CN185603

Overview
NameCN185603
Unique NameCN185603
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.848e-18
Identity = 52/131 (39.69%), Postives = 74/131 (56.49%), Query Frame = -2
Query:  373 ISDFGLAKLIPANMTHV-STRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            I+DF L+   P     + STRV GT GY APEYA+ GQ+  K+D+YSFGV+L+E+++GR   + RLP  +Q L+          ++   VD  L GD+  +   +   V  LC Q     RP+MS VV+ L
Sbjct:  219 IADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHRLPRGQQSLVTWATPKLSEDKVKQCVDARLGGDYPPKAVAKLAAVAALCVQYEADFRPNMSIVVKAL 349          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.848e-18
Identity = 56/144 (38.89%), Postives = 83/144 (57.64%), Query Frame = -2
Query:  355 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGR--------CNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEKDI 762
            ++DFGLAK      +H++TRVAGT GYLAPEYA+ GQ+T K+D+YSFGV+++EI+ GR         + N  L T+  + L +     E  E  LL +             RFL+VG+LC      LRP++   ++ML G+ ++
Sbjct:  442 VADFGLAKQSREGESHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPNTFLITDWAWSLVKAGKTEEALEQSLLREEGSGLSNPKGIMERFLQVGILCAHVLVALRPTILDALKMLEGDIEV 585          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.848e-18
Identity = 46/131 (35.11%), Postives = 79/131 (60.31%), Query Frame = -2
Query:  373 ISDFGLAKLIPANMT-HVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            ++DFG A++   + +  ++   AGT GY+APEY   G+ + K+D+YS+GVL++EI+ G+ NT+   P   Q  +   W L++    + LVD ++  ++ +EE  R + + LLC Q+ P  RP  S ++ ML
Sbjct:  499 VADFGTARIFGMDQSVAITANAAGTPGYMAPEYMELGEFSMKSDVYSYGVLVLEIICGKRNTSFSSPV--QNFVTYVWRLWKSGTPLNLVDATIAENYKSEEVIRCIHIALLCVQEEPTDRPDFSIIMSML 627          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.859e-18
Identity = 51/132 (38.64%), Postives = 77/132 (58.33%), Query Frame = -2
Query:  373 ISDFGLAKLIP--ANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            +SDFGL+++ P  A+ THVST V GT GYL PEY  R  +T K+D+YSFGV+L+E++  R      +P E+  L+      Y R  +  ++D+ L+ D  +    +F ++ + C QD    RP M+ VV  L
Sbjct:  662 VSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQVLTEKSDVYSFGVVLLEVLCCRPIRMQSVPPEQADLIRWVKSNYRRGTVDQIIDSDLSADITSTSLEKFCEIAVRCVQDRGMERPPMNDVVWAL 793          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: IKU2_ARATH (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana GN=IKU2 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.859e-18
Identity = 53/136 (38.97%), Postives = 83/136 (61.03%), Query Frame = -2
Query:  373 ISDFGLAKLIPANMTH---VSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYE---RRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            I+DFGLAK+I A+       +  V GT+GY+APEYA   +V  K+D+YSFGV+L+E+V+G+         E   ++   W + +   R  ++ L+DTS+  ++  E+A + L + LLCT  +P+ RP M +VV ML
Sbjct:  830 IADFGLAKIIQADSVQRDFSAPLVKGTLGYIAPEYAYTTKVNEKSDVYSFGVVLMELVTGKKPLETDF-GENNDIVMWVWSVSKETNREMMMKLIDTSIEDEY-KEDALKVLTIALLCTDKSPQARPFMKSVVSML 963          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.346e-18
Identity = 50/132 (37.88%), Postives = 77/132 (58.33%), Query Frame = -2
Query:  373 ISDFGLAKLIP--ANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 762
            +SDFGL+++ P  A+ THVST V GT GYL PEY  R  +T K+D+YSFGV+L+E++  R      +P E+  L+      + +R +  ++D+ L  D  +    +F ++ + C QD    RP M+ VV  L
Sbjct:  669 VSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQILTEKSDVYSFGVVLLEVLCCRPIRMQSVPPEQADLIRWVKSNFNKRTVDQIIDSDLTADITSTSMEKFCEIAIRCVQDRGMERPPMNDVVWAL 800          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.082e-17
Identity = 52/135 (38.52%), Postives = 75/135 (55.56%), Query Frame = -2
Query:  373 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELIL--LVDTSLNGDFDAEEACRFLKVGLL---CTQDTPKLRPSMSTVVQML 762
            ++DFGL +L P     + TR+AGT GYLAPEYA+ G+VT K D+YSFGV+L+E+++GR + +   P E  +L+     +Y  +E      +DT++  D D E       V  L   C    P  RP M   V +L
