CN185603

Overview
NameCN185603
Unique NameCN185603
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.050e-12
Identity = 48/136 (35.29%), Postives = 75/136 (55.15%), Query Frame = -2
Query:  373 ISDFGLAKLIPA------NMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            ++DFGL++L P       +  HVST V GT GYL PEY +  Q+T K+D+YS GV+L+E+ +G     M+  T  + ++      YE   ++  VD  ++   D E   +F  + L C ++    RPSM+ VV+ L
Sbjct:  765 VADFGLSRLAPVPDMEGISPQHVSTVVKGTPGYLDPEYFLTHQLTDKSDVYSLGVVLLELFTG-----MQPITHGKNIVREINIAYESGSILSTVDKRMSSVPD-ECLEKFATLALRCCREETDARPSMAEVVREL 894          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.050e-12
Identity = 41/127 (32.28%), Postives = 70/127 (55.12%), Query Frame = -2
Query:  385 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTW-DLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTV 762
            ISDFG ++ +  + TH++T VAGT GY+ PEY +  Q T K+D+YSFGV+LVE+++G      R+ +EE   L   + +  +    + ++D  +    ++++     K+   C       RP+M  V
Sbjct:  569 ISDFGTSRSVATDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGE-KPMSRVRSEEGIGLATYFLEAMKENRAVDIIDIRIKD--ESKQVMAVAKLARRCLNRKGNKRPNMREV 692          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.050e-12
Identity = 39/131 (29.77%), Postives = 75/131 (57.25%), Query Frame = -2
Query:  373 ISDFGLAKLIPAN-MTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            ++DFGL++       +  ST +AGT+GYL PE    G++  K+D+YSFG++L+E+++ +   N    + + ++ +       R +++ ++D +L  D++   A R L++ + C   +   RPSMS V+  L
Sbjct:  705 LADFGLSRSFQGEGESQESTTIAGTLGYLDPECYHSGRLGEKSDVYSFGIVLLEMITNQPVINQ--TSGDSHITQWVGFQMNRGDILEIMDPNLRKDYNINSAWRALELAMSCAYPSSSKRPSMSQVIHEL 833          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: FLS2_ARATH (LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.984e-12
Identity = 45/142 (31.69%), Postives = 79/142 (55.63%), Query Frame = -2
Query:  370 ISDFGLAKLI----PANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDL---YERRELILLVDTSLNG---DFDAEEACR-FLKVGLLCTQDTPKLRPSMSTVVQMLM 762
            +SDFG A+++      + T  ++   GTIGYLAPE+A   +VT KAD++SFG++++E+++ +  T++     +   L +  +      R+ ++ ++D  L         EEA   FLK+ L CT   P+ RP M+ ++  LM
Sbjct: 1013 VSDFGTARILGFREDGSTTASTSAFEGTIGYLAPEFAYMRKVTTKADVFSFGIIMMELMTKQRPTSLNDEDSQDMTLRQLVEKSIGNGRKGMVRVLDMELGDSIVSLKQEEAIEDFLKLCLFCTSSRPEDRPDMNEILTHLM 1154          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y5393_ARATH (Probable receptor-like protein kinase At5g39030 OS=Arabidopsis thaliana GN=At5g39030 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.796e-12
Identity = 48/141 (34.04%), Postives = 74/141 (52.48%), Query Frame = -2
Query:  358 ISDFGLAKLIPANMTHVSTR-VAGTIGYLAPEYAIR--GQVTRKADIYSFGVLLVEIVSGRCNTNMRL---PTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEKD 762
            +SDFGLAKL     + +S     GTIGY+APE   R  G+V+ K+D+YSFG+L+++++  R    +          Y  +  +   E  E   +    +  + + E A + + VGL C Q  P  RPSM+ VV+M+ G  D
Sbjct:  637 VSDFGLAKLCEKRESVLSLMDTRGTIGYIAPEVFSRMYGRVSHKSDVYSFGMLVIDMIGARSKEIVETVDSAASSTYFPDWIYKDLEDGEQTWIFGDEITKE-EKEIAKKMIVVGLWCIQPCPSDRPSMNRVVEMMEGSLD 776          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y3804_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 OS=Arabidopsis thaliana GN=At3g28040 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.796e-12
Identity = 42/135 (31.11%), Postives = 74/135 (54.81%), Query Frame = -2
Query:  373 ISDFGLAKLIPAN--MTHVSTRVAGTIGYLAPEYAIRG-QVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLL--ERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            ISDFGL++L+      T  + R    +GY+APE   +  +V  K D+Y FGVL++E+V+GR         E+ +++  +    + E+  ++  +D  +   +  +E    LK+ L+CT   P  RP+M+ +VQ+L
Sbjct:  870 ISDFGLSRLLTTQDGNTMNNNRFQNALGYVAPELECQNLRVNEKCDVYGFGVLILELVTGRRPVEYG---EDSFVILSDHVRVMLEQGNVLECIDPVMEEQYSEDEVLPVLKLALVCTSQIPSNRPTMAEIVQIL 1001          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: EFR_ARATH (LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana GN=EFR PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.796e-12
Identity = 49/138 (35.51%), Postives = 79/138 (57.25%), Query Frame = -2
