CN185593

Overview
NameCN185593
Unique NameCN185593
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: FTSH4_SYNY3 (Cell division protease ftsH homolog 4 OS=Synechocystis sp. (strain PCC 6803) GN=slr1604 PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.459e-40
Identity = 82/193 (42.49%), Postives = 124/193 (64.25%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA 584
            A+A A +    F  ++G + V+MF+G GA  VRD F+ AK  +PCI+FIDEIDA+G +R      G+ E ++T+ +LL ++DGF  +  I ++AATNR D+LD ALMR GR DR++ +  P    R  IL +H+R  T+  DV+ +++AR T  F GA L  +  EA +LA RR+ TE++ ++ N+ I +V A
Sbjct:  211 AKAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKANAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNTGIIIVAATNRPDVLDSALMRPGRFDRQVVVDRPDYAGRREILNVHARGKTLSQDVDLDKIARRTPGFTGADLSNLLNEAAILAARRNLTEISMDEVNDAIDRVLA 403          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: FTSH_MEDSA (Cell division protease ftsH homolog, chloroplastic OS=Medicago sativa GN=FTSH PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.194e-40
Identity = 81/193 (41.97%), Postives = 124/193 (64.25%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA 584
            ARA A +    F   A  + V++F+G GA  VRD F+ AK K+PCI+FIDEIDA+G +R      G+ E ++T+ +LL ++DGFS +  + V+AATNR D+LD AL+R GR DR++ +  P    R +ILQ+HSR   +  DV+F+++AR T  F G  L+ +  EA +LA RRD  E++ ++  + + ++ A
Sbjct:  303 ARAVAGEAGTPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFDKIARRTPGFTGVDLQNLMNEAAILAARRDLKEISKDEIADALERIIA 495          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: FTSH5_ARATH (Cell division protease ftsH homolog 5, chloroplastic OS=Arabidopsis thaliana GN=FTSH5 PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.194e-40
Identity = 80/193 (41.45%), Postives = 126/193 (65.28%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA 584
            ARA A +    F   A  + V++F+G GA  VRD F+ AK K+PCI+FIDEIDA+G +R      G+ E ++T+ +LL ++DGFS +  + V+AATNR D+LD AL+R GR DR++ +  P    R +IL++HSR   +  DV++E++AR T  F GA L+ +  EA +LA RR+  E++ ++ ++ + ++ A
Sbjct:  300 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEISDALERIIA 492          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: FTSH_CAPAN (Cell division protease ftsH homolog, chloroplastic (Fragment) OS=Capsicum annuum GN=FTSH PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.477e-40
Identity = 81/193 (41.97%), Postives = 125/193 (64.77%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA 584
            ARA A +    F   A  + V++F+G GA  VR  F+ AK K+PCI+FIDEIDA+G +R      G+ E ++T+ +LL ++DGFS +  + V+AATNR D+LD AL+R G+ DR++ +  P    R RILQ+HSR   +  DV+F+++AR T  F GA L+ +  EA +LA RRD  E++ ++ ++ + ++ A
Sbjct:  280 ARAVAGEAGVPFFSCAASEFVELFVGVGASRVRHLFENAKSKAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGKFDRQVTVDRPDVAGRVRILQVHSRGKALAKDVDFDKIARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIA 472          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: FTSH_AQUAE (Cell division protease ftsH homolog OS=Aquifex aeolicus GN=ftsH PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.477e-40
Identity = 86/192 (44.79%), Postives = 124/192 (64.58%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR-EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 578
            A+A A + +  F+ ++G   V+MF+G GA  VRD F+ AK+ +PCIIFIDEIDA+G  R    V G   E ++T+ +LL ++DGF + D I VIAATNR DILDPAL+R GR DR+I +P P    R  IL++H+R   +  DV+ E +AR+T  F GA L+ +  EA +LA R+   E+  E+  E + ++
