CN185641
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185641 vs. ExPASy Swiss-Prot
Match: RN181_DANRE (E3 ubiquitin-protein ligase rnf181 OS=Danio rerio GN=rnf181 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14 Identity = 45/120 (37.50%), Postives = 64/120 (53.33%), Query Frame = 2 Query: 317 LVNPLNQGMVVIEGTSSLETLLRNFVGKDGQPPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKMPVE--EEESGYKRYERR 670 L L QG+ + G+ L + PPA+KA V+++P + + + + G +C VCL E+E E REMPCKH FH CI WL SCP+CR ++P + + E K ERR Sbjct: 27 LARSLMQGLDIDSGSFDLSDWDQRL-----PPPAAKAVVQSLPVVIISPEQADK-GVKCPVCLLEFEEQESVREMPCKHLFHTGCILPWLNKTNSCPLCRLELPTDNADYEEFKKDKERR 140
BLAST of CN185641 vs. ExPASy Swiss-Prot
Match: RN181_BOVIN (E3 ubiquitin-protein ligase RNF181 OS=Bos taurus GN=RNF181 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14 Identity = 37/86 (43.02%), Postives = 55/86 (63.95%), Query Frame = 2 Query: 410 PPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKMPVEEEESGYKRYER 667 PPA+K +VE +P + S+ E +C VCL E+E E A EMPC H FH+NCI WL SCP+CR+++P +++ Y+ ++R Sbjct: 52 PPAAKTAVENLPRTVIRGSQAEL---KCPVCLLEFEEEETAIEMPCHHLFHSNCILPWLSKTNSCPLCRHELPTDDDT--YEEHKR 132
BLAST of CN185641 vs. ExPASy Swiss-Prot
Match: RN181_RAT (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.094e-14 Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 2 Query: 410 PPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKMPVEEE 640 PPA+KA VE++P + S+ E +C VCL E+E E EMPC H FH+NCI WL SCP+CR+++P +++ Sbjct: 64 PPAAKAVVESLPRTVIRSSKAEL---KCPVCLLEFEEEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHELPTDDD 137
BLAST of CN185641 vs. ExPASy Swiss-Prot
Match: RN115_MOUSE (RING finger protein 115 OS=Mus musculus GN=Rnf115 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.735e-14 Identity = 36/97 (37.11%), Postives = 58/97 (59.79%), Query Frame = 2 Query: 356 GTSSLETLLRNFVGK---DGQPPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKMPVEE 637 G + L+ ++ +G+ G PPA K + ++P++ V + E+ G EC VC E+Y V E R++PC H FH++CI WL + +CPVCR + E+ Sbjct: 182 GQTGLDAIVTQLLGQLENTGPPPADKEKITSLPTVTVTQ-EQVNTGLECPVCKEDYTVEEKVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGED 277
BLAST of CN185641 vs. ExPASy Swiss-Prot
Match: PJA1_MOUSE (E3 ubiquitin-protein ligase Praja1 OS=Mus musculus GN=Pja1 PE=1 SV=3) HSP 1 Score: 78.9518 bits (193), Expect = 2.735e-14 Identity = 38/75 (50.67%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 410 PPASKASVEAMPSIKVGESEEEALGGE--CVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKMP 628 PPASK S++A+P I V E + A+G E C +C EY GEVA E+PC H FH C+ WL G+CPVCR P Sbjct: 502 PPASKESIDALPEILVTE-DHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFP 575
BLAST of CN185641 vs. ExPASy Swiss-Prot
Match: PJA1_HUMAN (E3 ubiquitin-protein ligase Praja1 OS=Homo sapiens GN=PJA1 PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.735e-14 Identity = 38/75 (50.67%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 410 PPASKASVEAMPSIKVGESEEEALGGE--CVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKMP 628 PPASK S++A+P I V E + A+G E C +C EY GEVA E+PC H FH C+ WL G+CPVCR P Sbjct: 567 PPASKESIDALPEILVTE-DHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFP 640
BLAST of CN185641 vs. ExPASy Swiss-Prot
Match: RN181_MOUSE (E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.572e-14 Identity = 33/77 (42.86%), Postives = 50/77 (64.94%), Query Frame = 2 Query: 410 PPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKMPVEEE 640 PPA+KA VE++P + ++ + +C VCL E+E E EMPC H FH+NCI WL SCP+CR+++P +++ Sbjct: 64 PPAAKAVVESLPRTVISSAKADL---KCPVCLLEFEAEETVIEMPCHHLFHSNCILPWLSKTNSCPLCRHELPTDDD 137
BLAST of CN185641 vs. ExPASy Swiss-Prot
Match: RN181_HUMAN (E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens GN=RNF181 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.665e-14 Identity = 37/86 (43.02%), Postives = 53/86 (61.63%), Query Frame = 2 Query: 410 PPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKMPVEEEESGYKRYER 667 PPA+K VE +P + S+ E +C VCL E+E E A EMPC H FH++CI WL SCP+CRY++P +++ Y+ + R Sbjct: 52 PPAAKTVVENLPRTVIRGSQAEL---KCPVCLLEFEEEETAIEMPCHHLFHSSCILPWLSKTNSCPLCRYELPTDDDT--YEEHRR 132
BLAST of CN185641 vs. ExPASy Swiss-Prot
Match: RNF44_RAT (RING finger protein 44 OS=Rattus norvegicus GN=Rnf44 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.703e-12 Identity = 26/66 (39.39%), Postives = 42/66 (63.64%), Query Frame = 2 Query: 419 SKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCR 616 +KA +E +PS + ++ CVVC ++EV ++ R +PC H+FHA C++KWL +CP+CR Sbjct: 274 TKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 339
BLAST of CN185641 vs. ExPASy Swiss-Prot
Match: RNF44_MOUSE (RING finger protein 44 OS=Mus musculus GN=Rnf44 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.703e-12 Identity = 26/66 (39.39%), Postives = 42/66 (63.64%), Query Frame = 2 Query: 419 SKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCR 616 +KA +E +PS + ++ CVVC ++EV ++ R +PC H+FHA C++KWL +CP+CR Sbjct: 331 TKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 396 The following BLAST results are available for this feature:
BLAST of CN185641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185641 ID=CN185641; Name=CN185641; organism=Citrus sinensis; type=EST; length=692bpback to top |