CN185601

Overview
NameCN185601
Unique NameCN185601
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185601 vs. ExPASy Swiss-Prot
Match: ALDOC_PANTR (Fructose-bisphosphate aldolase C OS=Pan troglodytes GN=ALDOC PE=2 SV=3)

HSP 1 Score: 117.857 bits (294), Expect = 5.359e-26
Identity = 56/111 (50.45%), Postives = 77/111 (69.37%), Query Frame = -1
Query:  361 VRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 693
            V AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N + A   F+ R + N  A  G Y+G  + G  AA+SL++ ++ Y
Sbjct:  254 VTALRRTVPPAVPGVTFLSGGQSEEEASFNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAEAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CN185601 vs. ExPASy Swiss-Prot
Match: ALDOB_BOVIN (Fructose-bisphosphate aldolase B OS=Bos taurus GN=ALDOB PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.359e-26
Identity = 60/111 (54.05%), Postives = 70/111 (63.06%), Query Frame = -1
Query:  361 VRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 693
            V AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK EN +  Q AF+ R  ANS+A  G Y      G  + +SL    Y Y
Sbjct:  254 VTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKTTQEAFMKRALANSQAAKGQYVHMGSSGSASTQSLFTASYTY 364          
BLAST of CN185601 vs. ExPASy Swiss-Prot
Match: ALF2_LAMJA (Fructose-bisphosphate aldolase, non-muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.140e-26
Identity = 58/111 (52.25%), Postives = 75/111 (67.57%), Query Frame = -1
Query:  361 VRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 693
            V AL+RT+P+AVP + FLSGGQSEE+A+ NLNA+NQL  ++PW+LSFS+GRALQ S LKAWAG   N+  A+  F  R   N  A  G Y      G  A+ESL + ++ Y
Sbjct:  254 VTALRRTVPSAVPGITFLSGGQSEEDASLNLNAINQLPLERPWALSFSYGRALQASVLKAWAGAPANIPAAKKEFEKRAAINGLAAQGKYVPAGSSGSAASESLFIANHNY 364          
BLAST of CN185601 vs. ExPASy Swiss-Prot
Match: ALDOB_CHICK (Fructose-bisphosphate aldolase B OS=Gallus gallus GN=ALDOB PE=3 SV=3)

HSP 1 Score: 117.087 bits (292), Expect = 9.140e-26
Identity = 61/111 (54.95%), Postives = 70/111 (63.06%), Query Frame = -1
Query:  361 VRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 693
            V  L RT+PAAVP + FLSGGQSEEEA+ NLNAMNQ    KPW L+FS+GRALQ S L AW GK EN + AQ AF  R + NS A  G Y    +    A +SL    Y Y
Sbjct:  254 VTTLLRTVPAAVPGICFLSGGQSEEEASLNLNAMNQSPLPKPWKLTFSYGRALQASALAAWLGKSENKKAAQEAFCKRAQINSLACRGQYVTSGKTDTAATQSLFTASYTY 364          
BLAST of CN185601 vs. ExPASy Swiss-Prot
Match: ALF1_LAMJA (Fructose-bisphosphate aldolase, muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.194e-25
Identity = 59/109 (54.13%), Postives = 78/109 (71.56%), Query Frame = -1
Query:  361 ALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 687
            AL+RT+P AVP + FLSGGQSEE+A+ +LNA+N+L   KPW+L+FS+GRALQ S LKAW GK+EN++ AQ   + R K N +A+ G YK     G  A ESL V ++ Y
Sbjct:  256 ALRRTVPPAVPGITFLSGGQSEEDASIHLNAINKLHLIKPWALTFSYGRALQASVLKAWGGKKENLKAAQDELMRRAKINGQASKGEYK-PTGTGAAAGESLFVANHAY 363          
BLAST of CN185601 vs. ExPASy Swiss-Prot
Match: ALDOC_MACFA (Fructose-bisphosphate aldolase C OS=Macaca fascicularis GN=ALDOC PE=2 SV=3)

