CN185603

Overview
NameCN185603
Unique NameCN185603
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.559e-14
Identity = 48/133 (36.09%), Postives = 77/133 (57.89%), Query Frame = -2
Query:  373 ISDFGLAK---LIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            ++DFG+AK   +  +      + +AG+ GY+APEY    +V  K+DIYSFGV+L+E+V+G+  T+  L  ++  + +      ++  L  ++D  L+  F  EE  + + +GLLCT   P  RPSM  VV ML
Sbjct:  835 VADFGIAKVGQMSGSKTPEAMSGIAGSCGYIAPEYVYTLRVNEKSDIYSFGVVLLELVTGKQPTDSELGDKD--MAKWVCTALDKCGLEPVIDPKLDLKF-KEEISKVIHIGLLCTSPLPLNRPSMRKVVIML 964          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.261e-14
Identity = 40/130 (30.77%), Postives = 72/130 (55.38%), Query Frame = -2
Query:  373 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            ++DFG ++LIP +   ++T V GT+GYL PEY   G +  K+D+YSFGV+L+E++SG+       P   ++++       +   L  ++D  +  + +  E  +  ++ + CT+ T + RP M  V   L
Sbjct:  551 VADFGASRLIPMDKEDLATMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFERPQTSKHIVSYFASATKENRLHEIIDGQVMNENNQREIQKAARIAVECTRLTGEERPGMKEVAAEL 680          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana GN=SRF6 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.261e-14
Identity = 52/133 (39.10%), Postives = 74/133 (55.64%), Query Frame = -2
Query:  370 ISDFGLAKLIP-ANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLE-RTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLM 762
            +SD GLA  +P AN     T      GY APE ++ GQ + K+DIYSFGV+++E+++GR   +      EQ L+   T  L++   L  +VD +L G +  +   RF  V  LC Q  P+ RP MS VVQ L+
Sbjct:  560 LSDSGLASFLPTANELLNQTDE----GYSAPEVSMSGQYSLKSDIYSFGVVMLELLTGRKPFDSTRSRSEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALV 688          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.261e-14
Identity = 49/143 (34.27%), Postives = 80/143 (55.94%), Query Frame = -2
Query:  343 ISDFGLAKLIPANMTHVS-TRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAE-EACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEK-DIDDDK 762
            +SDFG+A+L+ A  TH+S + +AGT GY+ PEY    + T K D+YS+GV+L+E++SG+   +     E+  L+     LY  +    ++D  L  D   + E   +LK+   C  D P  RP+M  ++ M    K D ++D+
Sbjct: 1003 VSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPGEFGEDNNLVGWAKQLYREKRGAEILDPELVTDKSGDVELFHYLKIASQCLDDRPFKRPTMIQLMAMFKEMKADTEEDE 1145          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.483e-14
Identity = 41/127 (32.28%), Postives = 68/127 (53.54%), Query Frame = -2
Query:  382 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVV 762
            +SDFGL++    ++THVS+   GT+GYL PEY    Q+T K+D+YSFGV+L E++SG+   +      E  ++     L  + ++  ++D  +  +   E   R  +V   C +     RP M  V+
Sbjct:  747 VSDFGLSRQTEEDLTHVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPELNIVHWARSLIRKGDVCGIIDPCIASNVKIESVWRVAEVANQCVEQRGHNRPRMQEVI 873          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.238e-13
Identity = 60/156 (38.46%), Postives = 85/156 (54.49%), Query Frame = -2
Query:  346 ISDFGLAKLIPANMTHVSTRVAGTIG---YLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQ--------YLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCT-QDTPKLRPSMSTVVQML--MGEK---DIDDD 762
            ISDFGLA+L+    TH+ST V G  G   Y+APEY+     T K D+YSFGV+L+E+V+G+  T++   +EE+         L+E    L    +L   +D SL G+   +E  + LKV   C   +  K RP+M  V Q+L  +GE      DDD
Sbjct:  445 ISDFGLARLMNPIDTHLSTFVNGEFGDFGYVAPEYSRTMVATPKGDVYSFGVVLLELVTGQKATSVTKVSEEKAEEENFKGNLVEWITKLSSESKLQEAIDRSLLGNGVDDEIFKVLKVACNCVLPEIAKQRPTMFEVYQLLRAIGESYNFTADDD 600          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.238e-13
Identity = 43/128 (33.59%), Postives = 74/128 (57.81%), Query Frame = -2
Query:  385 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQ--YLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTV 762
            +SDFG ++ +  + TH++T+VAGT GY+ PEY    + T K+D+YSFGV+LVE+++G+ N + R+ +EE   +       + E R  + +VD  +  + + ++     K+   C     K RP+M  V