Query:  370 ISDFGLAKLI-----PANMTHVSTR-VAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRF-LKVGLLCTQDTPKLRPSMSTVVQMLM 762
            +SDFGLA+L+      + +   S+  V GTIGY APEY + GQ + + D+YSFG+LL+E+ SG      + PT+E +  +  ++L+   + IL   TS  G    +E  R  L+VG+ C+++ P+ R      V+ L+
Sbjct:  865 VSDFGLAQLLYKYDRESFLNQFSSAGVRGTIGYAAPEYGMGGQPSIQGDVYSFGILLLEMFSG------KKPTDESFAGD--YNLHSYTKSILSGCTSSGGSNAIDEGLRLVLQVGIKCSEEYPRDRMRTDEAVRELI 994          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.875e-12
Identity = 44/128 (34.38%), Postives = 69/128 (53.91%), Query Frame = -2
Query:  382 ISDFGLAKLIPA-NMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVV 762
            ++DFGL++  P  + THVST V G+ GYL PEY  R Q+T K+D+YSFGV+L E++  R   +  L  E+  L E   +   +  L  +VD ++  +       +F +    C  D    RP++  V+
Sbjct:  629 VADFGLSRSGPCIDETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPLLVREQVNLAEWAIEWQRKGMLDQIVDPNIADEIKPCSLKKFAETAEKCCADYGVDRPTIGDVL 756          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.159e-11
Identity = 40/130 (30.77%), Postives = 68/130 (52.31%), Query Frame = -2
Query:  373 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            ++DFG +KL P +   ++T V GT+GYL PEY     +  K+D+YSFGV+L+E++SG+       P   ++L+       +   L  ++D  +  + +  E     +V + CT+   + RP M  V   L
Sbjct:  249 VADFGASKLKPMDKEQLTTMVQGTLGYLDPEYYTTWLLNEKSDVYSFGVVLMELISGQKALCFERPETSKHLVSYFVLATKENRLHEIIDDQVLNEENQREIHEAARVAVECTRLKGEERPRMIEVAAEL 378          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 1.159e-11
Identity = 41/136 (30.15%), Postives = 72/136 (52.94%), Query Frame = -2
Query:  373 ISDFGLAK-LIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGR-----CNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            ++DFGLAK L+    +   + +AG+ GY+APEYA   +V  K+D+YSFGV+L+E+++G+         + +    +   E      +   ++ +VD  L G +         K+ ++C ++    RP+M  VV ML
Sbjct:  833 VADFGLAKFLVDGAASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFGEGVDIVRWVRNTEEEITQPSDAAIVVAIVDPRLTG-YPLTSVIHVFKIAMMCVEEEAAARPTMREVVHML 967          
The following BLAST results are available for this feature:
BLAST of CN185603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
Y1684_ARATH3.050e-1235.29Probable LRR receptor-like serine/threonine-protei... [more]
WAKLC_ARATH3.050e-1232.28Wall-associated receptor kinase-like 3 OS=Arabidop... [more]
RLK7_ARATH3.050e-1229.77Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
FLS2_ARATH3.984e-1231.69LRR receptor-like serine/threonine-protein kinase ... [more]
Y5393_ARATH6.796e-1234.04Probable receptor-like protein kinase At5g39030 OS... [more]
Y3804_ARATH6.796e-1231.11Probably inactive leucine-rich repeat receptor-lik... [more]
EFR_ARATH6.796e-1235.51LRR receptor-like serine/threonine-protein kinase ... [more]
Y5241_ARATH8.875e-1234.38Probable receptor-like protein kinase At5g24010 OS... [more]
WAKLS_ARATH1.159e-1130.77Putative wall-associated receptor kinase-like 16 O... [more]
CLV1_ARATH1.159e-1130.15Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001J13_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001J13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185603 ID=CN185603; Name=CN185603; organism=Citrus sinensis; type=EST; length=763bp
GAGGAAAACTTCTCCATTTACAAGAAAATACCCAGTAAGTTTTGAAATAC
CAAATGAATACAAGATTGCAAAATCTACAAGGGACAACAAAGCCTCAAAA
CCCTAAAATGAAGAAATAAATTACTATGATTTGCTTTTAAACCGAATTAA
TGTTCAAGTGCTCCTATCATATGATACTGTAAAGGTCATAGTAGCAGCAC
TCGTGGCTGCCGATGACAAATTTGAGTTGTCTGGATTGTCCGAGCTATTA
TAAGTTGATGAAGTCGTTGTTTCCAACTTAGGTTTAGGGGGACCTCTTAC
TTTGAGGTCCATGAAATCGGAAATTAATCCTGGCTTTGTTATTTTATCAT
CATCTATGTCTTTCTCACCCATCAGCATCTGGACCACAGTTGACATGGAT
GGCCGGAGCTTTGGAGTGTCTTGAGTGCAGAGAAGACCAACCTTTAGGAA
TCTACAAGCCTCCTCAGCATCAAAATCGCCATTCAATGATGTATCTACCA
GTAGTATCAACTCCCTTCGCTCATATAAATCCCATGTCCGTTCTAGAAGA
TATTGCTCTTCGGTGGGCAATCGCATATTTGTGTTACACCTCCCACTGAC
TATTTCCACAAGGAGTACACCAAAACTGTATATATCTGCTTTCCGTGTCA
CTTGCCCTCTTATTGCATACTCTGGTGCTAGATAACCTATTGTTCCAGCA
ACCCTAGTGCTAACATGAGTCATGTTGGCCGGGATAAGCTTTGCAAGACC
AAAATCTGAAATT
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