CN185621

Overview
NameCN185621
Unique NameCN185621
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185621 vs. ExPASy Swiss-Prot
Match: SIK3_HUMAN (Serine/threonine-protein kinase SIK3 OS=Homo sapiens GN=SIK3 PE=1 SV=3)

HSP 1 Score: 192.586 bits (488), Expect = 2.057e-48
Identity = 100/213 (46.95%), Postives = 139/213 (65.26%), Query Frame = 1
Query:  142 ALFGKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAK-IAKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNL 774
            A  G YE+ + +G G FA V  A  ++    VA+K+I+K ++   NL   I RE+ IM+ L HPHI++LY+V+ T+  IY V E+  GGE+F   +A GR +E  +R+ F+Q+++AV +CH R + HRDLK ENLLLD N N+K++DFG S     + T G LL T CG+P Y APE+   K YDG KVD+WS GV+L+VL  G LPF+   L
Sbjct:    3 ARIGYYEIDRTIGKGNFAVVKRATHLVTKAKVAIKIIDKTQLDEENL-KKIFREVQIMKMLCHPHIIRLYQVMETERMIYLVTEYASGGEIFDHLVAHGRMAEKEARRKFKQIVTAVYFCHCRNIVHRDLKAENLLLDANLNIKIADFGFS----NLFTPGQLLKTWCGSPPYAAPELFEGKEYDGPKVDIWSLGVVLYVLVCGALPFDGSTL 210          
BLAST of CN185621 vs. ExPASy Swiss-Prot
Match: SIK2_HUMAN (Serine/threonine-protein kinase SIK2 OS=Homo sapiens GN=SIK2 PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.057e-48
Identity = 100/224 (44.64%), Postives = 145/224 (64.73%), Query Frame = 1
Query:  109 VSENPR-AQAANALFGKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNL 774
            +++ PR  Q      G Y++   LG G FA V   R  +    VA+K+I+K+++ + NL   I RE+ IM+ L+HPHI+KLY+V+ TKS +Y V E+ K GE+F  +A  GR +E  +R+ F Q++SAV YCH R + HRDLK ENLLLD N N+K++DFG     +  ++  LL T CG+P Y APE+   + Y+G ++D+WS GV+L+VL  G LPF+ P L
Sbjct:    3 MADGPRHLQRGPVRVGFYDIEGTLGKGNFAVVKLGRHRITKTEVAIKIIDKSQLDAVNL-EKIYREVQIMKMLDHPHIIKLYQVMETKSMLYLVTEYAKNGEIFDYLANHGRLNESEARRKFWQILSAVDYCHGRKIVHRDLKAENLLLDNNMNIKIADFGFG---NFFKSGELLATWCGSPPYAAPEVFEGQQYEGPQLDIWSMGVVLYVLVCGALPFDGPTL 222          
BLAST of CN185621 vs. ExPASy Swiss-Prot
Match: NUAK1_HUMAN (NUAK family SNF1-like kinase 1 OS=Homo sapiens GN=NUAK1 PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.057e-48
Identity = 100/224 (44.64%), Postives = 143/224 (63.84%), Query Frame = 1
Query:   94 IERHNVSENPRAQAANALFGKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIA-KGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFN 762
            ++RH+   N        L  +YEL + LG G + KV  A +  +GR VA+K I K+KI     + +I+REI IM  LNHPHI+ +YEV   K KI  +ME+   GEL+  I+ + R SE  +R +F+Q++SAV YCH  GV HRDLK EN+LLD+N N+K++DFGLS   +  + D  L T CG+P Y +PEI++ + Y G +VD W+ GV+L+ L  G +PF+
Sbjct:   42 VKRHHHKHN--------LKHRYELQETLGKGTYGKVKRATERFSGRVVAIKSIRKDKIKDEQDMVHIRREIEIMSSLNHPHIISIYEVFENKDKIVIIMEYASKGELYDYISERRRLSERETRHFFRQIVSAVHYCHKNGVVHRDLKLENILLDDNCNIKIADFGLS---NLYQKDKFLQTFCGSPLYASPEIVNGRPYRGPEVDSWALGVLLYTLVYGTMPFD 254          
BLAST of CN185621 vs. ExPASy Swiss-Prot
