CN185603

Overview
NameCN185603
Unique NameCN185603
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.395e-19
Identity = 51/133 (38.35%), Postives = 77/133 (57.89%), Query Frame = -2
Query:  367 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNM-RLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMG 762
            + DFGLAKL+    +HV+T V GTIG++APEY   GQ + K D++ FGVL++E+++G    +       +  +L     L   +    +VD  L G+FD       +++ LLCTQ  P LRP MS V+++L G
Sbjct:  442 VGDFGLAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMIDQGNGQVRKGMILSWVRTLKAEKRFAEMVDRDLKGEFDDLVLEEVVELALLCTQPHPNLRPRMSQVLKVLEG 574          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.395e-19
Identity = 55/134 (41.04%), Postives = 75/134 (55.97%), Query Frame = -2
Query:  361 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEK 762
            +SDFGLAKL+ +  +H++TRV GT GY+APEYA  G +  K+DIYSFGVLL+E ++GR   +   P  E  L+E    +   R    +VD  L          R L V L C     + RP MS V +ML  ++
Sbjct:  325 LSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPRLEPRPSKSALKRALLVSLRCVDPEAEKRPRMSQVARMLESDE 458          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.740e-19
Identity = 52/141 (36.88%), Postives = 83/141 (58.87%), Query Frame = -2
Query:  364 ISDFGLAKLIPANMTHVST-RVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVD-------TSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGE 762
            ISDFG+A++   + T  +T +V GT GY++PEYA+ G  + K+D++SFGV+++EIVSG+ N        E  LL   W  ++    + +VD       +S    F  +E  + +++GLLC Q+  + RP+MS+VV M   E
Sbjct:  669 ISDFGMARIFERDETEANTMKVVGTYGYMSPEYAMYGIFSEKSDVFSFGVIVLEIVSGKKNRGFYNLDYENDLLSYVWSRWKEGRALEIVDPVIVDSLSSQPSIFQPQEVLKCIQIGLLCVQELAEHRPAMSSVVWMFGSE 809          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.496e-19
Identity = 54/142 (38.03%), Postives = 82/142 (57.75%), Query Frame = -2
Query:  346 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEK---DIDDD 762
            + DFGLA+L        +T + GTIGY+APE +  G  +  +D+++FGVLL+EIV GR  T+    +   +L++   +L+   E++  +D  L   +D  EA   L VGLLC    P  RPSM  V++ L GE+   +IDD+
Sbjct:  510 LGDFGLARLYERGTLSETTALVGTIGYMAPELSRNGNPSSASDVFAFGVLLLEIVCGRKPTD----SGTFFLVDWVMELHANGEILSAIDPRLGSGYDGGEARLALAVGLLCCHQKPASRPSMRIVLRYLNGEENVPEIDDE 647          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.790e-19
Identity = 53/131 (40.46%), Postives = 77/131 (58.78%), Query Frame = -2
Query:  373 ISDFGLAKLIPA-NMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            +SDFGL+K  P+ + THVST V G+ GYL PEY  R Q+T K+D+YSFGV+L E V  R   N  LP ++  L E      ++R L  ++D++L G++  E   ++ ++   C  D  K RP M  V+  L
Sbjct:  660 MSDFGLSKAGPSMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARAVINPTLPKDQINLAEWALSWQKQRNLESIIDSNLRGNYSPESLEKYGEIAEKCLADEGKNRPMMGEVLWSL 790          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 9.790e-19
Identity = 50/134 (37.31%), Postives = 82/134 (61.19%), Query Frame = -2
Query:  373 ISDFGLAKLIPAN-MTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTW---DLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            +SDFGLAKL PA+  +HV+TR+ GT GY APEY   G +  K+D+++FGV+L+EI++G    N + P  ++ L++  W   +L  +  +  ++D  + G +  + A    ++ L C +  PK RP M  VV++L
Sbjct:  234 LSDFGLAKLGPADEKSHVTTRIMGTYGYAAPEYMATGHLYVKSDVFAFGVVLLEIMTGLTAHNTKRPRGQESLVD--WLRPELSNKHRVKQIMDKGIKGQYTTKVATEMARITLSCIEPDPKNRPHMKEVVEVL 365          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.790e-19
Identity = 51/137 (37.23%), Postives = 83/137 (60.58%), Query Frame = -2
Query:  355 ISDFGLAKLIPANMTHVST-RVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEKDI 762
            ++DFG A+L  ++ T   T R+AGT GY+APEY   GQ++ K+D+YSFGV+L+E++SG  N +     E + L    W  +   +  +++D  L  +    E  + +++GLLC Q+ P  RP+MS+V+  L  E +I
Sbjct:  494 VADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGERNNSF----EGEGLAAFAWKRWVEGKPEIIIDPFLI-EKPRNEIIKLIQIGLLCVQENPTKRPTMSSVIIWLGSETNI 625          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.279e-18
