CN185620
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185620 vs. ExPASy Swiss-Prot
Match: UBC3_YEAST (Ubiquitin-conjugating enzyme E2-34 kDa OS=Saccharomyces cerevisiae GN=CDC34 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.529e-16 Identity = 49/148 (33.11%), Postives = 74/148 (50.00%), Query Frame = 1 Query: 199 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPS-DSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTAR 603 R +EL D +K P+ ++F W +M + DS Y GG F + FP D+PF PP+ F ++HPN+ +G +C+ IL E WSP T+ VL+SI SLL DPN + P + A Y+ + +Y+ + Sbjct: 14 RQYRELTDPKKAIPSFHIELEDDSNIFTWNIGVMVLNEDSIYHGGFFKAQMRFPEDFPFSPPQFRFTPAIYHPNVYRDGRLCISILHQSGDPMTDEPDAETWSPVQTVESVLISIVSLLEDPNINSPANVDAAVDYRKNPEQYKQRVK 161
BLAST of CN185620 vs. ExPASy Swiss-Prot
Match: UBC16_ARATH (Probable ubiquitin carrier protein E2 16 OS=Arabidopsis thaliana GN=UBC16 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.529e-16 Identity = 43/112 (38.39%), Postives = 67/112 (59.82%), Query Frame = 1 Query: 187 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAF-RTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 519 +A+ R+ KEL + Q +PPT V +++ W ++G + YA + + + FP YP + P+V F HP+I SNG ICLDIL + WSPA+T+S + +SI S+L+ Sbjct: 15 IATNRLQKELVEWQMNPPTGFKH-KVTDNLQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLS 125
BLAST of CN185620 vs. ExPASy Swiss-Prot
Match: UBE2F_DANRE (NEDD8-conjugating enzyme UBE2F OS=Danio rerio GN=ube2f PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.608e-16 Identity = 50/149 (33.56%), Postives = 77/149 (51.68%), Query Frame = 1 Query: 202 ILKELKDLQKDPPTSCSAG-PVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 624 ++KE+ +L+ + P++C P + H+Q I P + Y GG F I P Y PPKV T+++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL + A + DK + + + + + YA Sbjct: 37 LIKEVAELEANLPSTCKVTFPDENKLCHFQLAI-SPDEGYYLGGKFQFEIEVPEAYNMVPPKVKCLTRIWHPNIAETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIDAAEHHLRDKEDFRNKVQDFIKNYA 184
BLAST of CN185620 vs. ExPASy Swiss-Prot
Match: UBE2F_RAT (NEDD8-conjugating enzyme UBE2F OS=Rattus norvegicus GN=Ube2f PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.407e-16 Identity = 49/150 (32.67%), Postives = 72/150 (48.00%), Query Frame = 1 Query: 196 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 624 K ++KE+ +L+ + P +C + H + P + Y GG F P Y PPKV TK++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + DK + + ++YA Sbjct: 35 KLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTVSPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRDKVDEYIKRYA 184
BLAST of CN185620 vs. ExPASy Swiss-Prot
Match: UBC6_SCHPO (Ubiquitin-conjugating enzyme E2 6 OS=Schizosaccharomyces pombe GN=ubc6 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.407e-16 Identity = 43/113 (38.05%), Postives = 62/113 (54.87%), Query Frame = 1 Query: 190 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLT 519 A KR++KE LQK+P A P E++ W I GP D+PY GG + T+ FPPDYPFKPP + T +N +CL D + W+P+ +S +L+ + S +T Sbjct: 6 AYKRLMKEYLALQKNPVELVDAKPATENILEWHYIITGPPDTPYEGGQYHGTLIFPPDYPFKPPAIRMITP--SGRFQTNTRLCLSFSDFHPKSWNPSWMVSTILVGLVSFMT 116
BLAST of CN185620 vs. ExPASy Swiss-Prot
Match: UB2FA_MOUSE (NEDD8-conjugating enzyme UBE2F OS=Mus musculus GN=Ube2f PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.407e-16 Identity = 49/150 (32.67%), Postives = 72/150 (48.00%), Query Frame = 1 Query: 196 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 624 K ++KE+ +L+ + P +C + H + P + Y GG F P Y PPKV TK++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + DK + + ++YA Sbjct: 35 KLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTVSPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRDKVDEYIKRYA 184
BLAST of CN185620 vs. ExPASy Swiss-Prot
Match: UBE2F_HUMAN (NEDD8-conjugating enzyme UBE2F OS=Homo sapiens GN=UBE2F PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.449e-16 Identity = 49/150 (32.67%), Postives = 73/150 (48.67%), Query Frame = 1 Query: 196 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 624 K ++KE+ +L+ + P +C + H + P + Y GG F P Y PPKV TK++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + DK + + + ++YA Sbjct: 35 KLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTVTPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKRYA 184
BLAST of CN185620 vs. ExPASy Swiss-Prot
Match: UBC18_ARATH (Probable ubiquitin carrier protein E2 18 OS=Arabidopsis thaliana GN=UBC18 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.811e-16 Identity = 44/112 (39.29%), Postives = 65/112 (58.04%), Query Frame = 1 Query: 187 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV-FHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 519 +A R+ KEL + Q +PPT V +++ W + G + YA + + + FP YP + P+V F HP+I SNG ICLDIL + WSPA+T+S V +SI S+L+ Sbjct: 15 IACNRLQKELSEWQVNPPTGFKHR-VTDNLQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLS 125
BLAST of CN185620 vs. ExPASy Swiss-Prot
Match: UBC15_ARATH (Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana GN=UBC15 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 5.811e-16 Identity = 43/112 (38.39%), Postives = 66/112 (58.93%), Query Frame = 1 Query: 187 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKV-FHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 519 +A R+ KEL + Q +PPT V +++ W + G + YA + + + FP YP + P+V F + HP+I SNG ICLDIL + WSPA+T++ V +SI S+L+ Sbjct: 15 IACNRLQKELSEWQLNPPTGFRH-KVTDNLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISILSMLS 125
BLAST of CN185620 vs. ExPASy Swiss-Prot
Match: UBE2F_BOVIN (NEDD8-conjugating enzyme UBE2F OS=Bos taurus GN=UBE2F PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.589e-16 Identity = 51/156 (32.69%), Postives = 75/156 (48.08%), Query Frame = 1 Query: 181 RVMASKRIL-KELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 624 RV R+L KE+ +L+ + P +C + H + P + Y GG F P Y PPKV T+++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + DK + + + ++YA Sbjct: 29 RVSVRDRLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTVTPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVEDYIKRYA 184 The following BLAST results are available for this feature:
BLAST of CN185620 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185620 ID=CN185620; Name=CN185620; organism=Citrus sinensis; type=EST; length=649bpback to top |