CN185603

Overview
NameCN185603
Unique NameCN185603
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.013e-15
Identity = 45/132 (34.09%), Postives = 78/132 (59.09%), Query Frame = -2
Query:  373 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWD--LYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            +SDFGL+KL+  + +HV+T VAGT GY+APEYA+  +V+ KAD+YS+G++L+E++S +   +    + E      +W   +  + +   +  T L      ++    L + L CT D+  +RP+M   V++L
Sbjct:  401 LSDFGLSKLLGTSQSHVTTGVAGTFGYVAPEYAMTCRVSEKADVYSYGIVLLELISDKRALDPSFSSHENGFNIVSWAHMMLSQGKAKEVFTTGLWETGPPDDLVEVLHLALKCTVDSLSIRPTMKQAVRLL 532          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.323e-15
Identity = 47/131 (35.88%), Postives = 78/131 (59.54%), Query Frame = -2
Query:  373 ISDFGLAKLIPAN-MTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            ++DFGL++  P +  +HVST VAGT GYL PEY     ++ K+D+YSFGV+L+EIV+ +  T+     E  ++ E    +  + ++  ++D  L GD+D   A + +++ L C   +   RP+M+ VV  L
Sbjct:  706 LADFGLSRSFPVDGESHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVTDK--TRERTHINEWVGSMLTKGDIKSILDPKLMGDYDTNGAWKIVELALACVNPSSNRRPTMAHVVTEL 834          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.323e-15
Identity = 43/131 (32.82%), Postives = 79/131 (60.31%), Query Frame = -2
Query:  373 ISDFGLAKLIPAN-MTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            I+DFGL+K+ P + ++HV T V GT GY+ PEY    ++  K+D+YSFG++L+E+++G+ +       E+  ++       +  ++  +VD  L+GDF +  A +F++V + C +D    RP+ + +V  L
Sbjct:  720 IADFGLSKVFPEDDLSHVVTAVMGTPGYVDPEYYNTFKLNEKSDVYSFGIVLLELITGKRSIMKTDDGEKMNVVHYVEPFLKMGDIDGVVDPRLHGDFSSNSAWKFVEVAMSCVRDRGTNRPNTNQIVSDL 850          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.323e-15
Identity = 49/129 (37.98%), Postives = 74/129 (57.36%), Query Frame = -2
Query:  382 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELIL--LVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVV 762
            ++DFGL+K +     HVST V G+ GYL PEY  R Q+T K+D+YSFGV+L+E +  R   N +LP E+  L E  W +  +++ +L  ++D  L G  + E   +F +    C  D    RP+M  V+
Sbjct:  665 VADFGLSKDVAFGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAINPQLPREQVNLAE--WAMLWKQKGLLEKIIDPHLVGAVNPESMKKFAEAAEKCLADYGVDRPTMGDVL 791          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.323e-15
Identity = 44/126 (34.92%), Postives = 71/126 (56.35%), Query Frame = -2
Query:  385 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTV 762
            +SDFG ++ I  + TH++T VAGT GYL PEY    Q T K+D+YSFGV+LVE+++G    ++  P E + L+    +  ++  ++ +VD+ +      E+     K+   C     K RP+M  V
Sbjct:  562 VSDFGTSRSINVDQTHLTTLVAGTFGYLDPEYFQTSQFTDKSDVYSFGVVLVELITGEKPFSVMRPEENRGLVSHFNEAMKQNRVLDIVDSRIKEGCTLEQVLAVAKLARRCLSLKGKKRPNMREV 687          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.323e-15
Identity = 47/132 (35.61%), Postives = 78/132 (59.09%), Query Frame = -2
Query:  382 ISDFGLAKL--IPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRL---PTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVV 762
            I+DFGL++   +  + + VST VAGT+GYL PEY +  +++ K+D+YSFG+LL+EI+     TN R+     E   + E    + ++ +   +VD  L+G++D     R L+V + C   +   RP+MS V+
Sbjct:  707 IADFGLSRSFQVGGDQSQVSTVVAGTLGYLDPEYYLTSELSEKSDVYSFGILLLEII-----TNQRVIDQTRENPNIAEWVTFVIKKGDTSQIVDPKLHGNYDTHSVWRALEVAMSCANPSSVKRPNMSQVI 833          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.323e-15
Identity = 48/132 (36.36%), Postives = 76/132 (57.58%), Query Frame = -2
Query:  370 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGD-FDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLM 762
            +SDFG+AK IPA+ TH ST V GTIGY+ PEYA   ++  K+DIYSFG++L+E+++G+     +    E  L +      +   ++  VD  +     D     +  ++ LLCT+  P  RP+M  V ++L+
