CN185620
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185620 vs. ExPASy Swiss-Prot
Match: UBE2W_MOUSE (Probable ubiquitin-conjugating enzyme E2 W OS=Mus musculus GN=Ube2w PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.441e-14 Identity = 45/112 (40.18%), Postives = 59/112 (52.68%), Query Frame = 1 Query: 196 KRILKELKDLQKDPPTSCSAGP--VAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTK--VFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 519 KR+ KEL LQ DPP + V + W + G + Y G F + F YPF P+V F + HP++ SNG ICL IL E WSPAL++ V LSI S+L+ Sbjct: 6 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPIHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLS 117
BLAST of CN185620 vs. ExPASy Swiss-Prot
Match: UBE2W_HUMAN (Probable ubiquitin-conjugating enzyme E2 W OS=Homo sapiens GN=UBE2W PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.189e-14 Identity = 45/112 (40.18%), Postives = 59/112 (52.68%), Query Frame = 1 Query: 196 KRILKELKDLQKDPPTSCSAGP--VAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVF--HPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 519 KR+ KEL LQ DPP + V + W + G + Y G F + F YPF P+V F + HP++ SNG ICL IL E WSPAL++ V LSI S+L+ Sbjct: 6 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLS 117
BLAST of CN185620 vs. ExPASy Swiss-Prot
Match: UBC6_YEAST (Ubiquitin-conjugating enzyme E2 6 OS=Saccharomyces cerevisiae GN=UBC6 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.277e-14 Identity = 41/131 (31.30%), Postives = 65/131 (49.62%), Query Frame = 1 Query: 190 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKS 573 A KR+ KE K + ++PP A P +++ W I GP+D+PY GG + T+ FP DYP+KPP + T + N +CL D + W+P ++S +L + S +T + H K+ Sbjct: 6 AHKRLTKEYKLMVENPPPYILARPNEDNILEWHYIITGPADTPYKGGQYHGTLTFPSDYPYKPPAIRMITP--NGRFKPNTRLCLSMSDYHPDTWNPGWSVSTILNGLLSFMTSDEATTGSITTSDHQKKT 134
BLAST of CN185620 vs. ExPASy Swiss-Prot
Match: UBC6_CANGA (Ubiquitin-conjugating enzyme E2 6 OS=Candida glabrata GN=UBC6 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.277e-14 Identity = 39/113 (34.51%), Postives = 60/113 (53.10%), Query Frame = 1 Query: 190 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLT 519 A KR+ KE K + ++PP A P E++ W I GP D+PY GG + T+ FP DYP+KPP + T + N +CL D + W+P +++ +L + S +T Sbjct: 6 AQKRLTKEYKMMVENPPPFIIARPNEENILEWHYVISGPPDTPYDGGQYHGTLTFPSDYPYKPPAIRMITP--NGRFKENTRLCLSMSDYHPDTWNPGWSVATILNGLLSFMT 116
BLAST of CN185620 vs. ExPASy Swiss-Prot
Match: UBC34_ARATH (Ubiquitin carrier protein E2 34 OS=Arabidopsis thaliana GN=UBC34 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.582e-13 Identity = 38/115 (33.04%), Postives = 59/115 (51.30%), Query Frame = 1 Query: 196 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNP 531 KR+ KE + L K+P + A P D+ W + G +P+AGG + I FPP+YP+KPP + T + + ICL D E W+P ++S +L + S + D +P Sbjct: 8 KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITMTTP--NGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSP 120
BLAST of CN185620 vs. ExPASy Swiss-Prot
Match: UBC6_KLULA (Ubiquitin-conjugating enzyme E2 6 OS=Kluyveromyces lactis GN=UBC6 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.067e-13 Identity = 38/115 (33.04%), Postives = 59/115 (51.30%), Query Frame = 1 Query: 184 VMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLT 519 + A+KR+ KE K++ +PP A P +++ W I GP +PY G + T+ FP DYPF PP + T + N +CL D E W+PA ++ +L + S +T Sbjct: 4 IQANKRLTKEYKNIVNNPPPFIIAAPHEDNILEWHYVITGPPSTPYENGQYHGTLTFPSDYPFNPPAIRMITP--NGRFKENTRLCLSMSDYHPEAWNPAWSVVTILNGLLSFMT 116
BLAST of CN185620 vs. ExPASy Swiss-Prot
Match: UBC33_ARATH (Probable ubiquitin carrier protein E2 33 OS=Arabidopsis thaliana GN=UBC33 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.699e-13 Identity = 38/115 (33.04%), Postives = 59/115 (51.30%), Query Frame = 1 Query: 196 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNP 531 KR+ KE + L K+P + A P D+ W + G +P+AGG + I FPP+YP+KPP + T + + ICL D E W+P ++S +L + S + D +P Sbjct: 8 KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITMTTP--NGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 120
BLAST of CN185620 vs. ExPASy Swiss-Prot
Match: Y1A1_ENCCU (Probable ubiquitin-conjugating enzyme E2 ECU01_1010 OS=Encephalitozoon cuniculi GN=ECU01_1010 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.013e-13 Identity = 36/116 (31.03%), Postives = 57/116 (49.14%), Query Frame = 1 Query: 283 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL--------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY 588 W DS YAG + + FP YP +PP + F +K+FHPNI +G +C+ IL K++W+P I +++SI +L PN P + + MY+ + +Y Sbjct: 68 WDIYFTLGGDSLYAGRILKAVMKFPSSYPLRPPTLKFVSKMFHPNIYEDGKMCISILEEDKQQDSSVFGDPKDKWTPVQNIRTIVMSIVVILNSPNISSPANVDASVMYRDNPEEY 183
BLAST of CN185620 vs. ExPASy Swiss-Prot
Match: UB2J1_MOUSE (Ubiquitin-conjugating enzyme E2 J1 OS=Mus musculus GN=Ube2j1 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.340e-12 Identity = 41/112 (36.61%), Postives = 58/112 (51.79%), Query Frame = 1 Query: 190 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL---KEQWSPALTISKVLLSICSLL 516 A KR++KE +L KDP A P+ +++F W T+ GP DS + GGV+ I PP+YP KPP + T + ICL I E W P+ +I LL+I + Sbjct: 11 AVKRLMKEAAEL-KDPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTA--NGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFM 119
BLAST of CN185620 vs. ExPASy Swiss-Prot
Match: UB2J1_HUMAN (Ubiquitin-conjugating enzyme E2 J1 OS=Homo sapiens GN=UBE2J1 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.340e-12 Identity = 41/112 (36.61%), Postives = 58/112 (51.79%), Query Frame = 1 Query: 190 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL---KEQWSPALTISKVLLSICSLL 516 A KR++KE +L KDP A P+ +++F W T+ GP DS + GGV+ I PP+YP KPP + T + ICL I E W P+ +I LL+I + Sbjct: 11 AVKRLMKEAAEL-KDPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTA--NGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFM 119 The following BLAST results are available for this feature:
BLAST of CN185620 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185620 ID=CN185620; Name=CN185620; organism=Citrus sinensis; type=EST; length=649bpback to top |