Sbjct:  205 AKAIAGEAHVPFISVSGSDFVEMFVGVGAARVRDLFETAKKHAPCIIFIDEIDAVGRARGAIPVGGGHDEREQTLNQLLVEMDGFDTSDGIIVIAATNRPDILDPALLRPGRFDRQIFIPKPDVRGRYEILKVHARNKKLAKDVDLEFVARATPGFTGADLENLLNEAALLAARKGKEEITMEEIEEALDRI 396          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: FTSH_BACSU (Cell division protease ftsH homolog OS=Bacillus subtilis GN=ftsH PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.637e-39
Identity = 81/193 (41.97%), Postives = 125/193 (64.77%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA 584
            A+ACA +    F  ++G   V+MF+G GA  VRD F+ AK+ +PC+IFIDEIDA+G +R      G  E ++T+ +LL ++DGFS+++ I +IAATNRADILDPAL+R GR DR+I +  P    R  +L++H+R   +   VN + +A  T  F+GA L+ +  EA ++A R++  +++  D +E   +V A
Sbjct:  211 AKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQITVDRPDVIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAALVAARQNKKKIDARDIDEATDRVIA 403          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: FTSH_CYAME (Cell division protease ftsH homolog OS=Cyanidioschyzon merolae GN=ftsH PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.349e-38
Identity = 79/193 (40.93%), Postives = 126/193 (65.28%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA 584
            A+A A + +  F  ++G + V+MF+G GA  VRD F+ AK+ +PC++FIDEIDA+G +R      G+ E ++T+ +LL ++DGF  +  + VIAATNR D+LD AL+R GR DR+I +  P  ++R  IL++H+ +  +HP V+ E +AR T  F GA L  +  EA +LA+RR   ++  ++ ++ I +V A
Sbjct:  204 AKAIAGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKAKQNAPCLVFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRVDVLDAALLRPGRFDRQIMVSMPDVKSRIAILKVHANQKKLHPQVSLEAVARRTAGFAGADLANLLNEAAILAVRRGLKQITWKEIDDAIDRVIA 396          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: FTSH2_ORYSJ (Cell division protease ftsH homolog 2, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH2 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.744e-38
Identity = 84/216 (38.89%), Postives = 125/216 (57.87%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN----------EGIIQVQAKKKASLNYYA*TH 623
            A+A A +    F  ++G + V+MF+G GA  VRD F+ AKE +PCI+F+DEIDA+G +R      G+ E ++T+ +LL ++DGF  +  I VIAATNRADILD AL+R GR DR++ +  P    R  IL++H        DV+ E +A  T  F+GA L  +  EA +LA RR  T ++ ++ +          EG +    K K+ + Y+   H
Sbjct:  264 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDTDVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGRTAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGH 479          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: Y1297_ARCFU (Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus fulgidus GN=AF_1297 PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.492e-37
Identity = 85/182 (46.70%), Postives = 123/182 (67.58%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHE 551
            A+A A + +A F+ ++GP+++  + G+  + +R+ F+ AKE +P IIFIDEID+I  KR   EV+G+ E +R + +LL  +DG  +   + VIAATNR D +DPAL R GR DR+IE+  P +E R  IL+IH+RKM +  DV+ EELA  T+ F GA L+A+C EA M ALRR   E++ E
Sbjct:  233 AKAVANEVDAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKR--EEVTGEVE-RRVVAQLLALMDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILEIHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMHALRRVLPEIDIE 411          

HSP 2 Score: 156.377 bits (394), Expect = 1.492e-37
