CN185599
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185599 vs. ExPASy Swiss-Prot
Match: ARP6_YARLI (Actin-like protein ARP6 OS=Yarrowia lipolytica GN=ARP6 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.898e-12 Identity = 52/197 (26.40%), Postives = 92/197 (46.70%), Query Frame = 3 Query: 114 LVCDNGTGMVKAGFAGD-DAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL--KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTG--IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYS 689 ++ DNG+ +K+ GD + P A+ I GR K YVG + + +L K P E G + NWD + +W + FYN + +LLT+ PL + Q++FE + + A L ++SG+ +V+D+G +H P+ G I R+++ G+ +T+ L + ++ R Y+ Sbjct: 1 MILDNGSYAIKSDRTGDAETPNAL---IRGR-----------DKTVYVGQDLTKCKDYASLVFKRPSEKGQLINWDIQKAVWDNLFYNPQTGVDTDSSLLLTQYPLTLPQVSANIDQVVFEEYGFEQYHRTEAANLVAWSSGQCLDACLVVDAGFNATHVTPVLFGQVHEPGIRRVNVGGKTMTNLLKETVSFRHYN 183
BLAST of CN185599 vs. ExPASy Swiss-Prot
Match: ARP5_DROME (Actin-related protein 5 OS=Drosophila melanogaster GN=Arp5 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.898e-12 Identity = 46/206 (22.33%), Postives = 96/206 (46.60%), Query Frame = 3 Query: 114 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPR-----HTGVMVGMGQK-------DAYVGDEAQSKRGILT-LKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLS-----LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKIL 671 LV DNG+ + G++ P F +++ +PR G + + VG++ + + LK P E +++NW+ E+I+ + F + +HP++LTEA NP R++M +++FE + P++ I A+ S + +++ G +H +P+ +G + RL++ G + +L +++ Sbjct: 7 LVIDNGSYECRVGWSDSKEPDLRFRNVLTKPRKDRKKEAAASEGSASQTTVEQSAEIQVGNDITNIEAVRAHLKSPFERNVITNWNHQEQIFDYIFTKMGFDGQDKIDHPIILTEALANPNFCRQQMNELLFECYGIPSVSYGIDALYSWKHHQQKQKNISDALIISFGYSTTHVIPVLDGKLQLEHVRRLNVGGYHIITYLFRLM 212
BLAST of CN185599 vs. ExPASy Swiss-Prot
Match: ARP6_MOUSE (Actin-related protein 6 OS=Mus musculus GN=Actr6 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11 Identity = 52/195 (26.67%), Postives = 92/195 (47.18%), Query Frame = 3 Query: 114 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNEL-RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTG-----IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTER 680 LV DNG K G++ D +V P+ R + + + DE + G+ + P + G + NWD ++W + F E+ +V + +++TE N + +E M +I+FE + A+ LS + R I++DSG +H VP AI+R+++ G+ LT+HL +I++ R Sbjct: 4 LVLDNGAYNAKIGYSHDSV--SVIPNCQFRSKTARLKTFTANQI----DEIKDPSGLFYI-LPFQKGYLVNWDVQRQVWDYLFGKEMYQVDFLDTNIIITEPYFNFTSIQESMNEILFEEYQFQAVLRVNAGALSAHRYFRDNPSELCCIIVDSGYSFTHIVPYCRSKKKKEAIIRINVGGKLLTNHLKEIISYR 191
BLAST of CN185599 vs. ExPASy Swiss-Prot
Match: ARP5_DROPS (Actin-related protein 5 OS=Drosophila pseudoobscura pseudoobscura GN=Arp5 PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.823e-11 Identity = 51/215 (23.72%), Postives = 102/215 (47.44%), Query Frame = 3 Query: 96 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHT-----------GVMVGMGQK---DAYVGDEAQSKRGILT-LKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE---HPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSL--YASGR---TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKIL 671 G + LV DNG+ + G+ P F +++ +PR G + + + VG++ + + LK P E I++NW+ E+I+ + F ++ E+ +P++LTEA NP R+ M++++FE + PA+ I A+ S Y + R + +++ G +H +P+ G + RL++ G + +L+ ++ Sbjct: 2 GSPKRVLVIDNGSYECRVGWNNTKEPALRFRNVLTKPRKDRKKEAIPDTTDGAPTPVAAEVPAEIQVGNDITNIEAVRAHLKSPFERNIITNWNHQEQIFDYIF-TKMGFEGEQSIANPIVLTEALANPNFCRQNMSELLFECYGIPAVSYGIDALYSWEHYQNRRKKVSDALIISLGYSTTHVIPVLNGKLQLQHVRRLNVGGYHIITYLLCLM 215
BLAST of CN185599 vs. ExPASy Swiss-Prot
Match: ARP6_HUMAN (Actin-related protein 6 OS=Homo sapiens GN=ACTR6 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.993e-11 Identity = 51/195 (26.15%), Postives = 93/195 (47.69%), Query Frame = 3 Query: 114 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNEL-RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTG-----IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTER 680 LV DNG K G++ ++ +V P+ R + + + DE + G+ + P + G + NWD ++W + F E+ +V + +++TE N + +E M +I+FE + A+ LS + R I++DSG +H VP AI+R+++ G+ LT+HL +I++ R Sbjct: 4 LVLDNGAYNAKIGYSHENV--SVIPNCQFRSKTARLKTFTANQI----DEIKDPSGLFYI-LPFQKGYLVNWDVQRQVWDYLFGKEMYQVDFLDTNIIITEPYFNFTSIQESMNEILFEEYQFQAVLRVNAGALSAHRYFRDNPSELCCIIVDSGYSFTHIVPYCRSKKKKEAIIRINVGGKLLTNHLKEIISYR 191
BLAST of CN185599 vs. ExPASy Swiss-Prot
Match: ARP9_SCHPO (SWI/SNF and RSC complexes subunit arp9 OS=Schizosaccharomyces pombe GN=arp9 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.521e-11 Identity = 42/130 (32.31%), Postives = 63/130 (48.46%), Query Frame = 3 Query: 300 PIEHGIVSNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTE 677 PI+ G V +W+ ++ W H Y+ L P + +PV L +RE TQ FE P +A + ++ LYA G G+V+D G + PI +G + A +L L GR +T HL +L E Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFEECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTATQQLPLGGRYMTQHLQNLLRE 241
BLAST of CN185599 vs. ExPASy Swiss-Prot
Match: ARP6_CHICK (Actin-related protein 6 OS=Gallus gallus GN=ACTR6 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11 Identity = 52/195 (26.67%), Postives = 92/195 (47.18%), Query Frame = 3 Query: 114 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNEL-RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTG-----IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTER 680 LV DNG K G++ A +V P+ R + + + DE + G+ + P + G + NWD ++W + F E+ +V + +++TE N + +E M +I+FE + A+ LS + R I++DSG +H VP AI+R+++ G+ LT+HL +I++ R Sbjct: 4 LVLDNGAYNAKIGYS--HAHVSVIPNCQFRSKTARLKTFTANQL----DEIKDPSGLFYI-LPFQKGYLVNWDVQRQVWDYLFGKEMYQVDFVDTNIIITEPYFNFSSIQESMNEILFEEYQFQAVLRVNAGALSAHRYFRDNPSELCCIIVDSGYSFTHIVPYCRSKKKKEAIIRINVGGKLLTNHLKEIISYR 191 The following BLAST results are available for this feature:
BLAST of CN185599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 477
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185599 ID=CN185599; Name=CN185599; organism=Citrus sinensis; type=EST; length=705bpback to top |