Sbjct:  733 VADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMELITGRKSLDESQPEESIHLVSWFKRMYINKEASFKKAIDTTI--DLDEETLASVHTVAELAGHCCAREPYQRPDMGHAVNIL 865          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.082e-17
Identity = 53/140 (37.86%), Postives = 76/140 (54.29%), Query Frame = -2
Query:  349 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTW--DLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEKDIDD 762
            + DFGLA+L        +T V GTIGY+APE A  G  +  +D+++FGVLL+EIVSG      R PT+        W  +L    E++  +D  L   +D  EA   L VGLLC    P+ RP M  V++ L  ++D+ +
Sbjct:  507 LGDFGLARLYERGSQSCTTVVVGTIGYMAPELARNGNSSSASDVFAFGVLLLEIVSG------RKPTDSGTFFIADWVMELQASGEILSAIDPRLGSGYDEGEARLALAVGLLCCHHKPESRPLMRMVLRYLNRDEDVPE 640          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.082e-17
Identity = 51/133 (38.35%), Postives = 75/133 (56.39%), Query Frame = -2
Query:  364 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGE 762
            +SDFGLAKL+    +H++T VAGT GYLAPEY   G+ T K D+YSFGVL++E++SG+  T+     +   ++     L   +    +VD +  G    E     L +   C   +P+ RP+M  VVQ+L  E
Sbjct:  445 VSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNVVGWLKFLISEKRPRDIVDPNCEG-MQMESLDALLSIATQCVSPSPEERPTMHRVVQLLESE 576          
BLAST of CN185603 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.414e-17
Identity = 53/136 (38.97%), Postives = 79/136 (58.09%), Query Frame = -2
Query:  370 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLE-----RTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLM 762
            ++DFGLA+L+    +HVST +AGTIGY+APEY    Q T + D+YS+GVL +E+ +GR      +   E+ L+E      T ++  +   I L  T       AE+    LK+G+ CT D P+ RP+M  V+ ML+
Sbjct:  957 VTDFGLARLLNVGDSHVSTVIAGTIGYVAPEYGQTWQATTRGDVYSYGVLTMELATGR----RAVDGGEECLVEWARRVMTGNMTAKGSPITLSGTKPGN--GAEQMTELLKIGVKCTADHPQARPNMKEVLAMLV 1086          
The following BLAST results are available for this feature:
BLAST of CN185603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
Y2706_ARATH2.848e-1839.69Probable receptor-like protein kinase At2g47060 OS... [more]
Y1105_ARATH2.848e-1838.89Probable receptor-like protein kinase At1g11050 OS... [more]
CRK13_ARATH2.848e-1835.11Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
Y5900_ARATH4.859e-1838.64Putative receptor-like protein kinase At5g39000 OS... [more]
IKU2_ARATH4.859e-1838.97Receptor-like protein kinase HAIKU2 OS=Arabidopsis... [more]
Y5389_ARATH6.346e-1837.88Probable receptor-like protein kinase At5g38990 OS... [more]
TMK1_ARATH1.082e-1738.52Probable receptor protein kinase TMK1 OS=Arabidops... [more]
LRKA3_ARATH1.082e-1737.86Lectin-domain containing receptor kinase A4.3 OS=A... [more]
FEI1_ARATH1.082e-1738.35LRR receptor-like serine/threonine-protein kinase ... [more]
Y1743_ARATH1.414e-1738.97Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001J13_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001J13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185603 ID=CN185603; Name=CN185603; organism=Citrus sinensis; type=EST; length=763bp
GAGGAAAACTTCTCCATTTACAAGAAAATACCCAGTAAGTTTTGAAATAC
CAAATGAATACAAGATTGCAAAATCTACAAGGGACAACAAAGCCTCAAAA
CCCTAAAATGAAGAAATAAATTACTATGATTTGCTTTTAAACCGAATTAA
TGTTCAAGTGCTCCTATCATATGATACTGTAAAGGTCATAGTAGCAGCAC
TCGTGGCTGCCGATGACAAATTTGAGTTGTCTGGATTGTCCGAGCTATTA
TAAGTTGATGAAGTCGTTGTTTCCAACTTAGGTTTAGGGGGACCTCTTAC
TTTGAGGTCCATGAAATCGGAAATTAATCCTGGCTTTGTTATTTTATCAT
CATCTATGTCTTTCTCACCCATCAGCATCTGGACCACAGTTGACATGGAT
GGCCGGAGCTTTGGAGTGTCTTGAGTGCAGAGAAGACCAACCTTTAGGAA
TCTACAAGCCTCCTCAGCATCAAAATCGCCATTCAATGATGTATCTACCA
GTAGTATCAACTCCCTTCGCTCATATAAATCCCATGTCCGTTCTAGAAGA
TATTGCTCTTCGGTGGGCAATCGCATATTTGTGTTACACCTCCCACTGAC
TATTTCCACAAGGAGTACACCAAAACTGTATATATCTGCTTTCCGTGTCA
CTTGCCCTCTTATTGCATACTCTGGTGCTAGATAACCTATTGTTCCAGCA
ACCCTAGTGCTAACATGAGTCATGTTGGCCGGGATAAGCTTTGCAAGACC
AAAATCTGAAATT
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