Match: SIK3_DANRE (Serine/threonine-protein kinase SIK3 homolog OS=Danio rerio GN=zgc:66101 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.509e-48
Identity = 101/228 (44.30%), Postives = 142/228 (62.28%), Query Frame = 1
Query:  103 HNVSENPRAQAAN---ALFGKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAK-IAKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNL 774
            H V+    A A     A  G YE+ + +G G FA V  A  ++    VA+K+++K ++   NL   I RE+ IM+ L HPHI++LY+V+ T+  IY V E+  GGE+F   +A GR +E  +R+ F+Q+++AV +CH R + HRDLK ENLLLD N N+K++DFG S   +      LL T CG+P Y APE+   K YDG KVD+WS GV+L+VL  G LPF+   L
Sbjct:   38 HPVAHRSAAAACRPPLARVGYYEMERTIGKGNFAVVKLATHMITKAKVAIKIVDKTQLDDENL-KKIFREVQIMKMLRHPHIIRLYQVMETERMIYLVTEYASGGEIFDHLVAHGRMAEKDARRKFKQIVAAVYFCHCRSIVHRDLKAENLLLDHNLNIKIADFGFS---NLFSRGQLLKTWCGSPPYAAPELFEGKEYDGPKVDIWSLGVVLYVLVCGALPFDGSTL 261          
BLAST of CN185621 vs. ExPASy Swiss-Prot
Match: NUAK1_MOUSE (NUAK family SNF1-like kinase 1 OS=Mus musculus GN=Nuak1 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.985e-48
Identity = 100/224 (44.64%), Postives = 143/224 (63.84%), Query Frame = 1
Query:   94 IERHNVSENPRAQAANALFGKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIA-KGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFN 762
            ++RH+   N        L  +YEL + LG G + KV  A +  +GR VA+K I K+KI     + +I+REI IM  LNHPHI+ +YEV   K KI  +ME+   GEL+  I+ + R SE  +R +F+Q++SAV YCH  GV HRDLK EN+LLD+N N+K++DFGLS   +  + D  L T CG+P Y +PEI++ + Y G +VD W+ GV+L+ L  G +PF+
Sbjct:   43 VKRHHHKHN--------LKHRYELQETLGKGTYGKVKRATERFSGRVVAIKSIRKDKIKDELDMVHIRREIEIMSSLNHPHIISIYEVFENKDKIVIIMEYASKGELYDYISERRRLSERETRHFFRQIVSAVHYCHKNGVVHRDLKLENILLDDNCNIKIADFGLS---NLYQKDKFLQTFCGSPLYASPEIVNGRPYRGPEVDSWALGVLLYTLIYGTMPFD 255          
BLAST of CN185621 vs. ExPASy Swiss-Prot
Match: RKIN1_SECCE (Carbon catabolite-derepressing protein kinase OS=Secale cereale GN=RKIN1 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.021e-47
Identity = 101/210 (48.10%), Postives = 135/210 (64.29%), Query Frame = 1
Query:  157 YELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRR---LNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIA-KGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNL 774
            Y LGK+LG G FAKV  A        VA+KV+N+ ++ +  +    KREI I+R    L HPHI+++YEV+ T   I+ VME+ + G+L   I  K R  ED +R+ FQQ+ISAV YCH   V HRDLKPENLLLD   N+K++DFGLS V   +     L T CG+  Y APE++S K Y G ++D+WSCGVIL+ L  G +PF+D N+
Sbjct:   14 YYLGKILGVGTFAKVIIAEHKHTRHKVAIKVLNRRQMRAPEMEEKAKREIKILRLFIDLIHPHIIRVYEVIVTPKDIFVVMEYCQNGDLLDYILEKRRLQEDEARRTFQQIISAVEYCHRNKVVHRDLKPENLLLDSKYNVKLADFGLSNV---MHDGHFLKTSCGSLNYAAPEVISGKLYAGPEIDVWSCGVILYALLCGAVPFDDDNI 220          
