CN185603

Overview
NameCN185603
Unique NameCN185603
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.546e-22
Identity = 53/132 (40.15%), Postives = 83/132 (62.88%), Query Frame = -2
Query:  373 ISDFGLAKLIPANMTHVSTR-VAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNM-RLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            ++DFG+A++   + T  +TR V GT GY+APEYA+ GQ + K+D+YSFGVL+ EI+SG  N+++ ++      L+  TW L+     + LVD S   ++   +  R + + LLC Q+    RP+MS +VQML
Sbjct:  649 VADFGMARIFGMDQTEANTRRVVGTYGYMAPEYAMYGQFSMKSDVYSFGVLVFEIISGMKNSSLYQMDDSVSNLVTYTWRLWSNGSQLDLVDPSFGDNYQTHDITRCIHIALLCVQEDVDDRPNMSAIVQML 780          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 5.546e-22
Identity = 59/134 (44.03%), Postives = 82/134 (61.19%), Query Frame = -2
Query:  373 ISDFGLAKLIPA-NMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWD---LYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            +SDFGLAK  P  + +HVSTR+ GT GY APEY   G +T K+D+YS+GV+L+E++SGR   +   P  EQ L+E  W    L  +R+L  ++D  L   +  EEAC+   + L C     KLRP+M+ VV  L
Sbjct:  220 LSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQKLVE--WARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEVVSHL 351          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 7.244e-22
Identity = 55/135 (40.74%), Postives = 87/135 (64.44%), Query Frame = -2
Query:  364 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG-RCNTNMRLPTEEQ-YLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGE 762
            + DFGLAKL+    THV+T V GTIG++APEY   G+ + K D++ +G++L+E+++G R     RL  ++   LL+    L + ++L +LVD  L  +++  E  + ++V LLCTQ +P  RP MS VV+ML G+
Sbjct:  445 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQTNYEERELEQVIQVALLCTQGSPMERPKMSEVVRMLEGD 579          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 7.244e-22
Identity = 54/132 (40.91%), Postives = 84/132 (63.64%), Query Frame = -2
Query:  373 ISDFGLAKLIPANMTHVSTR-VAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNM-RLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            I+DFG+A++   + T   TR V GT GY++PEYA+ GQ + K+D+YSFGVL++EI+SG  N+++ ++      L+  TW L+       LVD S   ++   E  R + + LLC Q+  + RP+MS++VQML
Sbjct:  467 IADFGMARIFGMDQTEAMTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGMKNSSLYQMDESVGNLVTYTWRLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLCVQEDAEDRPTMSSIVQML 598          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 9.461e-22
Identity = 49/132 (37.12%), Postives = 83/132 (62.88%), Query Frame = -2
Query:  373 ISDFGLAKLIPANMTHVSTR-VAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNM-RLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            I+DFG+A++   + +  +TR +AGT GY++PEYA+RG  + K+D+YSFGVL++EI+SG+ N++   +      L+   W L+     + LVD ++   + + EA R + + LLC Q+ P  RP +  ++ ML
Sbjct:  486 IADFGMARIFGVDQSQANTRRIAGTFGYMSPEYAMRGHFSMKSDVYSFGVLVLEIISGKKNSSFYNIDDSGSNLVTHAWRLWRNGSPLELVDPTIGESYQSSEATRCIHIALLCVQEDPADRPLLPAIIMML 617          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 9.461e-22
Identity = 54/132 (40.91%), Postives = 83/132 (62.88%), Query Frame = -2
Query:  373 ISDFGLAKLIPANMTHVSTR-VAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNM-RLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            ++DFG+A++   + T  +TR V GT GY+APEYA+ G+ + K+D+YSFGVL++EIVSG  N+++ ++      L+  TW L+       LVD S   ++   E  R + + LLC Q+    RP+MS +VQML
Sbjct:  485 VADFGMARIFGMDQTEANTRRVVGTYGYMAPEYAMYGKFSMKSDVYSFGVLVLEIVSGMKNSSLDQMDGSISNLVTYTWRLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLCVQEDANDRPTMSAIVQML 616          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.236e-21
Identity = 54/135 (40.00%), Postives = 86/135 (63.70%), Query Frame = -2
Query:  364 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG-RCNTNMRLPTEEQ-YLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGE 762
            + DFGLA+L+    THV+T V GTIG++APEY   G+ + K D++ +G++L+E+++G R     RL  ++   LL+    L + ++L +LVD  L  ++   E  + ++V LLCTQ +P  RP MS VV+ML G+