Sbjct:  565 VSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTDKSDVYSFGVVLVELITGK-NPSSRVQSEENRGFAAHFVAAVKENR-FLDIVDERIKDECNLDQVMAVAKLAKRCLNRKGKKRPNMREV 690          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.238e-13
Identity = 44/131 (33.59%), Postives = 74/131 (56.49%), Query Frame = -2
Query:  373 ISDFGLAKLIPANMT-HVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            ++DFGL++      +  +ST VAG+IGYL PEY    Q+  K+D+YS GV+L+E+++G+        TE+ ++ +    +    ++  +VD  L   +D   A +  ++ L CT+ T   RP+MS VV  L
Sbjct:  713 MADFGLSRSFSVEGSGQISTVVAGSIGYLDPEYYSTRQMNEKSDVYSLGVVLLEVITGQ-PAIASSKTEKVHISDHVRSILANGDIRGIVDQRLRERYDVGSAWKMSEIALACTEHTSAQRPTMSQVVMEL 842          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.238e-13
Identity = 45/133 (33.83%), Postives = 74/133 (55.64%), Query Frame = -2
Query:  373 ISDFGLAKLIP-ANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNG--DFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            I DFGLAKL+   +    S  +AG+ GY+APEY    ++T K+D+YS+GV+++E+++G+   +  +P     +     D  ++   I ++D  L    + + EE  + L V LLC    P+ RP+M  V  ML
Sbjct:  936 IGDFGLAKLVDDGDFARSSNTIAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTIPDGLHIV-----DWVKKIRDIQVIDQGLQARPESEVEEMMQTLGVALLCINPIPEDRPTMKDVAAML 1063          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.238e-13
Identity = 50/131 (38.17%), Postives = 74/131 (56.49%), Query Frame = -2
Query:  373 ISDFGLAKLIPANM-THVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            ++DFGL+ L PA+  T +S   AGT+GYL PEY     +T K+D+YSFGV+L+EI+SGR   +M+   EE  ++E    L +  ++  ++D  L+   D E   +   V   C +   K RPSM  V   L
Sbjct:  650 VADFGLSILGPADSGTPLSELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVVLLEILSGRKAIDMQF--EEGNIVEWAVPLIKAGDIFAILDPVLSPPSDLEALKKIASVACKCVRMRGKDRPSMDKVTTAL 778          
The following BLAST results are available for this feature:
BLAST of CN185603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
RLK5_ARATH5.559e-1436.09Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
WAK4_ARATH7.261e-1430.77Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]
SRF6_ARATH7.261e-1439.10Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsi... [more]
BRL1_ARATH7.261e-1434.27Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
Y1677_ARATH9.483e-1432.28Probable LRR receptor-like serine/threonine-protei... [more]
Y5838_ARATH1.238e-1338.46Probably inactive leucine-rich repeat receptor-lik... [more]
WAKLD_ARATH1.238e-1333.59Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
SIRK_ARATH1.238e-1333.59Senescence-induced receptor-like serine/threonine-... [more]
RCH1_ARATH1.238e-1333.83LRR receptor-like serine/threonine-protein kinase ... [more]
CRI4_MAIZE1.238e-1338.17Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001J13_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001J13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185603 ID=CN185603; Name=CN185603; organism=Citrus sinensis; type=EST; length=763bp
GAGGAAAACTTCTCCATTTACAAGAAAATACCCAGTAAGTTTTGAAATAC
CAAATGAATACAAGATTGCAAAATCTACAAGGGACAACAAAGCCTCAAAA
CCCTAAAATGAAGAAATAAATTACTATGATTTGCTTTTAAACCGAATTAA
TGTTCAAGTGCTCCTATCATATGATACTGTAAAGGTCATAGTAGCAGCAC
TCGTGGCTGCCGATGACAAATTTGAGTTGTCTGGATTGTCCGAGCTATTA
TAAGTTGATGAAGTCGTTGTTTCCAACTTAGGTTTAGGGGGACCTCTTAC
TTTGAGGTCCATGAAATCGGAAATTAATCCTGGCTTTGTTATTTTATCAT
CATCTATGTCTTTCTCACCCATCAGCATCTGGACCACAGTTGACATGGAT
GGCCGGAGCTTTGGAGTGTCTTGAGTGCAGAGAAGACCAACCTTTAGGAA
TCTACAAGCCTCCTCAGCATCAAAATCGCCATTCAATGATGTATCTACCA
GTAGTATCAACTCCCTTCGCTCATATAAATCCCATGTCCGTTCTAGAAGA
TATTGCTCTTCGGTGGGCAATCGCATATTTGTGTTACACCTCCCACTGAC
TATTTCCACAAGGAGTACACCAAAACTGTATATATCTGCTTTCCGTGTCA
CTTGCCCTCTTATTGCATACTCTGGTGCTAGATAACCTATTGTTCCAGCA
ACCCTAGTGCTAACATGAGTCATGTTGGCCGGGATAAGCTTTGCAAGACC
AAAATCTGAAATT
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