CN185603

Overview
NameCN185603
Unique NameCN185603
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.948e-15
Identity = 46/133 (34.59%), Postives = 82/133 (61.65%), Query Frame = -2
Query:  373 ISDFGLAKLI-PANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGR--CNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            ++DFGL+KL+      HV+T+V GT+GYL PEY +  Q+T K+D+Y FGV+++E+++G+   +    +  E +  ++++ +LY+ +EL+       +G+    E  +++ V L C +     RP+MS VVQ L
Sbjct:  774 VADFGLSKLVGDPEKAHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSPIDRGSYVVKEVKKKMDKSRNLYDLQELLDTTIIQNSGNLKGFE--KYVDVALQCVEPEGVNRPTMSEVVQEL 904          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.028e-15
Identity = 46/131 (35.11%), Postives = 75/131 (57.25%), Query Frame = -2
Query:  373 ISDFGLAKLIPANM-THVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            + DFGL++  P    THVST VAG+ GYL PEY     +T K+D++SFGV+L+EI++ +   +     E+ ++ E         ++  +VD S+NGD+D+    + L++ + C   +   RP+MS V   L
Sbjct:  732 LGDFGLSRSFPVGSETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQ--TREKSHIGEWVGFKLTNGDIKNIVDPSMNGDYDSSSLWKALELAMSCVSPSSSGRPNMSQVANEL 860          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.028e-15
Identity = 50/158 (31.65%), Postives = 91/158 (57.59%), Query Frame = -2
Query:  292 ISDFGLAKLIP-ANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEKDIDDDKITKPGLISDFMDLKVRG 762
            ++DFGL++  P  N  +VST VAGT GYL PEY     +T K+DIYSFG++L+EI+S R    ++   E+ +++E    +  + +L  ++D +L+ D+D     + +++ + C   +   RP+MS VV       ++ +  I++   I +  D++ +G
Sbjct:  718 LADFGLSRSFPIGNEKNVSTVVAGTPGYLDPEYYQTNWLTEKSDIYSFGIVLLEIISNR--PIIQQSREKPHIVEWVSFMITKGDLRSIMDPNLHQDYDIGSVWKAIELAMSCVSLSSARRPNMSRVV------NELKECLISETSRIGEGRDMESKG 867          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y1124_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g12460 OS=Arabidopsis thaliana GN=At1g12460 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.028e-15
Identity = 50/134 (37.31%), Postives = 80/134 (59.70%), Query Frame = -2
Query:  373 ISDFGLAKLIPA-NMTHVSTRVAGTIGYLAPEYAIRG-QVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTW--DLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            +SD+GL K +P  +   ++ +    +GY+APE A +  + + K D+YS+GV+L+E+V+GR    +  P+E Q L+ R +  DL E        D  L  +F+  E  + +K+GLLCT + P  RPSM+ VVQ+L
Sbjct:  743 LSDYGLEKFLPVMDSFGLTKKFHNAVGYIAPELAQQSLRASEKCDVYSYGVVLLELVTGR--KPVESPSENQVLILRDYVRDLLETGSASDCFDRRLR-EFEENELIQVMKLGLLCTSENPLKRPSMAEVVQVL 873          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.028e-15
Identity = 48/128 (37.50%), Postives = 74/128 (57.81%), Query Frame = -2
Query:  382 ISDFGLAKLIPA-NMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVV 762
            ++DFGL+K  P+ + THVST V G+ GYL PEY  R Q+T K+D+YSFGV+L+E++  R   N  LP E+  + E      ++  L  ++D++L G  +     +F +    C  +    RPSM  V+
Sbjct:  650 VADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCCRPALNPVLPREQVNIAEWAMAWQKKGLLDQIMDSNLTGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVL 777          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.028e-15
Identity = 45/128 (35.16%), Postives = 75/128 (58.59%), Query Frame = -2
Query:  382 ISDFGLAKLIPAN-MTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVV 762
            ++DFGL++  P    THVST VAGT GYL PEY     +  K+D+YSFG++L+EI++ +   N     E+ ++ E    +  + ++  ++D  L GD+D+    R +++ + C   +   RP+MS VV
Sbjct:  733 LADFGLSRSFPIEGETHVSTVVAGTPGYLDPEYYRTNWLNEKSDVYSFGIVLLEIITNQLVINQ--SREKPHIAEWVGLMLTKGDIQNIMDPKLYGDYDSGSVWRAVELAMSCLNPSSARRPTMSQVV 858          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.567e-15
Identity = 46/128 (35.94%), Postives = 77/128 (60.16%), Query Frame = -2
Query:  382 ISDFGLAK-LIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVV 762
            ++DFGL++  +    THVST VAGT GYL PEY     +T K+D+YSFG+LL+EI++ R   +     E+ ++ E    +  + ++  ++D SLN D+D+    + +++ + C   +   RP+MS VV