Sbjct:  448 VGDFGLARLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQSNYTEAEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 582          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.236e-21
Identity = 50/132 (37.88%), Postives = 84/132 (63.64%), Query Frame = -2
Query:  373 ISDFGLAKLIPANMTHVSTR-VAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEE-QYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            ++DFG+A++   + +   TR V GT GY++PEY + GQ + K+D+YSFGVL++EI+SG+ N+N     E  + L+   W  +     + LVD+ L  ++ + E  R + + LLC Q+ P+ RP++ST++ ML
Sbjct:  462 VADFGMARIFRVDQSRADTRRVVGTHGYISPEYLMHGQFSVKSDVYSFGVLVLEIISGKRNSNFHETDESGKNLVTYAWRHWRNGSPLELVDSELEKNYQSNEVFRCIHIALLCVQNDPEQRPNLSTIIMML 593          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.236e-21
Identity = 53/132 (40.15%), Postives = 81/132 (61.36%), Query Frame = -2
Query:  373 ISDFGLAKLIPANMTHVSTR-VAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNM-RLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            I+DFG+A+    + T  +TR V GT GY+ PEY   GQ + K+D+YSFGVL++EIV G+ N++  ++      L+   W L+     + L+D ++    D ++  R + +GLLC Q+TP  RP MST+ QML
Sbjct:  470 IADFGMARNFRVDQTEDNTRRVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGKKNSSFYKIDDSGGNLVTHVWRLWNNDSPLDLIDPAIEESCDNDKVIRCIHIGLLCVQETPVDRPEMSTIFQML 601          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.614e-21
Identity = 56/134 (41.79%), Postives = 83/134 (61.94%), Query Frame = -2
Query:  364 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG-RCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGE 762
            + DFGLAKL+    +HV+T V GT+G++APEY   GQ + K D++ FG+LL+E+++G R     +  +++  +LE    L++  ++  LVD  L   +D  E    L+V LLCTQ  P  RP MS VVQML G+
Sbjct:  438 VGDFGLAKLLNHEDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSVSQKGAMLEWVRKLHKEMKVEELVDRELGTTYDRIEVGEMLQVALLCTQFLPAHRPKMSEVVQMLEGD 571          
The following BLAST results are available for this feature:
BLAST of CN185603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
CRK23_ARATH5.546e-2240.15Putative cysteine-rich receptor-like protein kinas... [more]
APK1B_ARATH5.546e-2244.03Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
SERK1_ARATH7.244e-2240.74Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
CRK19_ARATH7.244e-2240.91Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
CRK35_ARATH9.461e-2237.12Putative cysteine-rich receptor-like protein kinas... [more]
CRK20_ARATH9.461e-2240.91Putative cysteine-rich receptor-like protein kinas... [more]
SERK2_ARATH1.236e-2140.00Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
CRK33_ARATH1.236e-2137.88Putative cysteine-rich receptor-like protein kinas... [more]
CRK32_ARATH1.236e-2140.15Putative cysteine-rich receptor-like protein kinas... [more]
Y2239_ARATH1.614e-2141.79Probable LRR receptor-like serine/threonine-protei... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0001J13_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001J13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185603 ID=CN185603; Name=CN185603; organism=Citrus sinensis; type=EST; length=763bp
GAGGAAAACTTCTCCATTTACAAGAAAATACCCAGTAAGTTTTGAAATAC
CAAATGAATACAAGATTGCAAAATCTACAAGGGACAACAAAGCCTCAAAA
CCCTAAAATGAAGAAATAAATTACTATGATTTGCTTTTAAACCGAATTAA
TGTTCAAGTGCTCCTATCATATGATACTGTAAAGGTCATAGTAGCAGCAC
TCGTGGCTGCCGATGACAAATTTGAGTTGTCTGGATTGTCCGAGCTATTA
TAAGTTGATGAAGTCGTTGTTTCCAACTTAGGTTTAGGGGGACCTCTTAC
TTTGAGGTCCATGAAATCGGAAATTAATCCTGGCTTTGTTATTTTATCAT
CATCTATGTCTTTCTCACCCATCAGCATCTGGACCACAGTTGACATGGAT
GGCCGGAGCTTTGGAGTGTCTTGAGTGCAGAGAAGACCAACCTTTAGGAA
TCTACAAGCCTCCTCAGCATCAAAATCGCCATTCAATGATGTATCTACCA
GTAGTATCAACTCCCTTCGCTCATATAAATCCCATGTCCGTTCTAGAAGA
TATTGCTCTTCGGTGGGCAATCGCATATTTGTGTTACACCTCCCACTGAC
TATTTCCACAAGGAGTACACCAAAACTGTATATATCTGCTTTCCGTGTCA
CTTGCCCTCTTATTGCATACTCTGGTGCTAGATAACCTATTGTTCCAGCA
ACCCTAGTGCTAACATGAGTCATGTTGGCCGGGATAAGCTTTGCAAGACC
AAAATCTGAAATT
back to top