Identity = 54/140 (38.57%), Postives = 81/140 (57.86%), Query Frame = -2
Query:  364 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELIL-------LVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGE 762
            +SDFGLAKL+    +H++T VAGT GYLAPEY   G+ T K D+YSFGVL++E++SG      +LPT+  + +E+ +++      ++       +VD S  G  + E     L +   C   +P  RP+M  VVQ+L  E
Sbjct:  443 VSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSG------KLPTDASF-IEKGFNIVGWLNFLISENRAKEIVDLSCEG-VERESLDALLSIATKCVSSSPDERPTMHRVVQLLESE 574          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.279e-18
Identity = 52/136 (38.24%), Postives = 78/136 (57.35%), Query Frame = -2
Query:  367 ISDFGLAKLIPANMT--HVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSL--NGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMG 762
            I+DFG+A+L   + T    + R+ GT GY+APEY + GQ + K D+YSFGVL++EI+SG+ N+          L+   W  ++    + LVD  L     + +    R + +GLLC Q+    RPSM++VV ML G
Sbjct:  485 IADFGMARLFDIDHTTQRYTNRIVGTFGYMAPEYVMHGQFSFKTDVYSFGVLVLEIISGKKNSGFSSEDSMGDLISFAWRNWKEGVALNLVDKILMTMSSYSSNMIMRCINIGLLCVQEKVAERPSMASVVLMLDG 620          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.670e-18
Identity = 53/149 (35.57%), Postives = 84/149 (56.38%), Query Frame = -2
Query:  319 ISDFGLAKLIPANMTHVST-RVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEKDIDDDKITKPGLIS 762
            ++DFG+A+L   + T   T RV GT GY+APEY   GQ + K+D+YSFGV+L+E++SG  N N     E + L    W  +   EL  ++D  LN +    E  + +++GLLC Q+    RP+M++V+  L  +      K T+   ++
Sbjct:  481 VADFGMARLFNMDETRGETSRVVGTYGYMAPEYVRHGQFSAKSDVYSFGVMLLEMISGEKNKNF----ETEGLPAFAWKRWIEGELESIIDPYLN-ENPRNEIIKLIQIGLLCVQENAAKRPTMNSVITWLARDGTFTIPKPTEAAFVT 624          
The following BLAST results are available for this feature:
BLAST of CN185603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
Y5457_ARATH4.395e-1938.35Probable LRR receptor-like serine/threonine-protei... [more]
Y2296_ARATH4.395e-1941.04Probable receptor-like protein kinase At2g42960 OS... [more]
SRK6_BRAOE5.740e-1936.88Putative serine/threonine-protein kinase receptor ... [more]
LRKA1_ARATH7.496e-1938.03Lectin-domain containing receptor kinase A4.1 OS=A... [more]
Y1357_ARATH9.790e-1940.46Probable receptor-like protein kinase At1g30570 OS... [more]
CX32_ARATH9.790e-1937.31Probable serine/threonine-protein kinase Cx32, chl... [more]
CRK39_ARATH9.790e-1937.23Putative cysteine-rich receptor-like protein kinas... [more]
FEI2_ARATH1.279e-1838.57LRR receptor-like serine/threonine-protein kinase ... [more]
CRK26_ARATH1.279e-1838.24Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
CRK36_ARATH1.670e-1835.57Cysteine-rich receptor-like protein kinase 36 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001J13_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001J13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185603 ID=CN185603; Name=CN185603; organism=Citrus sinensis; type=EST; length=763bp
GAGGAAAACTTCTCCATTTACAAGAAAATACCCAGTAAGTTTTGAAATAC
CAAATGAATACAAGATTGCAAAATCTACAAGGGACAACAAAGCCTCAAAA
CCCTAAAATGAAGAAATAAATTACTATGATTTGCTTTTAAACCGAATTAA
TGTTCAAGTGCTCCTATCATATGATACTGTAAAGGTCATAGTAGCAGCAC
TCGTGGCTGCCGATGACAAATTTGAGTTGTCTGGATTGTCCGAGCTATTA
TAAGTTGATGAAGTCGTTGTTTCCAACTTAGGTTTAGGGGGACCTCTTAC
TTTGAGGTCCATGAAATCGGAAATTAATCCTGGCTTTGTTATTTTATCAT
CATCTATGTCTTTCTCACCCATCAGCATCTGGACCACAGTTGACATGGAT
GGCCGGAGCTTTGGAGTGTCTTGAGTGCAGAGAAGACCAACCTTTAGGAA
TCTACAAGCCTCCTCAGCATCAAAATCGCCATTCAATGATGTATCTACCA
GTAGTATCAACTCCCTTCGCTCATATAAATCCCATGTCCGTTCTAGAAGA
TATTGCTCTTCGGTGGGCAATCGCATATTTGTGTTACACCTCCCACTGAC
TATTTCCACAAGGAGTACACCAAAACTGTATATATCTGCTTTCCGTGTCA
CTTGCCCTCTTATTGCATACTCTGGTGCTAGATAACCTATTGTTCCAGCA
ACCCTAGTGCTAACATGAGTCATGTTGGCCGGGATAAGCTTTGCAAGACC
AAAATCTGAAATT
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