CN185620
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185620 vs. ExPASy Swiss-Prot
Match: UBE2S_DICDI (Ubiquitin-conjugating enzyme E2 S OS=Dictyostelium discoideum GN=ube2s PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.337e-20 Identity = 49/143 (34.27%), Postives = 79/143 (55.24%), Query Frame = 1 Query: 196 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 624 KR++KELK+L + P ED+ + +A + GP+ +PY GG F + D+P PPK F TK+FHPN++ G IC++ LK+ W+ L + +LL+I LL PN + L + + + + Y A+ +T +A Sbjct: 12 KRVVKELKELNSSTLEGITLLPCEEDITNIEAVVTGPAGTPYEGGYFKARLILSSDFPRSPPKANFITKIFHPNVSKKGEICVNTLKKDWTEDLGLKHILLTIKCLLIVPNAESSLNEDASRLLLENYDDYCKHAKLFTSIHA 154
BLAST of CN185620 vs. ExPASy Swiss-Prot
Match: UBC21_CAEEL (Probable ubiquitin-conjugating enzyme E2 21 OS=Caenorhabditis elegans GN=ubc-21 PE=2 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.337e-20 Identity = 50/126 (39.68%), Postives = 74/126 (58.73%), Query Frame = 1 Query: 295 IMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVA---------------FRTKVFHPNINSN-GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 624 I GP +PYAGG F + + P YPF+PPKV F T+++HPNI+S G+ICLDILK++W+ +LT+ VLLS+ ++L P P DP +A + ++ + +TA WT +A Sbjct: 57 IKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDILKDKWTASLTLRTVLLSLQAMLCSPEPSDPQDAVVAKQFINNYPMFTATAVYWTSYFA 182
BLAST of CN185620 vs. ExPASy Swiss-Prot
Match: UBC12_YARLI (NEDD8-conjugating enzyme UBC12 OS=Yarrowia lipolytica GN=UBC12 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.337e-20 Identity = 47/138 (34.06%), Postives = 83/138 (60.14%), Query Frame = 1 Query: 190 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTAR 603 A R+ K+L +L P T + P AED+ +++ T+ P + Y GG F + + P++P +PPKV KV+HPNI+ G++CL+IL+E W P L+++ V++ + L +PN DPL + AH +++ +++ + Sbjct: 25 AQLRVQKDLSELSL-PSTMKTHFPSAEDIMNFELTVR-PDEGFYQGGEFRFSFYVNPNFPHEPPKVKCLQKVYHPNIDLEGNVCLNILREDWKPVLSLNAVMIGLQYLFLEPNASDPLNKDAAHQMTANREEFKRNVK 160
BLAST of CN185620 vs. ExPASy Swiss-Prot
Match: UBC12_DICDI (NEDD8-conjugating enzyme Ubc12 OS=Dictyostelium discoideum GN=ube2m PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.977e-20 Identity = 49/135 (36.30%), Postives = 76/135 (56.30%), Query Frame = 1 Query: 205 LKELKDLQK-DPPTSCSAG-PVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTAR 603 L+ KD+ + + PT C+ D+ ++ +I P+D Y F TI+ P YP+ PPKV T V+HPNI+ G +CL+IL++ W P L I V+ + +L +PNPDDPL + A + +K +E+ R Sbjct: 80 LRAQKDIDEMEVPTGCAVSFKDTNDILNFNLSIT-PTDGLYQSATFQFTINIPSTYPYDPPKVHCDTLVYHPNIDLEGHVCLNILRQDWMPVLNIGTVIFGLMTLFLEPNPDDPLNKDAAQLMIDNKKTFEANVR 213
BLAST of CN185620 vs. ExPASy Swiss-Prot
Match: UBC5_ARATH (Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana GN=UBC5 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 3.889e-20 Identity = 49/137 (35.77%), Postives = 74/137 (54.01%), Query Frame = 1 Query: 220 DLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 624 DL K + + + M + GP DS Y GGV+ + + P YP+K P V F TK++HPN++ +GS+CLD++ + WSP + V + + LL PNP DPL E A + D+ YE + + +KYA Sbjct: 11 DLMKLMMSDYKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVKEYCEKYA 147
BLAST of CN185620 vs. ExPASy Swiss-Prot
