CN185603

Overview
NameCN185603
Unique NameCN185603
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: WAKLP_ARATH (Wall-associated receptor kinase-like 15 OS=Arabidopsis thaliana GN=WAKL15 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.977e-11
Identity = 39/131 (29.77%), Postives = 74/131 (56.49%), Query Frame = -2
Query:  379 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGL---LCTQDTPKLRPSMSTVVQ 762
            ++DFGL++L  ++++HV+T   GT+GYL PEY +  Q+T K+D+YSFGV+L E+++ +   +     E+  L+       +   L+ ++D  +      +E      +G+   LC ++T + RP+M    +
Sbjct:  500 VADFGLSRLGVSDVSHVTTCAQGTLGYLDPEYYLNFQLTDKSDVYSFGVVLFELLTCKKAIDFNREEEDVNLVVFVRKALKEGRLMDVIDPVIGIGATEKEIESMKALGVLAELCVKETRQCRPTMQVAAK 630          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: WAKLF_ARATH (Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana GN=WAKL6 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.582e-11
Identity = 30/57 (52.63%), Postives = 43/57 (75.44%), Query Frame = -2
Query:  592 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 762
            +SDFG ++ I    TH++T VAGT GY+ PEY +  Q T K+D+YSFGV+LVE+++G
Sbjct:  575 VSDFGTSRSITIAQTHLTTLVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITG 631          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: IRAK4_BOVIN (Interleukin-1 receptor-associated kinase 4 OS=Bos taurus GN=IRAK4 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.582e-11
Identity = 48/132 (36.36%), Postives = 73/132 (55.30%), Query Frame = -2
Query:  373 ISDFGLAKLIPA-NMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELIL-LVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            ISDFGLA+       T +++R+ GT  Y+APE A+RG++T K+DIYSFGV+L+EI++G    +     E Q LL+   ++ +  + I   VD  +N D D+        V   C  +    RP +  V Q+L
Sbjct:  328 ISDFGLARASEKFAQTVMTSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEH--REPQLLLDIKEEIEDEEKTIEDYVDRKMN-DIDSTSIETMYSVASQCLHEKKNKRPDIKKVQQLL 455          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y3288_ARATH (Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana GN=At3g02880 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.373e-11
Identity = 44/132 (33.33%), Postives = 73/132 (55.30%), Query Frame = -2
Query:  373 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLN--GDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            +SD+GLA +I +  T    R+ G   Y APE     ++++KAD+YSFGVL++E+++G+  T+ +L  E   L      + E++    ++D  L        E   R LK+G+ CT   P  RPSM+ V +++
Sbjct:  486 VSDYGLAPIISS--TSAPNRIDG---YRAPEITDARKISQKADVYSFGVLILELLTGKSPTHQQLNEEGVDLPRWVQSVTEQQTPSDVLDPELTRYQPEGNENIIRLLKIGMSCTAQFPDSRPSMAEVTRLI 612          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y2242_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.405e-11
Identity = 50/146 (34.25%), Postives = 74/146 (50.68%), Query Frame = -2
Query:  352 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQV--TRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLER-----TW--DLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEKDID 762
            +SDFGLAK+    +      + G+ GYL PE+        T K+D+Y FGV+L E+++G+       P E+ YL E+     +W   L  + +    +D  +      E+    LK+G LCT D P  RPSM  VV +L   KDI+
Sbjct:  714 LSDFGLAKVFGNGLD--DEIIHGSPGYLPPEFLQPEHELPTPKSDVYCFGVVLFELMTGK------KPIEDDYLDEKDTNLVSWVRSLVRKNQASKAIDPKIQETGSEEQMEEALKIGYLCTADLPSKRPSMQQVVGLL---KDIE 848          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: WAK2_ARATH (Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.405e-11
Identity = 39/130 (30.00%), Postives = 67/130 (51.54%), Query Frame = -2
Query:  373 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            ++DFG ++LIP +   ++T V GT+GYL PEY   G +  K+D+YSFGV+L+E++SG+       P   + L+       +      ++D  +  + +  E     ++   CT+   + RP M  V   L
Sbjct:  545 VADFGASRLIPMDKEQLTTIVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFERPHCPKNLVSCFASATKNNRFHEIIDGQVMNEDNQREIQEAARIAAECTRLMGEERPRMKEVAAEL 674          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: KPRO_MAIZE (Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.405e-11
Identity = 43/144 (29.86%), Postives = 76/144 (52.78%), Query Frame = -2
Query:  358 ISDFGLAKLIP-ANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQY--------LLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEKD 762
