Superoxide dismutase [Mn/Fe] OS=Porphyromonas gingivalis GN=sodB PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 2.079e-14 Identity = 47/144 (32.64%), Postives = 62/144 (43.06%), Query Frame = -2 Query: 315 FNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 746 FNNA Q NH+ ++ I++ FGS T FGSGW WL S+ + L + K PNA NP+ + LL DVWEHAYYL +QNRR D++ +V W+ V R Sbjct: 65 FNNAGQTLNHNLYFTQFRPGKGGAPKGKLGEAIDKQFGSFEKFKEEFNTAGTTLFGSGWVWLA-----------------SDANGKLSIEKEPNAGNPVRKGLNPLLGFDVWEHAYYLTYQNRRADHLKDLW-SIVDWDIVESR 190
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODM_BORBU (Superoxide dismutase [Fe] OS=Borrelia burgdorferi GN=sod PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.032e-13 Identity = 48/142 (33.80%), Postives = 61/142 (42.96%), Query Frame = -2 Query: 318 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSK 743 NNA NH ++ I FGS FGSGWAWLV + L V+ PN +PL+ Y +L IDVWEHAYYL +QNRR +Y+ F+ K ++WE VSK Sbjct: 73 NNAGGYSNHTLYFRTLRPGNKDNLFEKFKDDINAAFGSLDVLKANLKDTAMKIFGSGWAWLVLCP-----------------ESGLKVISMPNQDSPLMNSYKPILGIDVWEHAYYLKYQNRRIEYVDAFL-KALNWEEVSK 196
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODM_LACLM (Superoxide dismutase [Mn] OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=sodA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.299e-13 Identity = 49/151 (32.45%), Postives = 65/151 (43.05%), Query Frame = -2 Query: 300 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGL---IERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAK 743 NN NH FW + I ++FGS +FGSGWAWLV ++ L VV T N NP+ + +L +DVWEHAYYL + N RPDYI F + LV+W+ V++ AK Sbjct: 74 NNGGGHLNHSQFWLWLRPNTDGSENHADGEIGDAIAKEFGSFETFKTEFKAAATGRFGSGWAWLVV-----------------DEAGKLKVVSTANQDNPISEGLTPVLGLDVWEHAYYLKYHNVRPDYIEAFFN-LVNWDKVNELYAKAK 206
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODM_LACLA (Superoxide dismutase [Mn] OS=Lactococcus lactis subsp. lactis GN=sodA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.299e-13 Identity = 49/151 (32.45%), Postives = 65/151 (43.05%), Query Frame = -2 Query: 300 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGL---IERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLETAK 743 NN NH FW + I ++FGS +FGSGWAWLV ++ L VV T N NP+ + +L +DVWEHAYYL + N RPDYI F + LV+W+ V++ AK Sbjct: 74 NNGGGHLNHSQFWLWLRPNTDGSENHADGEIGDAIAKEFGSFETFKTEFKAAATGRFGSGWAWLVV-----------------DEAGKLKVVSTANQDNPISEGLTPVLGLDVWEHAYYLKYHNVRPDYIEAFFN-LVNWDKVNELYAKAK 206
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODM_THET8 (Superoxide dismutase [Mn] OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=sodA PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 5.122e-13 Identity = 42/138 (30.43%), Postives = 59/138 (42.75%), Query Frame = -2 Query: 330 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWE 743 NN NH FW I+ FG +FGSGWAWLV + L V+ TPN NP++ ++ ++ IDVWEHAYYL +QNRR DY+ + +++W+ Sbjct: 76 NNGGGHLNHSLFWRLLTPGGAKEPVGELKKAIDEQFGGFQALKEKLTQAAMGRFGSGWAWLV-----------------KDPFGKLHVLSTPNQDNPVMEGFTPIVGIDVWEHAYYLKYQNRRADYLQAIWN-VLNWD 195
BLAST of CN185644 vs. ExPASy Swiss-Prot
Match: SODM_THET2 (Superoxide dismutase [Mn] OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=sodA PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 5.122e-13 Identity = 42/138 (30.43%), Postives = 59/138 (42.75%), Query Frame = -2 Query: 330 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSSLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWE 743 NN NH FW I+ FG +FGSGWAWLV + L V+ TPN NP++ ++ ++ IDVWEHAYYL +QNRR DY+ + +++W+ Sbjct: 76 NNGGGHLNHSLFWRLLTPGGAKEPVGELKKAIDEQFGGFQALKEKLTQAAMGRFGSGWAWLV-----------------KDPFGKLHVLSTPNQDNPVMEGFTPIVGIDVWEHAYYLKYQNRRADYLQAIWN-VLNWD 195 The following BLAST results are available for this feature:
BLAST of CN185644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185644 ID=CN185644; Name=CN185644; organism=Citrus sinensis; type=EST; length=807bpback to top |