CN185593

Overview
NameCN185593
Unique NameCN185593
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: Y1156_METJA (Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus jannaschii GN=MJ1156 PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.948e-37
Identity = 79/173 (45.66%), Postives = 115/173 (66.47%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 524
            A+A A ++ A F+ + GP++   ++G+  K +R+ F+ A++ +PCIIF DEIDAI  KR     S   +  + + +LL +LDG      + VIAATNR DI+DPAL+R GRLDR I +P P E+AR  I +IH+R M +  DVN EELA+ T+ + GA ++A+C EA MLA+R
Sbjct:  503 AKAVANESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPKRGRDLSSAVTD--KVVNQLLTELDGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTGADIEALCREAAMLAVR 673          

HSP 2 Score: 139.043 bits (349), Expect = 2.464e-32
Identity = 84/209 (40.19%), Postives = 118/209 (56.46%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR-----------------DATEVNHEDFNEGIIQVQ 581
            A+A A +  A F  + GP+++  ++G+  + +R  F+ A+E +P IIFIDEIDAI  KR   E +G+ E +R + +LL  +DG     ++ VI ATNR + LDPAL R GR DR+I +  P  E R  ILQIH+R M +  DV+ + LA  T  F GA L A+C EA M ALRR                 D  +V  +DF E +  V+
Sbjct:  230 AKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKR--DEATGEVE-RRLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALRRVLPSIDLEAEEIPKEVLDNLKVTMDDFKEALKDVE 435          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: FTSH1_SYNY3 (Cell division protease ftsH homolog 1 OS=Synechocystis sp. (strain PCC 6803) GN=slr0228 PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.948e-37
Identity = 78/193 (40.41%), Postives = 121/193 (62.69%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA 584
            A+A A +    F  ++G + V+MF+G GA  VRD F+ AKE +PC+IFIDEIDA+G +R      G+ E ++T+ +LL ++DGF  +  I +IAATNR D+LD ALMR GR DR++ +  P    R  IL++H+R   + P+V+ + +AR T  F+GA L  +  EA +L  RR  + +   + ++ + +V A
Sbjct:  222 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSAITLLEIDDAVDRVVA 414          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: VAT_THEAC (VCP-like ATPase OS=Thermoplasma acidophilum GN=vat PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.544e-37
Identity = 78/190 (41.05%), Postives = 127/190 (66.84%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR--DATEVNHEDFNEGI 569
            A+A A ++NA F+ + GP+++  ++G+  K +R+ F+ AK+ +P I+F+DEID+I  +R  +  SG  E  R + +LL  LDG    + + VI ATNR DI+DPAL+R+GR D+ I +P P +EAR  IL++H++ M + PDV+  ++A+ T+ + GA L+ +C EAGM A R   DAT V+ ++F + +
Sbjct:  518 AKAVATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPRRGTTSDSGVTE--RIVNQLLTSLDGIEVMNGVVVIGATNRPDIMDPALLRAGRFDKLIYIPPPDKEARLSILKVHTKNMPLAPDVDLNDIAQRTEGYVGADLENLCREAGMNAYRENPDATSVSQKNFLDAL 705          

HSP 2 Score: 128.257 bits (321), Expect = 4.350e-29
Identity = 77/185 (41.62%), Postives = 107/185 (57.84%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTV-----HPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVN 545
            ARA A ++ A FL + GP+++  + G   + +R+ F  A+E +P IIFIDEID+I  KR   EV G+ E +R + +LL  +DG      + VI ATNR D +DPAL R GR DR+IE+  P    R  IL IH+R M +       +   EE+A  T  F GA L A+  E+ M ALRR   E++
Sbjct:  241 ARAVANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKR--EEVQGEVE-RRVVAQLLTLMDGMKERGHVIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRNGRKEILMIHTRNMPLGMSEEEKNKFLEEMADYTYGFVGADLAALVRESAMNALRRYLPEID 422          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: AFG32_BOVIN (AFG3-like protein 2 OS=Bos taurus GN=AFG3L2 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.544e-37