BLAST of CN185621 vs. ExPASy Swiss-Prot
Match: SIK1_RAT (Serine/threonine-protein kinase SIK1 OS=Rattus norvegicus GN=Sik1 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.333e-47
Identity = 98/209 (46.89%), Postives = 139/209 (66.51%), Query Frame = 1
Query:  151 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKI-AKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNL 774
            G Y++ + LG G FA V  AR  +    VA+K+I+K ++ SSNL   I RE+ +M+ LNHP+I+KLY+V+ TK  +Y V EF K GE+F  + + G  SE+ +RK F Q++SAV YCH+  + HRDLK ENLLLD N ++K++DFG     +  +    L T CG+P Y APE+   K Y+G ++D+WS GV+L+VL  G LPF+ PNL
Sbjct:   25 GFYDVERTLGKGNFAVVKLARHRVTKTQVAIKIIDKTRLDSSNL-EKIYREVQLMKLLNHPNIIKLYQVMETKDMLYIVTEFAKNGEMFDYLTSNGHLSENEARKKFWQILSAVEYCHNHHIVHRDLKTENLLLDGNMDIKLADFGFG---NFYKPGEPLSTWCGSPPYAAPEVFEGKEYEGPQLDIWSLGVVLYVLVCGSLPFDGPNL 229          
BLAST of CN185621 vs. ExPASy Swiss-Prot
Match: MARK3_HUMAN (MAP/microtubule affinity-regulating kinase 3 OS=Homo sapiens GN=MARK3 PE=1 SV=3)

HSP 1 Score: 189.889 bits (481), Expect = 1.333e-47
Identity = 102/232 (43.97%), Postives = 142/232 (61.21%), Query Frame = 1
Query:  151 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAK-IAKGRFSEDLSRKYFQQ-----------------------LISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNL 774
            G Y L K +G G FAKV  AR +L GR VA+K+I+K ++  ++L   + RE+ IM+ LNHP+IVKL+EV+ T+  +Y +ME+  GGE+F   +A GR  E  +R  F+Q                       ++SAV YCH + + HRDLK ENLLLD + N+K++DFG S   ++    G L T CG+P Y APE+   K YDG +VD+WS GVIL+ L +G LPF+  NL
Sbjct:   54 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSL-QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQGCQAGQTIKVQVSFDLLSLMFTFIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS---NEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 281          
BLAST of CN185621 vs. ExPASy Swiss-Prot
Match: MELK_HUMAN (Maternal embryonic leucine zipper kinase OS=Homo sapiens GN=MELK PE=1 SV=3)

HSP 1 Score: 189.119 bits (479), Expect = 2.274e-47
Identity = 100/207 (48.31%), Postives = 138/207 (66.67%), Query Frame = 1
Query:  157 YELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKI-AKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNL 774
            YEL + +G G FAKV  A  +L G  VA+K+++KN + S   +  IK EI  ++ L H HI +LY VL T +KI+ V+E+  GGELF  I ++ R SE+ +R  F+Q++SAV Y HS+G  HRDLKPENLL DE   LK+ DFGL A K +   D  L T CG+ AY APE++  K Y G++ D+WS G++L+VL  G+LPF+D N+
Sbjct:   11 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSD--LPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV 214          
BLAST of CN185621 vs. ExPASy Swiss-Prot
Match: SIK2_PONAB (Serine/threonine-protein kinase SIK2 OS=Pongo abelii GN=SIK2 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.515e-46