Identity = 81/197 (41.12%), Postives = 125/197 (63.45%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKA 596
            A+A A ++NA F+ + GP+L+  ++G+  K VR+ F+ A++ +PC+IF DEID++  +R    +      +R + +LL +LDG      + VIAATNR D++DPAL+R GRL+R I +P P ++AR  I +IH R   +  DVN EELA  T+ ++GA ++AVC EAGMLA+R        E    G+ + +AK+ A
Sbjct:  506 AKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCVIFFDEIDSLAPRR--GGIGDSHVTERVVSQLLTELDGLEELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNIEELAEKTEGYSGADIEAVCREAGMLAIR--------ELIKPGMTREEAKEAA 692          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: FSTH_PORYE (Cell division protease ftsH homolog OS=Porphyra yezoensis GN=ftsH PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.492e-37
Identity = 79/193 (40.93%), Postives = 121/193 (62.69%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA 584
            A+A A + +  F  ++G + V+MF+G GA  VRD F+ AK+ +PCI+FIDEIDA+G +R      G+ E ++T+ +LL ++DGF  +  + VIAATNRADILD AL+R GR DR++ +  P  + R  IL++H++   + P V+ E +AR T  F+GA L  +  EA +L  RR    +   + +  I +V A
Sbjct:  223 AKAIAGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKAKDNAPCIVFIDEIDAVGRQRGTGVGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRADILDSALLRPGRFDRQVSVDVPDFKGRLAILEVHAKNKKMEPKVSLETIARRTPGFSGADLANLLNEAAILTARRRKNAMTMSEIDTSIDRVVA 415          
The following BLAST results are available for this feature:
BLAST of CN185593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 377
Match NameE-valueIdentityDescription
FTSH4_SYNY32.459e-4042.49Cell division protease ftsH homolog 4 OS=Synechocy... [more]
FTSH_MEDSA4.194e-4041.97Cell division protease ftsH homolog, chloroplastic... [more]
FTSH5_ARATH4.194e-4041.45Cell division protease ftsH homolog 5, chloroplast... [more]
FTSH_CAPAN5.477e-4041.97Cell division protease ftsH homolog, chloroplastic... [more]
FTSH_AQUAE5.477e-4044.79Cell division protease ftsH homolog OS=Aquifex aeo... [more]
FTSH_BACSU4.637e-3941.97Cell division protease ftsH homolog OS=Bacillus su... [more]
FTSH_CYAME1.349e-3840.93Cell division protease ftsH homolog OS=Cyanidiosch... [more]
FTSH2_ORYSJ8.744e-3838.89Cell division protease ftsH homolog 2, chloroplast... [more]
Y1297_ARCFU1.492e-3746.70Cell division cycle protein 48 homolog AF_1297 OS=... [more]
FSTH_PORYE1.492e-3740.93Cell division protease ftsH homolog OS=Porphyra ye... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001J07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001J07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185593 ID=CN185593; Name=CN185593; organism=Citrus sinensis; type=EST; length=736bp
GAGGGGCTCGTGCTTGTGCAGCACAAACAAATGCTACCTTTTTGAAGCTC
GCAGGCCCTCAACTAGTCCAGATGTTCATTGGAGATGGAGCCAAACTAGT
TCGTGATGCCTTTCAACTTGCAAAGGAGAAGTCCCCCTGCATTATTTTCA
TCGACGAAATTGACGCAATTGGTACAAAGCGGTTTGACAGTGAAGTGAGT
GGAGACAGGGAGGTGCAGCGAACTATGTTAGAGTTGCTCAATCAGCTCGA
TGGATTTAGCAGCGATGATCGGATTAAGGTCATAGCAGCAACAAATCGTG
CTGATATCCTGGACCCTGCTCTTATGCGATCTGGCCGTTTGGATCGCAAG
ATCGAGTTACCACATCCGAGTGAGGAAGCTAGAGCTCGCATTTTGCAAAT
CCATTCGAGGAAGATGACTGTTCACCCGGATGTCAACTTCGAAGAACTTG
CTCGATCCACTGACGATTTCAATGGGGCACAACTAAAAGCTGTTTGTGTT
GAAGCAGGGATGCTTGCTCTTCGCCGTGATGCGACTGAGGTCAACCATGA
GGATTTCAATGAAGGTATCATTCAGGTGCAGGCTAAGAAAAAGGCTAGCT
TAAACTACTATGCATAGACACATCCAAAGGCGAAGTTTTAGCCTCTACTT
CAATTGGTAATTAATATATTTTGGGTTGAATATTAAAAAATGGGTATTAA
ACATTGTCTTTGTACTGTACATAATATGTTATAATA
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