Identity = 79/195 (40.51%), Postives = 121/195 (62.05%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARS----TDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 578
            A+A A + N  F+ ++G + ++MF+G G   VRD F LA++ +PCI+FIDEIDA+G KR      G  E + T+ +LL ++DGF++   + ++A TNR DILDPALMR GR DR+I +  P  + RA I ++H R + +   +  E+LAR     T  F+GA +  VC EA ++A R  +  +N + F + I +V
Sbjct:  359 AKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERV 553          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: FTSH2_ARATH (Cell division protease ftsH homolog 2, chloroplastic OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.323e-37
Identity = 82/216 (37.96%), Postives = 127/216 (58.80%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN----------EGIIQVQAKKKASLNYYA*TH 623
            A+A A +    F  ++G + V+MF+G GA  VRD F+ AKE +PCI+F+DEIDA+G +R      G+ E ++T+ +LL ++DGF  +  + V+AATNRADILD AL+R GR DR++ +  P  + R  IL++H+       DV+ E +A  T  F+GA L  +  EA +LA RR  T ++ ++ +          EG +    K K+ + Y+   H
Sbjct:  277 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHAGNKKFDNDVSLEIIAMRTPGFSGADLANLLNEAAILAGRRARTSISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGH 492          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: FTSH8_ARATH (Cell division protease ftsH homolog 8, chloroplastic OS=Arabidopsis thaliana GN=FTSH8 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.340e-37
Identity = 82/216 (37.96%), Postives = 126/216 (58.33%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN----------EGIIQVQAKKKASLNYYA*TH 623
            A+A A +    F  ++G + V+MF+G GA  VRD F+ AKE +PCI+F+DEIDA+G +R      G+ E ++T+ +LL ++DGF  +  + V+AATNRADILD AL+R GR DR++ +  P  + R  IL++HS        V+ E +A  T  F+GA L  +  EA +LA RR  T ++ ++ +          EG +    K K+ + Y+   H
Sbjct:  270 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHSGNKKFESGVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGKTAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGH 485          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: FTSH_MYCPN (Cell division protease ftsH homolog OS=Mycoplasma pneumoniae GN=ftsH PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.668e-37
Identity = 82/193 (42.49%), Postives = 123/193 (63.73%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA 584
            A+A A +    F +  G     M +G GAK VRD F  AK+ +PCIIFIDEID++G+KR   E+S    V++T+ +LL ++DGF+S   + V+AATNR D+LD AL+R GR DR I++  P  + R  ILQ+H++   +   ++  ++A+ T  F+GAQL+ V  EA +LA+R + T +N  D +E I +V A
Sbjct:  278 AKAVAGEAGVPFFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPCIIFIDEIDSVGSKRGRVELSSYSVVEQTLNQLLAEMDGFTSRTGVVVMAATNRLDVLDDALLRPGRFDRHIQINLPDIKEREGILQVHAKNKNLSSKISLLDVAKRTPGFSGAQLENVINEATLLAVRDNRTTINMNDIDEAIDRVIA 470          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: FTSH2_SYNY3 (Cell division protease ftsH homolog 2 OS=Synechocystis sp. (strain PCC 6803) GN=slr1390 PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.668e-37
Identity = 79/193 (40.93%), Postives = 117/193 (60.62%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA 584
            A+A A +    F  ++G + V+MF+G GA  VRD F+ AKE +PC++FIDEIDA+G +R      G+ E ++T+ +LL ++DGF  +  I VIAATNR D+LD AL+R GR DR++ + +P  + R  IL IH++   +H +V    +AR T  F GA L  V  EA +   RR    +   + N+ I +V A