Identity = 98/224 (43.75%), Postives = 143/224 (63.84%), Query Frame = 1
Query:  109 VSENPR-AQAANALFGKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNL 774
            +++ PR  Q      G Y++   LG G FA V   R  +    VA+K+I+K+++ + NL   I RE+ IM+ L+HPHI+KLY+V+ TKS +Y V E+ K GE+F  +A  GR +E  +R+ F Q++SAV YCH R + HRDLK ENLLLD N N+K++DF      +  ++  LL T  G+P Y APE+   + Y+G ++D+WS GV+L+VL  G LPF+ P L
Sbjct:    3 MADGPRHLQRGPVRVGFYDIEGTLGKGNFAVVKLGRHRITKTEVAIKIIDKSQLDAVNL-EKIYREVQIMKMLDHPHIIKLYQVMETKSMLYLVTEYAKNGEIFDYLANHGRLNESEARRKFWQILSAVDYCHGRKIVHRDLKAENLLLDNNMNIKIADFSFG---NFFKSGELLATWRGSPPYAAPEVFEGQQYEGPQLDIWSMGVVLYVLVCGALPFDGPTL 222          
The following BLAST results are available for this feature:
BLAST of CN185621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SIK3_HUMAN2.057e-4846.95Serine/threonine-protein kinase SIK3 OS=Homo sapie... [more]
SIK2_HUMAN2.057e-4844.64Serine/threonine-protein kinase SIK2 OS=Homo sapie... [more]
NUAK1_HUMAN2.057e-4844.64NUAK family SNF1-like kinase 1 OS=Homo sapiens GN=... [more]
SIK3_DANRE3.509e-4844.30Serine/threonine-protein kinase SIK3 homolog OS=Da... [more]
NUAK1_MOUSE5.985e-4844.64NUAK family SNF1-like kinase 1 OS=Mus musculus GN=... [more]
RKIN1_SECCE1.021e-4748.10Carbon catabolite-derepressing protein kinase OS=S... [more]
SIK1_RAT1.333e-4746.89Serine/threonine-protein kinase SIK1 OS=Rattus nor... [more]
MARK3_HUMAN1.333e-4743.97MAP/microtubule affinity-regulating kinase 3 OS=Ho... [more]
MELK_HUMAN2.274e-4748.31Maternal embryonic leucine zipper kinase OS=Homo s... [more]
SIK2_PONAB2.515e-4643.75Serine/threonine-protein kinase SIK2 OS=Pongo abel... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0001J23_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001J23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185621 ID=CN185621; Name=CN185621; organism=Citrus sinensis; type=EST; length=776bp
GAGGCAGCGGCTTTGATTCAGTGGTTTCATTTTTATTCTTCGTTAGCTTT
GTCATCTTCATCGCCTCAGGTTCGATCTCTGGTTATGTCAGAGATCGAAC
GACACAATGTTTCAGAAAATCCTCGCGCCCAGGCCGCCAATGCCTTGTTC
GGGAAGTACGAGCTGGGCAAGCTCCTGGGCTGCGGGGCCTTTGCTAAAGT
CTATCACGCGCGCGACGTCCTCAACGGACGCAGCGTCGCAGTCAAAGTGA
TTAACAAGAACAAGATCATGTCCTCCAATTTAGTCTCCAACATCAAGCGA
GAAATCTCCATCATGCGCCGTTTGAACCACCCTCACATCGTCAAGCTCTA
CGAGGTCTTAGCCACCAAGTCCAAGATTTACTGCGTCATGGAGTTCGTCA
AAGGCGGCGAGCTCTTCGCGAAGATCGCCAAAGGCCGGTTCAGCGAAGAC
CTTAGCCGCAAGTACTTCCAGCAACTCATATCCGCCGTCGGATATTGCCA
CTCGCGCGGAGTCTTCCACCGCGACTTGAAGCCGGAGAACCTTTTGCTGG
ACGAGAACGGGAATTTAAAAGTCTCGGATTTCGGACTCAGCGCCGTGAAG
GATCAGATTCGTACGGACGGGCTGTTGCACACGCTTTGTGGGACCCCTGC
TTACGTGGCACCGGAGATTTTGTCTAAGAAGGGATACGATGGAGCTAAGG
TCGACTTGTGGTCATGCGGCGTCATTTTGTTCGTATTGACGGCAGGTTAC
CTGCCGTTTAACGATCCGAATTTGAT
back to top