CN185603

Overview
NameCN185603
Unique NameCN185603
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.617e-13
Identity = 43/135 (31.85%), Postives = 79/135 (58.52%), Query Frame = -2
Query:  373 ISDFGLAKLIPAN-----MTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            ++DFG++KLI  +       HV+T V GT GY+ PEY +  ++T K+D+YS G++ +EI++G     MR  +  + ++    +  +   ++ ++D S+ G +  E   RF+++ + C QD P+ RP M  +V+ L
Sbjct:  771 VADFGISKLIALDGGGVQRDHVTTIVKGTPGYVDPEYYLSHRLTEKSDVYSLGIVFLEILTG-----MRPISHGRNIVREVNEACDAGMMMSVIDRSM-GQYSEECVKRFMELAIRCCQDNPEARPWMLEIVREL 899          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.617e-13
Identity = 43/127 (33.86%), Postives = 67/127 (52.76%), Query Frame = -2
Query:  385 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYER-RELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTV 762
            +SDFG ++ +  + TH +T ++GT+GY+ PEY      T K+D+YSFGV+LVE+++G         T+E   L   + L  R   L  ++D  +  D   E+      + L C + T K RP M  V
Sbjct:  595 VSDFGTSRSVSIDHTHWTTVISGTVGYVDPEYYGSSHFTEKSDVYSFGVVLVELITGEKPVITLSETQEITGLADYFRLAMRENRLFEIIDARIRNDCKLEQVIAVANLALRCLKKTGKTRPDMREV 721          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.617e-13
Identity = 49/135 (36.30%), Postives = 79/135 (58.52%), Query Frame = -2
Query:  370 ISDFGLAKLIPA-NMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTW---DLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLM 762
            +SD GLA LI + +++ +S ++    GY APE+   G  T ++D+YSFGV+++E+++GR + +      EQ+L+   W    L++   L  +VD SLNG + A+    F  +   C Q  P+ RP MS VVQ L+
Sbjct:  629 VSDCGLAPLISSGSVSQLSGQLLAAYGYGAPEFD-SGIYTWQSDVYSFGVVMLELLTGRMSYDRDRSRGEQFLVR--WAIPQLHDIDALGKMVDPSLNGQYPAKSLSHFADIISRCVQSEPEFRPLMSEVVQDLL 760          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: GSO2_ARATH (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.617e-13
Identity = 51/141 (36.17%), Postives = 76/141 (53.90%), Query Frame = -2
Query:  370 ISDFGLAKLIPANM---THVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYL--LERTWDL---YERRELILLVDTSLNGDFDAEE--ACRFLKVGLLCTQDTPKLRPSMSTVVQMLM 762
            + DFGLAK++  N    T  +T  AG+ GY+APEYA   + T K+D+YS G++L+EIV+G+  T      E   +  +E   D     E RE   L+D+ L      EE  A + L++ L CT+  P+ RPS     + L+
Sbjct: 1095 LGDFGLAKILTGNYDTNTESNTMFAGSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTEAMFDEETDMVRWVETVLDTPPGSEARE--KLIDSELKSLLPCEEEAAYQVLEIALQCTKSYPQERPSSRQASEYLL 1233          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.112e-13
Identity = 38/126 (30.16%), Postives = 69/126 (54.76%), Query Frame = -2
Query:  385 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTV 762
            +SDFG ++ +  + TH++T+VAGT GY+ PEY    + T K+D+YSFGV+LVE+++G   ++     E + L     +  +   ++ +VD  +  + + ++      +   C     K RP+M  V
Sbjct:  557 VSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTEKSDVYSFGVVLVELLTGEKPSSRVRSEENRGLAAHFVEAVKENRVLDIVDDRIKDECNMDQVMSVANLARRCLNRKGKKRPNMREV 682          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.759e-13
Identity = 47/136 (34.56%), Postives = 77/136 (56.62%), Query Frame = -2
Query:  361 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFD--AEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEK 762
            ++DFG+AKLI  + +   + VAG+ GY+APEYA   QV +K+DIYS+GV+L+EI++G+ +           +      L  + ++  ++D S+        EE  + L++ LLCT  +P  RP M  V+ +L   K
Sbjct:  868 VADFGVAKLIQTDES--MSVVAGSYGYIAPEYAYTLQVDKKSDIYSYGVILLEIITGKRSVEPEFGEGNSIVDWVRSKLKTKEDVEEVLDKSMGRSCSLIREEMKQMLRIALLCTSRSPTDRPPMRDVLLILQEAK 1001          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.759e-13
Identity = 48/132 (36.36%), Postives = 73/132 (55.30%), Query Frame = -2
Query:  370 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLE-RTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLM 762
            +SD GLA  +P     ++    G   Y APE ++ GQ + K+D+YSFGV+++E+++GR   +      EQ L+   T  L++   L  +VD +L G +  +   RF  V  LC Q  P+ RP MS VVQ L+
