CN185603

Overview
NameCN185603
Unique NameCN185603
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.366e-20
Identity = 53/134 (39.55%), Postives = 84/134 (62.69%), Query Frame = -2
Query:  373 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQ----YLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            ++DFGLAK  P  MTH+STRVAGT+GY+APEYA+ GQ+T K+D+YSFGV+L+E++S R      + T+E+     + +  W L    + + +V+  +      E   +++ + +LC+      RP+M  VV+ML
Sbjct:  428 VADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRR----KAIVTDEEGQPVSVADWAWSLVREGQTLDVVEDGMPEKGPPEVLEKYVLIAVLCSHPQLHARPTMDQVVKML 557          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.330e-20
Identity = 56/132 (42.42%), Postives = 80/132 (60.61%), Query Frame = -2
Query:  370 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLE-RTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLM 762
            +SD GLA L P     VST+V G+ GY APE+A+ G  T K+D+Y+FGV+++E+++GR   +      EQ L+   T  L++   L  +VD SLNG + A+   RF  +  LC Q  P+ RP MS VVQ L+
Sbjct:  539 LSDSGLAALTPNTERQVSTQVVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTGRKPLDSSRTRAEQSLVRWATPQLHDIDALSKMVDPSLNGMYPAKSLSRFADIIALCIQPEPEFRPPMSEVVQQLV 670          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.330e-20
Identity = 57/138 (41.30%), Postives = 82/138 (59.42%), Query Frame = -2
Query:  349 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEKDIDD 762
            + DFGLA+L        +T V GTIGY+APE A  G+ +  +D+++FGVLL+EIVSGR  T+    +   +L +   +L+ R E++  VD  L   +D  EA   L VGLLC    P  RPSM TV++ L G+ D+ +
Sbjct:  506 LGDFGLARLYERGSQSNTTVVVGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVSGRRPTD----SGTFFLADWVMELHARGEILHAVDPRLGFGYDGVEARLALVVGLLCCHQRPTSRPSMRTVLRYLNGDDDVPE 639          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 3.975e-20
Identity = 52/134 (38.81%), Postives = 83/134 (61.94%), Query Frame = -2
Query:  373 ISDFGLAKLIPANMT---HVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFD-AEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            I+DFG+AKL   + T     +++VAGT GY+APEYA+ G+ + K D++SFGVL++EI+ G+ N          +LL   W  +   E++ +VD SL      ++E  + + +GLLC Q+  + RP+M++VV ML
Sbjct:  485 IADFGMAKLFDTDQTSQTRFTSKVAGTYGYMAPEYAMSGEFSVKTDVFSFGVLVLEIIKGKKNNWSPEEDSSLFLLSYVWKSWREGEVLNIVDPSLVETIGVSDEIMKCIHIGLLCVQENAESRPTMASVVVML 618          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 5.191e-20
Identity = 52/134 (38.81%), Postives = 82/134 (61.19%), Query Frame = -2
Query:  373 ISDFGLAKLIPANMTHVST-RVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQ---YLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            I+DFGLA +     T  +T R+AGT  Y++PEYA+ GQ + K+DIYSFGVL++EI+SG+ N+ +    E      L+     L+  +  + LVD +   ++ + E  R + + LLC Q+ P+ RP +ST++ ML
Sbjct:  491 IADFGLATIFGVEQTQGNTNRIAGTYAYMSPEYAMHGQYSMKSDIYSFGVLVLEIISGKKNSGVYQMDETSTAGNLVTYASRLWRNKSPLELVDPTFGRNYQSNEVTRCIHIALLCVQENPEDRPMLSTIILML 624          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 8.855e-20
Identity = 51/141 (36.17%), Postives = 86/141 (60.99%), Query Frame = -2
Query:  346 ISDFGLAKLIPANMTHVSTR-VAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNM-RLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEKDIDDD 762
            I+DFG+A++   + +  +T+ +AGT GY+ PEY  +GQ + ++D+YSFGVL++EI+ GR N  + +  T  + L+   W L+     + LVD +++ + + EE  R + + LLC Q  P  RPS+ST+  ML+    +  D
Sbjct:  477 IADFGMARIFGIDQSGANTKKIAGTRGYMPPEYVRQGQFSTRSDVYSFGVLVLEIICGRNNRFIHQSDTTVENLVTYAWRLWRNDSPLELVDPTISENCETEEVTRCIHIALLCVQHNPTDRPSLSTINMMLINNSYVLPD 617          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.855e-20
Identity = 60/147 (40.82%), Postives = 85/147 (57.82%), Query Frame = -2
Query:  328 ISDFGLAKLIPA-NMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLE-RTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEKDIDDDKITKPG 762
            +SDFGLAK  P  + THVST+V GT GY APEY   G++T K+D+YSFGV+L+E++SGR   +      E  L++  T  L ++R+L  ++DT L G +  + A     + L C     KLRP MS V+  L        + + KPG