Match: UBC4_ARATH (Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana GN=UBC4 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 3.889e-20 Identity = 48/137 (35.04%), Postives = 74/137 (54.01%), Query Frame = 1 Query: 220 DLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 624 D+ K + + + M + GP DS Y GGV+ + + P YP+K P V F TK++HPN++ +GS+CLD++ + WSP + V + + LL PNP DPL E A + D+ YE + + +KYA Sbjct: 11 DMMKLMMSDYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVKEYCEKYA 147
BLAST of CN185620 vs. ExPASy Swiss-Prot
Match: UBC8_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC8 PE=1 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 6.633e-20 Identity = 46/123 (37.40%), Postives = 70/123 (56.91%), Query Frame = 1 Query: 262 VAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVL-LSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 624 + + M + +GP D+PY GV+ + + P +YP+K P + F K+FHPNI+ ++GSICLD++ WSP + ++ I LL +PN DPL E A + DK YE + + KYA Sbjct: 25 INDSMQEFHVKFLGPKDTPYENGVWRLHVELPDNYPYKSPSIGFVNKIFHPNIDIASGSICLDVINSTWSPLYDLINIVEWMIPGLLKEPNGSDPLNNEAATLQLRDKKLYEEKIKEYIDKYA 147
BLAST of CN185620 vs. ExPASy Swiss-Prot
Match: UBC12_CANGA (NEDD8-conjugating enzyme UBC12 OS=Candida glabrata GN=UBC12 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.633e-20 Identity = 50/138 (36.23%), Postives = 75/138 (54.35%), Query Frame = 1 Query: 190 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTAR 603 A R+ K++++L+ P + + I+ P + Y GG F T F YP PPKV K+FHPNI+ +G ICL+IL+E WSPAL + ++L + SL +PN +DPL E A + DK ++ + R Sbjct: 33 AKLRLQKDIEELELPPTVRVNIISLDNHKEMSLNIIIIPDEGFYKGGKFRFTATFLETYPIDPPKVICNNKIFHPNIDPHGKICLNILREDWSPALDLQCIVLGLLSLFQEPNGNDPLNKEAAEVLNKDKLEFGNLVR 170
BLAST of CN185620 vs. ExPASy Swiss-Prot
Match: RCE1_ARATH (NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana GN=RCE1 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.633e-20 Identity = 47/135 (34.81%), Postives = 77/135 (57.04%), Query Frame = 1 Query: 199 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTAR 603 R+ K++ +L S S +D+ +++ +I P D Y G F+ T P YP + PKV +TKV+HPNI+ G++CL+IL+E W P L I+ V+ + L T+PN +DPL + A + + + +E+ R Sbjct: 34 RLHKDISELNLPSSCSISFPNGKDDLMNFEVSIK-PDDGYYHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNSEDPLNHDAAAVLRDNPKLFETNVR 167
BLAST of CN185620 vs. ExPASy Swiss-Prot
Match: UB2L6_BOVIN (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Bos taurus GN=UBE2L6 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.131e-19 Identity = 51/151 (33.77%), Postives = 85/151 (56.29%), Query Frame = 1 Query: 190 ASKRILKELKDLQKDPP----TSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAM 627 ASKR+ KEL+DLQK+ P CS +++ W A ++ P PY F + I FP +YPF+PP V F T+++HPN++ +G +CL I+ K+ W + +VL ++ L+ P P P+ E+A D ++ A+ +T ++ + Sbjct: 3 ASKRVAKELEDLQKELPKYLRNLCSE---EDNVLVWHALLL-PERPPYNLKAFRLCISFPREYPFQPPTVKFTTRIYHPNVDRDGRVCLPIISKKNWKASTRTCQVLEALNMLVNQPEPGQPVRLELAEQLTQDPELFDQMAQEFTLQFGV 149 The following BLAST results are available for this feature:
BLAST of CN185620 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185620 ID=CN185620; Name=CN185620; organism=Citrus sinensis; type=EST; length=649bpback to top |