Sbjct:  563 LSDSGLASFLPTANELLNQNDEG---YSAPETSMSGQYSLKSDVYSFGVVMLELLTGRKPFDSTRSRSEQSLVRWATPQLHDIDALGKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALV 691          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.603e-13
Identity = 47/169 (27.81%), Postives = 82/169 (48.52%), Query Frame = -2
Query:  295 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTV------VQMLMGEKDI-------DDDKITKPGLISDFMDLKVR 762
            +SDFG ++ +  + TH++T V+GT+GY+ PEY    Q T K+D+YSFGV+LVE+++G  + +     E + L        +  +L  ++D  +       +     KV   C     + RPSM  V      ++M  G+  +       ++ +    GL+ D M  + R
Sbjct:  589 VSDFGTSRTVTVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLVELITGEKSISFLRSQENRTLATYFILAMKENKLFDIIDARIRDGCMLSQVTATAKVARKCLNLKGRKRPSMREVSMELDSIRMPCGDMQLQECVSENEEGEEQNKGLVEDIMRAESR 757          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: SRF2_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsis thaliana GN=SRF2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.603e-13
Identity = 46/135 (34.07%), Postives = 73/135 (54.07%), Query Frame = -2
Query:  373 ISDFGLAKLIPANMTHVSTRVAG----TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLE-RTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            I+D GLA L P     V  R +       GY+APE+   G    K+D Y+ GVLL+E+++GR   +   P  EQ L++  +  L++RR L  ++D  + G F +  A ++  +  LCTQ   + RP +S +V+ L
Sbjct:  557 IADCGLASLRPLTSNSVKLRASEIAIQNTGYIAPEHGQPGSSGTKSDTYALGVLLLELLTGRKAFDSSRPRGEQLLVKWASTRLHDRRSLEQMIDGGIAGTFSSRVASQYADIISLCTQAEKEFRPPVSEIVEAL 691          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.603e-13
Identity = 42/131 (32.06%), Postives = 72/131 (54.96%), Query Frame = -2
Query:  373 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDF-DAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            ++DFG+AK +  + +H ST V GTIGY+ PEYA   ++T K+D+YS+G++L+E++     T  +   +E  L           E++ + D  +     D     +  ++ LLCT+  P  RP+M  V ++L
Sbjct:  789 LTDFGIAKSLCVSKSHTSTYVMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELL-----TRRKAVDDESNLHHLIMSKTGNNEVMEMADPDITSTCKDLGVVKKVFQLALLCTKRQPNDRPTMHQVTRVL 914          
The following BLAST results are available for this feature:
BLAST of CN185603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
Y5374_ARATH1.617e-1331.85Probable LRR receptor-like serine/threonine-protei... [more]
WAKLL_ARATH1.617e-1333.86Putative wall-associated receptor kinase-like 13 O... [more]
SRF3_ARATH1.617e-1336.30Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsi... [more]
GSO2_ARATH1.617e-1336.17LRR receptor-like serine/threonine-protein kinase ... [more]
WAKLB_ARATH2.112e-1330.16Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
Y5148_ARATH2.759e-1334.56Probable leucine-rich repeat receptor-like protein... [more]
SRF7_ARATH2.759e-1336.36Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsi... [more]
WAKLH_ARATH3.603e-1327.81Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
SRF2_ARATH3.603e-1334.07Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsi... [more]
ERECT_ARATH3.603e-1332.06LRR receptor-like serine/threonine-protein kinase ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0001J13_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001J13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185603 ID=CN185603; Name=CN185603; organism=Citrus sinensis; type=EST; length=763bp
GAGGAAAACTTCTCCATTTACAAGAAAATACCCAGTAAGTTTTGAAATAC
CAAATGAATACAAGATTGCAAAATCTACAAGGGACAACAAAGCCTCAAAA
CCCTAAAATGAAGAAATAAATTACTATGATTTGCTTTTAAACCGAATTAA
TGTTCAAGTGCTCCTATCATATGATACTGTAAAGGTCATAGTAGCAGCAC
TCGTGGCTGCCGATGACAAATTTGAGTTGTCTGGATTGTCCGAGCTATTA
TAAGTTGATGAAGTCGTTGTTTCCAACTTAGGTTTAGGGGGACCTCTTAC
TTTGAGGTCCATGAAATCGGAAATTAATCCTGGCTTTGTTATTTTATCAT
CATCTATGTCTTTCTCACCCATCAGCATCTGGACCACAGTTGACATGGAT
GGCCGGAGCTTTGGAGTGTCTTGAGTGCAGAGAAGACCAACCTTTAGGAA
TCTACAAGCCTCCTCAGCATCAAAATCGCCATTCAATGATGTATCTACCA
GTAGTATCAACTCCCTTCGCTCATATAAATCCCATGTCCGTTCTAGAAGA
TATTGCTCTTCGGTGGGCAATCGCATATTTGTGTTACACCTCCCACTGAC
TATTTCCACAAGGAGTACACCAAAACTGTATATATCTGCTTTCCGTGTCA
CTTGCCCTCTTATTGCATACTCTGGTGCTAGATAACCTATTGTTCCAGCA
ACCCTAGTGCTAACATGAGTCATGTTGGCCGGGATAAGCTTTGCAAGACC
AAAATCTGAAATT
back to top