            I+DFGL KL+     T   + V GT+GY+APE+     +T K D+YS+GV+L+E+++G   + +   T+E +        +L    +  E+  +   +D+ LN   +  +A   +K+ + C ++    RP+M   VQ L+   D
Sbjct:  674 ITDFGLVKLLNRGGSTQNVSHVRGTLGYIAPEWVSSLPITAKVDVYSYGVVLLELLTGTRVSELVGGTDEVHSMLRKLVRMLSAKLEGEEQSWIDGYLDSKLNRPVNYVQARTLIKLAVSCLEEDRSKRPTMEHAVQTLLSADD 817          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: IRAK4_HUMAN (Interleukin-1 receptor-associated kinase 4 OS=Homo sapiens GN=IRAK4 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.405e-11
Identity = 47/132 (35.61%), Postives = 73/132 (55.30%), Query Frame = -2
Query:  373 ISDFGLAKLIPA-NMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELIL-LVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            ISDFGLA+       T +++R+ GT  Y+APE A+RG++T K+DIYSFGV+L+EI++G    +     E Q LL+   ++ +  + I   +D  +N D D+        V   C  +    RP +  V Q+L
Sbjct:  327 ISDFGLARASEKFAQTVMTSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEH--REPQLLLDIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 454          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: RLK90_ARATH (Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana GN=RLK902 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.753e-11
Identity = 48/149 (32.21%), Postives = 80/149 (53.69%), Query Frame = -2
Query:  340 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERREL--------ILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEKDIDDDKI 762
            +SDFGLA+L+ A+    ST      GY APE     +V++KAD+YSFGV+L+E+++G+  +N  +  EE   L R      R E         ++ ++T ++ +   EE    L++G+ CT+  P  RP M  VV+ +   +    D++
Sbjct:  506 VSDFGLAQLVSAS----STTPNRATGYRAPEVTDPRRVSQKADVYSFGVVLLELLTGKAPSN-SVMNEEGMDLARWVHSVAREEWRNEVFDSELMSIETVVSVE---EEMAEMLQLGIDCTEQHPDKRPVMVEVVRRIQELRQSGADRV 646          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana GN=SRF5 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.513e-11
Identity = 43/132 (32.58%), Postives = 70/132 (53.03%), Query Frame = -2
Query:  370 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLE-RTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLM 762
            +SD+GL+K       ++        GY APE       T K+D+YSFGV+++E+++GR   +   P  E+ L+   T  L++   L  + D +L+G +  +   RF  +  LC Q  P+ RP MS VV+ L+
Sbjct:  548 LSDYGLSKFYLRTSQNLGE------GYNAPEARDPSAYTPKSDVYSFGVVMLELLTGRVPFDGEKPRPERSLVRWATPQLHDIDALSNIADPALHGLYPPKSLSRFADIIALCVQVEPEFRPPMSEVVEALV 673          
The following BLAST results are available for this feature:
BLAST of CN185603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
WAKLP_ARATH1.977e-1129.77Wall-associated receptor kinase-like 15 OS=Arabido... [more]
WAKLF_ARATH2.582e-1152.63Wall-associated receptor kinase-like 6 OS=Arabidop... [more]
IRAK4_BOVIN2.582e-1136.36Interleukin-1 receptor-associated kinase 4 OS=Bos ... [more]
Y3288_ARATH3.373e-1133.33Probable inactive receptor kinase At3g02880 OS=Ara... [more]
Y2242_ARATH4.405e-1134.25Probable LRR receptor-like serine/threonine-protei... [more]
WAK2_ARATH4.405e-1130.00Wall-associated receptor kinase 2 OS=Arabidopsis t... [more]
KPRO_MAIZE4.405e-1129.86Putative receptor protein kinase ZmPK1 OS=Zea mays... [more]
IRAK4_HUMAN4.405e-1135.61Interleukin-1 receptor-associated kinase 4 OS=Homo... [more]
RLK90_ARATH5.753e-1132.21Probable inactive receptor kinase RLK902 OS=Arabid... [more]
SRF5_ARATH7.513e-1132.58Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001J13_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001J13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185603 ID=CN185603; Name=CN185603; organism=Citrus sinensis; type=EST; length=763bp
GAGGAAAACTTCTCCATTTACAAGAAAATACCCAGTAAGTTTTGAAATAC
CAAATGAATACAAGATTGCAAAATCTACAAGGGACAACAAAGCCTCAAAA
CCCTAAAATGAAGAAATAAATTACTATGATTTGCTTTTAAACCGAATTAA
TGTTCAAGTGCTCCTATCATATGATACTGTAAAGGTCATAGTAGCAGCAC
TCGTGGCTGCCGATGACAAATTTGAGTTGTCTGGATTGTCCGAGCTATTA
TAAGTTGATGAAGTCGTTGTTTCCAACTTAGGTTTAGGGGGACCTCTTAC
TTTGAGGTCCATGAAATCGGAAATTAATCCTGGCTTTGTTATTTTATCAT
CATCTATGTCTTTCTCACCCATCAGCATCTGGACCACAGTTGACATGGAT
GGCCGGAGCTTTGGAGTGTCTTGAGTGCAGAGAAGACCAACCTTTAGGAA
TCTACAAGCCTCCTCAGCATCAAAATCGCCATTCAATGATGTATCTACCA
GTAGTATCAACTCCCTTCGCTCATATAAATCCCATGTCCGTTCTAGAAGA
TATTGCTCTTCGGTGGGCAATCGCATATTTGTGTTACACCTCCCACTGAC
TATTTCCACAAGGAGTACACCAAAACTGTATATATCTGCTTTCCGTGTCA
CTTGCCCTCTTATTGCATACTCTGGTGCTAGATAACCTATTGTTCCAGCA
ACCCTAGTGCTAACATGAGTCATGTTGGCCGGGATAAGCTTTGCAAGACC
AAAATCTGAAATT
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