Sbjct:  719 LADFGLSRSFLIEGETHVSTVVAGTPGYLDPEYHRTNWLTEKSDVYSFGILLLEIITNRHVIDQ--SREKPHIGEWVGVMLTKGDIQSIMDPSLNEDYDSGSVWKAVELAMSCLNHSSARRPTMSQVV 844          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.567e-15
Identity = 51/137 (37.23%), Postives = 75/137 (54.74%), Query Frame = -2
Query:  370 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVD------TSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLM 762
            + DFGLAK+I   ++   + VAG+ GY+APEYA   +VT K DIYSFGV+L+E+++G+       P E+   L  TW     R+  L  +      T +  D          K+ +LCT+ +P  RP+M  VV ML+
Sbjct:  968 VGDFGLAKVIDMPLSKSVSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTGKAPVQ---PLEQGGDL-ATWTRNHIRDHSLTSEILDPYLTKVEDDVILNHMITVTKIAVLCTKSSPSDRPTMREVVLMLI 1100          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.567e-15
Identity = 44/131 (33.59%), Postives = 76/131 (58.02%), Query Frame = -2
Query:  373 ISDFGLAKLIPAN-MTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            ++DFGL++  P    THVST VAGT GYL PEY    ++  K+D+YSFG++L+EI++ R    ++   E+ ++      +  + ++  +VD  LN D++     + L++ + C   + + RP+MS V   L
Sbjct:  714 LADFGLSRSFPVGGETHVSTAVAGTPGYLDPEYYRTNRLNEKSDVYSFGIVLLEIITSR--PVIQQTREKPHIAAWVGYMLTKGDIENVVDPRLNRDYEPTSVWKALEIAMSCVNPSSEKRPTMSQVTNEL 842          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.567e-15
Identity = 41/126 (32.54%), Postives = 68/126 (53.97%), Query Frame = -2
Query:  385 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTV 762
            +SDFG ++ +  + TH++T VAGT GY+ PEY +  Q T K+D+YSFGV+LVE+++G    +     E + L     +  +   +I ++D  +  +   E+     K+   C     K RP+M  V
Sbjct:  570 VSDFGTSRSVTLDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPLSRVRSEEGRGLATHFLEAMKENRVIDIIDIRIKDESKLEQVMAVAKLARKCLNRKGKNRPNMKEV 695          
The following BLAST results are available for this feature:
BLAST of CN185603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
Y5977_ARATH2.948e-1534.59Probable leucine-rich repeat receptor-like protein... [more]
Y4245_ARATH5.028e-1535.11Probable LRR receptor-like serine/threonine-protei... [more]
Y2899_ARATH5.028e-1531.65Probable leucine-rich repeat receptor-like protein... [more]
Y1124_ARATH5.028e-1537.31Probable LRR receptor-like serine/threonine-protei... [more]
THE1_ARATH5.028e-1537.50Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
RLK6_ARATH5.028e-1535.16Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
Y5182_ARATH6.567e-1535.94Probable LRR receptor-like serine/threonine-protei... [more]
Y2317_ARATH6.567e-1537.23Probable leucine-rich repeat receptor-like protein... [more]
Y2289_ARATH6.567e-1533.59Probable LRR receptor-like serine/threonine-protei... [more]
WAKLA_ARATH6.567e-1532.54Wall-associated receptor kinase-like 1 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001J13_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001J13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185603 ID=CN185603; Name=CN185603; organism=Citrus sinensis; type=EST; length=763bp
GAGGAAAACTTCTCCATTTACAAGAAAATACCCAGTAAGTTTTGAAATAC
CAAATGAATACAAGATTGCAAAATCTACAAGGGACAACAAAGCCTCAAAA
CCCTAAAATGAAGAAATAAATTACTATGATTTGCTTTTAAACCGAATTAA
TGTTCAAGTGCTCCTATCATATGATACTGTAAAGGTCATAGTAGCAGCAC
TCGTGGCTGCCGATGACAAATTTGAGTTGTCTGGATTGTCCGAGCTATTA
TAAGTTGATGAAGTCGTTGTTTCCAACTTAGGTTTAGGGGGACCTCTTAC
TTTGAGGTCCATGAAATCGGAAATTAATCCTGGCTTTGTTATTTTATCAT
CATCTATGTCTTTCTCACCCATCAGCATCTGGACCACAGTTGACATGGAT
GGCCGGAGCTTTGGAGTGTCTTGAGTGCAGAGAAGACCAACCTTTAGGAA
TCTACAAGCCTCCTCAGCATCAAAATCGCCATTCAATGATGTATCTACCA
GTAGTATCAACTCCCTTCGCTCATATAAATCCCATGTCCGTTCTAGAAGA
TATTGCTCTTCGGTGGGCAATCGCATATTTGTGTTACACCTCCCACTGAC
TATTTCCACAAGGAGTACACCAAAACTGTATATATCTGCTTTCCGTGTCA
CTTGCCCTCTTATTGCATACTCTGGTGCTAGATAACCTATTGTTCCAGCA
ACCCTAGTGCTAACATGAGTCATGTTGGCCGGGATAAGCTTTGCAAGACC
AAAATCTGAAATT
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