Sbjct:  261 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLVFIDEIDAVGRQRGVGYGGGNDEREQTLNQLLTEMDGFEGNSGIIVIAATNRPDVLDLALLRPGRFDRQVTVDYPDVQGRELILAIHAQNKKLHEEVQLAAIARRTPGFTGADLANVLNEAAIFTARRRKEAITMAEVNDAIDRVVA 453          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: FTSH1_HAEIN (Cell division protease ftsH homolog 1 OS=Haemophilus influenzae GN=ftsH-A PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.668e-37
Identity = 80/186 (43.01%), Postives = 118/186 (63.44%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 563
            ARA A +    F  ++G   V+MF+G GA  VRD F+ AK+ +PC+IFIDEIDA+G +R      G  E ++T+ ++L ++DGFS +D + VIAATNR D+LDPAL R GR DR++ +  P  + R +IL++H RK++V  DV+   LAR T  ++GA L  +  EA + A R +   V   +F +
Sbjct:  201 ARAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFEK 386          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: AFG32_HUMAN (AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 1.263e-36
Identity = 77/195 (39.49%), Postives = 121/195 (62.05%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARS----TDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 578
            A+A A + N  F+ ++G + ++MF+G G   VRD F LA++ +PCI+FIDEIDA+G KR      G  E + T+ +LL ++DGF++   + ++A TNR DILDPAL+R GR DR+I +  P  + RA I ++H R + +   +  ++LAR     T  F+GA +  VC EA ++A R  +  +N + F + I +V
Sbjct:  358 AKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERV 552          
The following BLAST results are available for this feature:
BLAST of CN185593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 377
Match NameE-valueIdentityDescription
Y1156_METJA1.948e-3745.66Cell division cycle protein 48 homolog MJ1156 OS=M... [more]
FTSH1_SYNY31.948e-3740.41Cell division protease ftsH homolog 1 OS=Synechocy... [more]
VAT_THEAC2.544e-3741.05VCP-like ATPase OS=Thermoplasma acidophilum GN=vat... [more]
AFG32_BOVIN2.544e-3740.51AFG3-like protein 2 OS=Bos taurus GN=AFG3L2 PE=2 S... [more]
FTSH2_ARATH3.323e-3737.96Cell division protease ftsH homolog 2, chloroplast... [more]
FTSH8_ARATH4.340e-3737.96Cell division protease ftsH homolog 8, chloroplast... [more]
FTSH_MYCPN5.668e-3742.49Cell division protease ftsH homolog OS=Mycoplasma ... [more]
FTSH2_SYNY35.668e-3740.93Cell division protease ftsH homolog 2 OS=Synechocy... [more]
FTSH1_HAEIN9.668e-3743.01Cell division protease ftsH homolog 1 OS=Haemophil... [more]
AFG32_HUMAN1.263e-3639.49AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001J07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001J07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185593 ID=CN185593; Name=CN185593; organism=Citrus sinensis; type=EST; length=736bp
GAGGGGCTCGTGCTTGTGCAGCACAAACAAATGCTACCTTTTTGAAGCTC
GCAGGCCCTCAACTAGTCCAGATGTTCATTGGAGATGGAGCCAAACTAGT
TCGTGATGCCTTTCAACTTGCAAAGGAGAAGTCCCCCTGCATTATTTTCA
TCGACGAAATTGACGCAATTGGTACAAAGCGGTTTGACAGTGAAGTGAGT
GGAGACAGGGAGGTGCAGCGAACTATGTTAGAGTTGCTCAATCAGCTCGA
TGGATTTAGCAGCGATGATCGGATTAAGGTCATAGCAGCAACAAATCGTG
CTGATATCCTGGACCCTGCTCTTATGCGATCTGGCCGTTTGGATCGCAAG
ATCGAGTTACCACATCCGAGTGAGGAAGCTAGAGCTCGCATTTTGCAAAT
CCATTCGAGGAAGATGACTGTTCACCCGGATGTCAACTTCGAAGAACTTG
CTCGATCCACTGACGATTTCAATGGGGCACAACTAAAAGCTGTTTGTGTT
GAAGCAGGGATGCTTGCTCTTCGCCGTGATGCGACTGAGGTCAACCATGA
GGATTTCAATGAAGGTATCATTCAGGTGCAGGCTAAGAAAAAGGCTAGCT
TAAACTACTATGCATAGACACATCCAAAGGCGAAGTTTTAGCCTCTACTT
CAATTGGTAATTAATATATTTTGGGTTGAATATTAAAAAATGGGTATTAA
ACATTGTCTTTGTACTGTACATAATATGTTATAATA
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