Sbjct:  789 LSDFGIAKSIPASKTHASTYVLGTIGYIDPEYARTSRINEKSDIYSFGIVLLELLTGK-----KAVDNEANLHQLILSKADDNTVMEAVDPEVTVTCMDLGHIRKTFQLALLCTKRNPLERPTMLEVSRVLL 915          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.728e-15
Identity = 53/145 (36.55%), Postives = 83/145 (57.24%), Query Frame = -2
Query:  334 ISDFGLAKLIP--ANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEKDIDDDKITK 762
            ++DFG+AK +          + +AG+ GY+APEYA   +V  K+DIYSFGV+++EIV+ +   +  L   E+ L++      +++ +  ++D  L+  F  EE  + L VGLLCT   P  RPSM  VV+ML      D+D + K
Sbjct:  831 VADFGVAKAVDLTGKAPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILEIVTRKRPVDPEL--GEKDLVKWVCSTLDQKGIEHVIDPKLDSCF-KEEISKILNVGLLCTSPLPINRPSMRRVVKMLQEIGGGDEDSLHK 972          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.257e-15
Identity = 54/155 (34.84%), Postives = 80/155 (51.61%), Query Frame = -2
Query:  316 ISDFGLAKLIPA-NMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML-----MGEKDIDDDKITKPGLISD 762
            ++DFGL+K  P  + THVST V G+ GYL PEY  R Q+T K+D+YSFGV++ E++  R   +  L  E   L E      ++ +L  ++D SL G    +   +F + G  C  D    RPSM  V+  L     + E  +D D      +I +
Sbjct:  622 VADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVMFEVLCARPVIDPTLTREMVNLAEWAMKWQKKGQLEHIIDPSLRGKIRPDSLRKFGETGEKCLADYGVDRPSMGDVLWNLEYALQLQEAVVDGDPEDSTNMIGE 776          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.257e-15
Identity = 47/132 (35.61%), Postives = 77/132 (58.33%), Query Frame = -2
Query:  370 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGD-FDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLM 762
            +SDFG+AK IPA  T+ ST V GTIGY+ PEYA   ++  K+DIYSFG++L+E+++G+     +    E  L +      +   ++  VD  ++    D+    +  ++ LLCT+  P  RP+M  V ++L+
Sbjct:  792 LSDFGIAKSIPATKTYASTYVLGTIGYIDPEYARTSRLNEKSDIYSFGIVLLELLTGK-----KAVDNEANLHQMILSKADDNTVMEAVDAEVSVTCMDSGHIKKTFQLALLCTKRNPLERPTMQEVSRVLL 918          
The following BLAST results are available for this feature:
BLAST of CN185603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
RPK1_ARATH1.013e-1534.09Probable LRR receptor-like serine/threonine-protei... [more]
Y5188_ARATH1.323e-1535.88Probable LRR receptor-like serine/threonine-protei... [more]
Y4291_ARATH1.323e-1532.82Probable LRR receptor-like serine/threonine-protei... [more]
Y2214_ARATH1.323e-1537.98Probable receptor-like protein kinase At2g21480 OS... [more]
WAKLI_ARATH1.323e-1534.92Wall-associated receptor kinase-like 22 OS=Arabido... [more]
MEE39_ARATH1.323e-1535.61Probable LRR receptor-like serine/threonine-protei... [more]
ERL1_ARATH1.323e-1536.36LRR receptor-like serine/threonine-protein kinase ... [more]
HSL1_ARATH1.728e-1536.55Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
Y5597_ARATH2.257e-1534.84Probable receptor-like protein kinase At5g59700 OS... [more]
ERL2_ARATH2.257e-1535.61LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001J13_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001J13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185603 ID=CN185603; Name=CN185603; organism=Citrus sinensis; type=EST; length=763bp
GAGGAAAACTTCTCCATTTACAAGAAAATACCCAGTAAGTTTTGAAATAC
CAAATGAATACAAGATTGCAAAATCTACAAGGGACAACAAAGCCTCAAAA
CCCTAAAATGAAGAAATAAATTACTATGATTTGCTTTTAAACCGAATTAA
TGTTCAAGTGCTCCTATCATATGATACTGTAAAGGTCATAGTAGCAGCAC
TCGTGGCTGCCGATGACAAATTTGAGTTGTCTGGATTGTCCGAGCTATTA
TAAGTTGATGAAGTCGTTGTTTCCAACTTAGGTTTAGGGGGACCTCTTAC
TTTGAGGTCCATGAAATCGGAAATTAATCCTGGCTTTGTTATTTTATCAT
CATCTATGTCTTTCTCACCCATCAGCATCTGGACCACAGTTGACATGGAT
GGCCGGAGCTTTGGAGTGTCTTGAGTGCAGAGAAGACCAACCTTTAGGAA
TCTACAAGCCTCCTCAGCATCAAAATCGCCATTCAATGATGTATCTACCA
GTAGTATCAACTCCCTTCGCTCATATAAATCCCATGTCCGTTCTAGAAGA
TATTGCTCTTCGGTGGGCAATCGCATATTTGTGTTACACCTCCCACTGAC
TATTTCCACAAGGAGTACACCAAAACTGTATATATCTGCTTTCCGTGTCA
CTTGCCCTCTTATTGCATACTCTGGTGCTAGATAACCTATTGTTCCAGCA
ACCCTAGTGCTAACATGAGTCATGTTGGCCGGGATAAGCTTTGCAAGACC
AAAATCTGAAATT
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