HSP 1 Score: 116.701 bits (291), Expect = 1.194e-25
Identity = 56/111 (50.45%), Postives = 76/111 (68.47%), Query Frame = -1
Query:  361 VRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 693
            V AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G  + G  AA+SL++ ++ Y
Sbjct:  254 VTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CN185601 vs. ExPASy Swiss-Prot
Match: ALDOC_HUMAN (Fructose-bisphosphate aldolase C OS=Homo sapiens GN=ALDOC PE=1 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.559e-25
Identity = 56/111 (50.45%), Postives = 76/111 (68.47%), Query Frame = -1
Query:  361 VRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 693
            V AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G  + G  AA+SL++ ++ Y
Sbjct:  254 VTALRRTVPPAVPGVTFLSGGQSEEEASFNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CN185601 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.036e-25
Identity = 61/111 (54.95%), Postives = 76/111 (68.47%), Query Frame = -1
Query:  361 VRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 693
            ++ L R +P AVP ++FLSGGQSE EAT+NLNAMNQ     PW +SFS+ RALQ + LK W G+ ENV+ AQ A L+R KANS A LG Y  D +  E A E + VK+Y Y
Sbjct:  281 LKLLHRRIPPAVPGIMFLSGGQSEVEATQNLNAMNQ--GPNPWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKANSLAQLGKYTSDGEAAE-AKEGMFVKNYVY 388          
BLAST of CN185601 vs. ExPASy Swiss-Prot
Match: ALF2_PLABA (Fructose-bisphosphate aldolase 2 OS=Plasmodium berghei (strain Anka) GN=ALDO2 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.036e-25
Identity = 63/111 (56.76%), Postives = 77/111 (69.37%), Query Frame = -1
Query:  361 VRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 693
            VR L+RT+P A+P V FLSGGQSEE+A+ NLN++N L    PW+L+FS+GRALQ S L  W GK+ENV KA+   L R +ANS AT G YKG A  G  A  SL+ K Y Y
Sbjct:  250 VRTLRRTVPPALPGVAFLSGGQSEEDASINLNSINVLGPH-PWALTFSYGRALQASVLNTWQGKKENVAKARRVLLQRAEANSLATYGKYKGGAG-GSTAGASLYEKKYVY 358          
BLAST of CN185601 vs. ExPASy Swiss-Prot
Match: ALDOB_MOUSE (Fructose-bisphosphate aldolase B OS=Mus musculus GN=Aldob PE=1 SV=3)

HSP 1 Score: 115.546 bits (288), Expect = 2.659e-25
Identity = 58/111 (52.25%), Postives = 69/111 (62.16%), Query Frame = -1
Query:  361 VRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 693
            V AL RT+PAAVP + FLSGG SEE+AT NLNA+N+    +PW LSFS+GRALQ S L AW GK  N +  Q AF+ R  AN +A  G Y      G  A +SL    Y Y
Sbjct:  254 VTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINRCPLPRPWKLSFSYGRALQASALAAWGGKAANKKATQEAFMKRAMANCQAAQGQYVHTGSSGAAATQSLFTASYTY 364          
The following BLAST results are available for this feature:
BLAST of CN185601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALDOC_PANTR5.359e-2650.45Fructose-bisphosphate aldolase C OS=Pan troglodyte... [more]
ALDOB_BOVIN5.359e-2654.05Fructose-bisphosphate aldolase B OS=Bos taurus GN=... [more]
ALF2_LAMJA9.140e-2652.25Fructose-bisphosphate aldolase, non-muscle type OS... [more]
ALDOB_CHICK9.140e-2654.95Fructose-bisphosphate aldolase B OS=Gallus gallus ... [more]
ALF1_LAMJA1.194e-2554.13Fructose-bisphosphate aldolase, muscle type OS=Lam... [more]
ALDOC_MACFA1.194e-2550.45Fructose-bisphosphate aldolase C OS=Macaca fascicu... [more]
ALDOC_HUMAN1.559e-2550.45Fructose-bisphosphate aldolase C OS=Homo sapiens G... [more]
ALFC_ORYSJ2.036e-2554.95Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALF2_PLABA2.036e-2556.76Fructose-bisphosphate aldolase 2 OS=Plasmodium ber... [more]
ALDOB_MOUSE2.659e-2552.25Fructose-bisphosphate aldolase B OS=Mus musculus G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001J12_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001J12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185601 ID=CN185601; Name=CN185601; organism=Citrus sinensis; type=EST; length=693bp
GAGGCCTCTTCATTTATTCAGTGAATCAGCCAAGATATAATCACATGTGA
GAAAGCAACGCATTAGAAAAGAACCGAAAGCAATAAGCACAAGAAAACAT
TATCAATTATGTGACAAAATCACAGAAATTTAGCGCCATTAGGGGAAAAG
GAAAAAAAAAACAAAAACAAAAGCATAAACAGTTTTCAGTTTAGTTTTGA
TCAAAACCACTCAAACCGAAGTTCCCAAGCTTTTTATTGCTCCACCTAAT
ATGAAAAAGCCCTAAAACTATGAATGAGAATGTGCCAACCTAATGTTCAT
ACCGCCATTTACTCTCATAAAGTTCATAAAGCACAACACCCAAAGCTTCA
ACTGTGCTTAGTATTTGTAGTCCTTGACATGGAGAGACTCTGCGGCACCT
TCACCAAGCTGGGCATCGCCCTTGTAAGTACCGAGGGTAGCCTCAGAGTT
GGCCTTGCACCTGACAAGGAAAGCAGCCTGGGCCTTCTGCACATTCTCTT
CCTTTCCAGCCCATGCCTTGAGAGTGCTCTGCTGAAGTGCACGTCCAAAG
GAAAAGGAAAGTGACCATGGCTTCTTCGTCTTGAGCTGGTTCATGGCATT
AAGGTTGCGGGTAGCCTCCTCCTCACTCTGCCCACCAGACAAGAACACAA
CAGCAGGAACTGCTGCAGGCATAGTGCGTTGCAGGGCCCGGAC
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