Sbjct:  235 LSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGRRAMDNSNGGNEYSLVDWATPYLGDKRKLFRIMDTKLGGQYPQKGAFTAANLALQCLNPDAKLRPKMSEVLVTLE-----QLESVAKPG 376          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: CRK22_ARATH (Cysteine-rich receptor-like protein kinase 22 OS=Arabidopsis thaliana GN=CRK22 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.510e-19
Identity = 48/134 (35.82%), Postives = 83/134 (61.94%), Query Frame = -2
Query:  373 ISDFGLAKLIPANMTHVSTR-VAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRL---PTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            ISDFG+A +     +  +T  +A T  Y++PEYA+ G+ + K+D+YSFG+L++EI+SG+ N+++      T    L+   W L+     + L+D+S+  ++ + E  R + + LLC Q+ P+ RP +ST+V ML
Sbjct:  494 ISDFGMATVFGMEESRGNTNWIAETFVYMSPEYAVHGKFSMKSDVYSFGILILEIISGKKNSSLYQNDETTTAGNLVTYAWRLWRNGSQLKLLDSSIGRNYQSNEVTRCIHIALLCVQENPEDRPKLSTIVSML 627          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.576e-19
Identity = 56/145 (38.62%), Postives = 86/145 (59.31%), Query Frame = -2
Query:  331 ISDFGLAKLIPANMTH-VSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEKDIDDDKITKP 762
            ISDFG+A+    + T  V+ RV GT GY+APEYA+ G+ + K D+YSFGVL++EI++G+ N+ + L  E   L    W  +     + L+D  L    D +E+ + L++ L C Q+ P  RP+M +VV ML    D +  ++ KP
Sbjct:  474 ISDFGMARQFDFDNTQAVTRRVVGTYGYMAPEYAMHGRFSVKTDVYSFGVLVLEIITGKRNSGLGL-GEGTDLPTFAWQNWIEGTSMELIDPVLLQTHDKKESMQCLEIALSCVQENPTKRPTMDSVVSML--SSDSESRQLPKP 615          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 3.365e-19
Identity = 51/133 (38.35%), Postives = 75/133 (56.39%), Query Frame = -2
Query:  364 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGE 762
            +SDFGLAKL+ +  ++V+TRV GT GY+APEYA  G +  K+DIYSFG+L++EI++GR   +   P  E  L++    +   R    +VD  +     ++   R L V L C       RP M  ++ ML  E
Sbjct:  296 VSDFGLAKLLGSESSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQGETNLVDWLKSMVGNRRSEEVVDPKIPEPPSSKALKRVLLVALRCVDPDANKRPKMGHIIHMLEAE 428          
The following BLAST results are available for this feature:
BLAST of CN185603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
RKF3_ARATH1.366e-2039.55Probable LRR receptor-like serine/threonine-protei... [more]
SRF8_ARATH2.330e-2042.42Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
LRKA2_ARATH2.330e-2041.30Lectin-domain containing receptor kinase A4.2 OS=A... [more]
CRK41_ARATH3.975e-2038.81Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
CRK11_ARATH5.191e-2038.81Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
CRK14_ARATH8.855e-2036.17Cysteine-rich receptor-like protein kinase 14 OS=A... [more]
APK2A_ARATH8.855e-2040.82Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
CRK22_ARATH1.510e-1935.82Cysteine-rich receptor-like protein kinase 22 OS=A... [more]
CRK27_ARATH2.576e-1938.62Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
Y1154_ARATH3.365e-1938.35Probable serine/threonine-protein kinase At1g01540... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001J13_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001J13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185603 ID=CN185603; Name=CN185603; organism=Citrus sinensis; type=EST; length=763bp
GAGGAAAACTTCTCCATTTACAAGAAAATACCCAGTAAGTTTTGAAATAC
CAAATGAATACAAGATTGCAAAATCTACAAGGGACAACAAAGCCTCAAAA
CCCTAAAATGAAGAAATAAATTACTATGATTTGCTTTTAAACCGAATTAA
TGTTCAAGTGCTCCTATCATATGATACTGTAAAGGTCATAGTAGCAGCAC
TCGTGGCTGCCGATGACAAATTTGAGTTGTCTGGATTGTCCGAGCTATTA
TAAGTTGATGAAGTCGTTGTTTCCAACTTAGGTTTAGGGGGACCTCTTAC
TTTGAGGTCCATGAAATCGGAAATTAATCCTGGCTTTGTTATTTTATCAT
CATCTATGTCTTTCTCACCCATCAGCATCTGGACCACAGTTGACATGGAT
GGCCGGAGCTTTGGAGTGTCTTGAGTGCAGAGAAGACCAACCTTTAGGAA
TCTACAAGCCTCCTCAGCATCAAAATCGCCATTCAATGATGTATCTACCA
GTAGTATCAACTCCCTTCGCTCATATAAATCCCATGTCCGTTCTAGAAGA
TATTGCTCTTCGGTGGGCAATCGCATATTTGTGTTACACCTCCCACTGAC
TATTTCCACAAGGAGTACACCAAAACTGTATATATCTGCTTTCCGTGTCA
CTTGCCCTCTTATTGCATACTCTGGTGCTAGATAACCTATTGTTCCAGCA
ACCCTAGTGCTAACATGAGTCATGTTGGCCGGGATAAGCTTTGCAAGACC
AAAATCTGAAATT
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